Device and method for accelerated material extraction and detection
A method and device are provided for detecting a target in a biological sample. The target binds to a solid phase substrate. First and second cavities in a plate are filled with an oil. The first and second cavities are in fluid communication with each other. The solid phase substrate is magnetically drawn sequentially from a drop of the biological sample in the first cavity, through the oil, into a drop of the reaction solution in the second cavity. A change in a parameter of the drop of the reaction solution indicates the presence of the target.
1 . A device for detecting a target in a biological sample, the target being connectable to a solid phase substrate, the device comprising:
a plate having upper and lower surfaces and including:
first, second and third spaced wells in the plate, each of the first, second and third spaced wells defining corresponding cavities which are fluidly connected and have dimensions;
a first collar projecting from the upper surface of the plate and defining a non-circular opening in communication with the cavity defined by the second well, the first collar configured to prevent a pipetting mechanism from engaging a bottom surface partially defining the cavity defined by the second well;
a magnetic manipulation plate including an upper surface defining a microfluidic plate receipt cavity for removably receiving the plate therein, the plate slidable within the microfluidic plate receipt cavity between a first binding position, a second position and a detection position; and
a magnet force generator for generating a magnetic force for attracting the solid phase substrate;
wherein:
the magnet force generator is axially aligned with the cavity defined by the first well with the plate in the first binding position;
the magnet force generator is axially aligned with the cavity defined by the second well with the plate in the second position; and
the magnet force generator is axially aligned with the cavity defined by the third well with the plate in the third detection position.
2 . The device of claim 1 further comprising oil received in the cavities defined by of the first, second and third wells.
3 . The device of claim 2 further comprising a drop of an aqueous solution received in the cavity defined by the second well and a drop of reaction solution in the cavity defined by the third well.
4 . The device of claim 3 wherein the cavity defined by the first well is adapted for receiving a drop of the biological sample including solid phase substrate therein, the solid phase substrate being attracted to the magnetic force generated by the magnet with the plate in the first binding position.
5 . The device of claim 4 wherein the magnetic force generator draws the solid phase substrate from the drop of the biological sample, through the oil and into the drop of the aqueous solution as the plate moves from the first binding position to the second position.
6 . The device of claim 5 wherein the magnetic force generator draws the solid phase substrate from the drop of the aqueous solution, through the oil and into the drop of isothermal reaction solution as the plate moves from the second position to the third detection position.
7 . The device of claim 4 wherein:
the drop of aqueous solution and the oil have a first interfacial tension, the drop of aqueous solution and the plate have a second interfacial tension, and the oil and the plate have a third interfacial tension;
the second interfacial tension is greater than or equal to the sum of the first interfacial tension and the third interfacial tension, thereby giving rise to liquid repellency between the drop of aqueous solution and the plate;
the drop of reaction solution and the oil have a fourth interfacial tension and the drop of reaction solution and the plate have a fifth interfacial tension;
the fifth interfacial tension is greater than or equal to the sum of the fourth interfacial tension and the third interfacial tension, thereby giving rise to liquid repellency between the drop of reaction solution and the plate;
the drop of the biological sample and the oil have a sixth interfacial tension and the drop of the biological sample and the plate have a seventh interfacial tension; and
the seventh interfacial tension is greater than or equal to the sum of the sixth interfacial tension and the third interfacial tension, thereby giving rise to liquid repellency between the drop of the biological sample and the plate.
8 . The device of claim 1 wherein the plate includes a fourth well defining a cavity, the fourth well disposed between and in fluid communication with the cavities defined by the second and third wells.
9 . The device of claim 8 wherein:
oil is received in the cavities defined by the first, second, third and fourth wells; and
a drop of a first aqueous solution received in the cavity defined by the second well, a drop of a second aqueous solution received in the cavity defined by the fourth well, and a drop of isothermal reaction solution in the cavity defined by the third well.
10 . The device of claim 1 wherein the plate includes a second collar projecting from the upper surface of the plate and defining a non-circular opening in communication with the cavity defined by the third well.
11 . The device of claim 1 wherein the dimension of the cavity defined by the first well is greater than the dimensions of the cavities defined by the second and third spaced wells.
12 . The device of claim 1 wherein the first, second and third wells are defined by corresponding well surfaces, the well surfaces being hydrophobic.
13 . A device for detecting a target in a biological sample, the target being connectable to a solid phase substrate, the device comprising:
a plate having upper and lower surfaces and including:
first, second and third spaced wells in the plate, each of the first, second and
third spaced wells defining corresponding cavities which are fluidly connected and
have dimensions;
a first channel interconnecting the cavity defined by the first well with the cavity defined by the second well;
a second channel interconnecting the cavity defined by the second well with the cavity defined by the third well; and
a first collar projecting from the upper surface of the plate and defining a non-circular opening in communication with the cavity defined by the second well, the first collar configured to prevent a pipetting mechanism from depositing a fluid directly into the first and second channels; and
a magnet force generator for generating a magnetic force for attracting the solid phase substrate, one of the magnetic force generator and the plate being movable between a first position wherein the magnetic force generator is aligned with the first well, a second position wherein the magnetic force generator is aligned with a second well, and a third position wherein the magnetic force generator is aligned with the third well;
wherein:
the well surfaces include a bottom surface; and
the first collar is configured to prevent the pipetting mechanism from engaging the bottom surface of the second well.
14 . The device of claim 13 further comprising a manipulation plate including an upper surface having the magnetic force generator embedded therein and defining a microfluidic plate receipt cavity for removably receiving the plate therein, the plate slidable within the microfluidic plate receipt.
15 . The device of claim 13 wherein the plate includes a second collar projecting from the upper surface of the plate and defining a non-circular opening in communication with the cavity defined by the third well.
16 . The device of claim 13 wherein the dimension of the cavity defined by the first well is greater than the dimensions of the cavities defined by the second and third spaced wells.
17 . The device of claim 13 wherein the first, second and third wells are defined by corresponding well surfaces, the well surfaces being hydrophobic.