Cyclin-dependent kinase 7 (CDK7) non-covalent inhibitors
The invention relates to pharmaceutical compounds of formula (I) and pharmaceutical compositions comprising said compounds, to processes for the preparation of said compounds and to the use of said compounds as inhibitors of cyclin-dependent kinase 7 (CDK7) and to their use in the treatment of diseases, e.g. cancer.
1 . A compound of formula (Va) or (Vb), a tautomeric form, a stereochemically isomeric form, an isotopically labeled form, or a pharmaceutically acceptable salt or solvate thereof:
wherein,
R 2 is hydrogen; haloC 1-6 alkyl; C 1-6 alkoxy; C 1-6 alkyloxycarbonyl; C 2-6 alkenyl; C 2-6 alkynyl; —C(═O)—NH 2 ; —C(═O)—NH(C 1-4 alkyl); —C(═O)—N(C 1-4 alkyl) 2 ; C 3-6 cycloalkyl; phenyl; a 4 to 7 membered monocyclic heterocyclyl containing at least one heteroatom that is N, O or S; or C 1-6 alkyl optionally substituted with deuterium, hydroxyl, C 1-6 alkoxy, cyano, C 3-6 cycloalkyl, phenyl, or with a 4 to 7 membered monocyclic heterocyclyl containing at least one heteroatom that is N, O or S;
each R 5a , R 5b , R 6a , R 6b , R 7a , and R 7b , independently, is hydrogen; C 1-6 alkyl; haloC 1-6 alkyl; or R 5a and R 5b form a C 3-6 cycloalkyl together with the carbon atom to which they are bound; or R 6a and R 6b form a C 3-6 cycloalkyl together with the carbon atom to which they are bound; or R 5b and R 6a form a cyclopropyl together with the carbon atoms to which they are bound;
R 8 is a direct bond, C 1-4 alkanediyl optionally substituted with hydroxy, halo, deuterium, or C 1-4 alkoxy; —CH 2 —C(═O)—; a spiro-C 3-6 cycloalkyl; or a 4 to 7 membered spiro-monocyclic heterocyclyl containing at least one heteroatom that I s N, O or S;
A is a C 3-6 cycloalkyl; aryl; a 5 to 12 membered heteroaryl containing at least one heteroatom that is N, O or S; or a 3 to 12 membered heterocyclyl containing at least one heteroatom that is N, O or S;
R 9 is C 1-6 alkyl optionally substituted with C 3-6 cycloalkyl; cyano, halo; haloC 1-6 alkyl; C 1-6 alkoxy optionally substituted with C 3-6 cycloalkyl; haloC 1-6 alkoxy; hydroxyl; hydroxyC 1-6 alkyl; oxo; —SO 2 —C 1-4 alkyl; —SO 2 —C 3-6 cycloalkyl; —SO 2 —NH 2 , —SO 2 —NH(C 1-4 alkyl); —SO 2 —N(C 1-4 alkyl) 2 ; —NH—C(═O)—C 2-6 alkenyl; —C(═O)—C 1-6 alkyl; —C(═O)—C 1-6 alkyl-C 3-6 cycloalkyl; —C(═O)—C 3-6 cycloalkyl; —C(═O)—C 2-6 alkenyl; C 3-6 cycloalkyl; spiro-C 3-6 cycloalkyl; phenyl; a 4 to 7 membered monocyclic heterocyclyl containing at least one heteroatom that is N, O or S; or a 4 to 7 membered Spiro monocyclic heterocyclyl containing at least one heteroatom that is N, O or S;
n is 0, 1, 2, 3, 4, or 5;
R 10 is hydrogen, halo, hydroxy, mercapto, carboxyl, haloC 1-6 alkyl, mono- or di(C 1-6 alkyl)amino, mono- or di(C 1-6 alkyl)aminocarbonyl, C 1-6 alkylcarbonyl, C 1-6 alkylcarbonylamino, C 1-6 alkoxy, C 1-6 alkoxycarbonyl, C 1-6 alkylthio, cyano, nitro, haloC 1-6 alkoxy, aminocarbonyl, C 3-6 cycloalkyl, or C 1-6 alkyl optionally substituted with deuterium, amino, hydroxy, mono- or di(C 1-6 alkyl)amino, C 1-6 alkylcarbonylamino, [(mono- or diC 1-6 alkyl)amino-C 1-6 alkyl]carbonylamino, or with C 1-6 alkylsulfonylamino; and
p is 0, 1, 2, 3, 4, or 5.
