Use of caseinolytic protease P function as a biomarker of drug response to imipridone-like agents
Use of caseinolytic protease P (ClpP) function and/or concentration as a biomarker for predicting the response of a neoplastic disease, preferably cancer or another disease where enhancing ClpP activity may provide a therapeutic benefit, to a compound of Formula I. In other aspects it relates to methods and kits, as well as methods of treatment involving the use of the biomarker.
1 . A compound of the general Formula I:
or a pharmaceutically acceptable salt thereof, wherein:
Z1 is:
Q is:
Z2 is:
Ar1 and Ar2 are independently selected from aryl, thiophenyl and phenyl;
Ar1 may be optionally substituted with from 1 to 3 J groups;
Ar2 is substituted with from 1 to 3 JJ groups;
J is independently selected from halogen, —CN, —CF 3 , (C1-C3)haloalkyl, (C1-C6) optionally substituted alkyl, (C2-C3)alkynyl, (C1-C3)haloalkyoxy, (C1-C3) optionally substituted alkoxy, —C(O)OR15 and —C(O)R15;
JJ is independently selected from halogen, —CF 3 , —CH 3 , (C1-C3)haloalkyl, (C1-C6) optionally substituted alkyl, (C2-C6)alkynyl, —CN, (C1-C3)haloalkyoxy, —C(O)OR15, —C(O)NR17R18, and (C1-C3) optionally substituted alkoxy;
R1, R2, R3, R4, R5, R6, R7 and R8 are each independently selected from hydrogen, halogen, —CH 3 , (C1-C3)alkyl and (C1-C3) optionally substituted alkyl;
R14 is independently selected from hydrogen, halogen, —CN, —CH 3 , (C1-C3)alkyl, (C1-C6) optionally substituted alkyl, —NR17R18 and —C(O)R15; and
R15, R17 and R18 are independently selected from hydrogen, —CH 3 , (C1-C3)alkyl, and (C1-C6) optionally substituted alkyl.
2 . The compound of claim 1 or pharmaceutically acceptable salt thereof, wherein:
R1, R2, R3 and R4 are each hydrogen;
Ar1 is phenyl;
Ar2 is phenyl;
J is independently selected from halogen, —CN, —CF 3 , (C1-C3)haloalkyl, (C1-C6) optionally substituted alkyl, (C2-C3)alkynyl, (C1-C3)haloalkyoxy, (C1-C3) optionally substituted alkoxy, —C(O)OR15 and —C(O)R15;
JJ is independently selected from halogen, —CF 3 , —CH 3 , (C1-C3)haloalkyl, (C1-C6) optionally substituted alkyl, (C2-C6)alkynyl, —CN, (C1-C3)haloalkyoxy, —C(O)R15 and (C1-C3) optionally substituted alkoxy; and
R15, R17 and R18 are independently selected from hydrogen, —CH 3 and (C1-C3)alkyl.
3 . The compound of claim 2 or pharmaceutically acceptable salt thereof, wherein:
J is independently selected from halogen, —CN, —CF 3 , (C1-C3)haloalkyl, (C1-C6) optionally substituted alkyl, (C2-C3)alkynyl and (C1-C3)haloalkyoxy, (C1-C3) optionally substituted alkoxy;
JJ is independently selected from halogen, —CF 3 , —CH 3 and (C1-C3)haloalkyl; and
R5, R6, R7 and R8 are hydrogen.
4 . A compound of claim 3 or a pharmaceutically acceptable salt thereof, wherein:
J is independently selected from halogen, —CN, —CF 3 and (C2-C3)alkynyl; and
JJ is independently selected from halogen and —CF 3 .
5 . A compound of claim 4 or a pharmaceutically acceptable salt thereof, wherein:
J is halogen;
Z1 is independently selected from:
which is optionally substituted with 1-3 J groups; and
Z2 is independently selected from:
6 . A compound of claim 2 or a pharmaceutically acceptable salt thereof, wherein:
R14 is independently selected from hydrogen, halogen, —CN, —CH 3 , (C1-C3)alkyl and (C1-C6) optionally substituted alkyl; and
R5, R6, R7 and R8 are each independently selected from hydrogen, halogen, —CH 3 and (C1-C3)alkyl.
7 . A compound of claim 6 or pharmaceutically acceptable salt thereof, wherein:
J is independently selected from halogen, —CN, —CF 3 , (C1-C3)haloalkyl, (C1-C6) optionally substituted alkyl, (C2-C3)alkynyl and (C1-C3)haloalkyoxy, (C1-C3) optionally substituted alkoxy;
JJ is independently selected from halogen, —CF 3 , —CH 3 and (C1-C3)haloalkyl;
R5, R6, R7 and R8 are hydrogen; and
R14 is independently selected from hydrogen, halogen, —CH 3 , (C1-C3)alkyl.
8 . A compound of claim 7 or pharmaceutically acceptable salt thereof, wherein:
J is independently selected from halogen, —CN, —CF 3 and (C2-C3)alkynyl;
JJ is independently selected from halogen and —CF 3 and
R14 is independently selected from hydrogen, —CH 3 and (C1-C3)alkyl.
9 . A compound of claim 8 or pharmaceutically acceptable salt thereof, wherein:
J is independently selected from halogen, —CN and —CF 3 ; and
R14 is independently selected from hydrogen and —CH 3 .
10 . A compound of claim 9 or pharmaceutically acceptable salt thereof, wherein:
Z1 is independently selected from:
which is optionally substituted with 1-3 J groups; and
Z2 is independently selected from:
11 . A compound of claim 10 or pharmaceutically acceptable salt thereof, wherein:
Z1 is:
12 . A compound or a pharmaceutically acceptable salt thereof, which is:
13 . A pharmaceutical composition, comprising a compound of any of the preceding claims 1-12 or a pharmaceutically acceptable salt thereof, and a pharmaceutically acceptable carrier or excipient.