2 . The compound according to claim 1 , the tautomeric form, the stereochemically isomeric form, the isotopically labeled form, or the pharmaceutically acceptable salt or solvate thereof, wherein;
R 2 is hydrogen; or C 1-6 alkyl optionally substituted with deuterium, hydroxyl, C 1-6 alkoxy, or with a 4 to 7 membered monocyclic heterocyclyl containing at least one heteroatom that is N, O or S;
each R 5a , R 5b , R 6a , R 6b , R 7a , and R 7b , independently, is hydrogen; C 1-6 alkyl; haloC 1-6 alkyl; or R 5a and R 5b form a C 3-6 cycloalkyl together with the carbon atom to which they are bound; or R 6a and R 6b form a C 3-6 cycloalkyl together with the carbon atom to which they are bound; or R 5b and R 6a form a cyclopropyl together with the carbon atoms to which they are bound;
R 8 is a direct bond, C 1-4 alkanediyl optionally substituted with hydroxy, deuterium, or C 1-4 alkoxy; —CH 2 —C(═O)—; a spiro-C 3-6 cycloalkyl; or a 4 to 7 membered spiro-monocyclic heterocyclyl containing at least one heteroatom that is N, O or S;
A is a C 3-6 cycloalkyl; aryl; a 5 to 12 membered heteroaryl containing at least one heteroatom that is N, O or S;
R 9 is C 1-6 alkyl optionally substituted with C 3-6 cycloalkyl; halo; haloC 1-6 alkyl; C 1-6 alkoxy optionally substituted with C 3-6 cycloalkyl; haloC 1-6 alkoxy; hydroxyl; hydroxyC 1-6 alkyl; oxo; —SO 2 —C 3-6 cycloalkyl; —C(═O)—C 1-6 alkyl-C 3-6 cycloalkyl; —C(═O)—C 3-6 cycloalkyl; C 3-6 cycloalkyl; spiro-C 3-6 cycloalkyl; a 4 to 7 membered monocyclic heterocyclyl containing at least one heteroatom that is N, O or S;
n is 0, 1, 2, 3, or 4;
R 10 is hydrogen, halo, hydroxy, mercapto, carboxyl, haloC 1-6 alkyl, mono- or di(C 1-6 alkyl)amino, mono- or di(C 1-6 alkyl)aminocarbonyl, C 1-6 alkylcarbonyl, C 1-6 alkylcarbonylamino, C 1-6 alkoxy, C 1-6 alkoxycarbonyl, C 1-6 alkylthio, cyano, nitro, haloC 1-6 alkoxy, aminocarbonyl, C 3-6 cycloalkyl, or C 1-6 alkyl optionally substituted with deuterium, amino, hydroxy, mono- or di(C 1-6 alkyl)amino, C 1-6 alkylcarbonylamino, [(mono- or diC 1-6 alkyl)amino-C 1-6 alkyl]carbonylamino, or with C 1-6 alkylsulfonylamino; and
p is 0, 1, 2, or 3.
3 . The compound according to claim 1 , the tautomeric form, the stereochemically isomeric form, the isotopically labeled form, or the pharmaceutically acceptable salt or solvate thereof, wherein R 5a is C 1-6 alkyl; or R 5a and R 5b form a cyclopropyl together with the carbon atom to which they are bound; or R 6a and R 6b form a cyclopropyl together with the carbon atom to which they are bound; or R 5b and R 6a form a cyclopropyl together with the carbon atoms to which they are bound.
4 . The compound according to claim 1 , the tautomeric form, the stereochemically isomeric form, the isotopically labeled form, or the pharmaceutically acceptable salt or solvate thereof, wherein:
R 8 is C 1-4 alkanediyl optionally substituted with hydroxy or deuterium;
A is a 5 to 12 membered heteroaryl containing at least one heteroatom that is N, O or S;
R 9 is C 1-6 alkyl; and
n is 1.
5 . The compound according to claim 1 , the tautomeric form, the stereochemically isomeric form, the isotopically labeled form, or the pharmaceutically acceptable salt or solvate thereof, wherein the compound is:
6 . A pharmaceutical composition comprising the compound according to claim 1 and a pharmaceutically acceptable carrier.
7 . A method for the treatment of a cancer having elevated or abnormal cyclin-dependent kinase 7 (CDK7) activity, wherein the method comprises administering to a subject in need thereof the compound of claim 1 .
8 . The method of claim 7 , wherein the cancer is leukemia, lymphoma, melanoma, multiple myeloma, bone cancer, Ewing's sarcoma, triple-negative breast cancer (TNBC), brain cancer, neuroblastoma, or lung cancer.
9 . The method of claim 7 , wherein the subject is a mammal.
10 . An in vitro method of modulating CDK7 activity comprising contacting the CDK7 protein, or portion thereof, with the compound, or the pharmaceutically acceptable salt or solvate thereof, according to claim 1 .
11 . A method for inhibiting the activity of cyclin-dependent kinase 7 (CDK7) in a subject in need thereof, wherein the method comprises administering the compound of claim 1 to the subject.
12 . The method of claim 8 , wherein the leukemia is chronic lymphocytic leukemia (CLL), acute lymphoblastic leukemia (ALL), T-cell acute lymphoblastic leukemia (T-ALL), chronic myelogenous leukemia (CML), or acute myeloid leukemia (AML).
13 . The method of claim 8 , wherein the lymphoma is Hodgkin's lymphoma or non-Hodgkin's lymphoma.
14 . The method of claim 8 , wherein the lung cancer is small cell lung cancer (SCLC) or large cell lung cancer.
15 . The method of claim 8 , wherein the bone cancer is osteosarcoma.