Compounds and methods for amine oxidase imaging
The invention pertains to a functionalizable and enzyme-activatable fluorescent probe and methods for monitoring the activity of amine oxidases. Amine oxidases catalyze the oxidative deamination, e.g. of the ε-amine of a lysine to an aldehyde which in turn can form covalent bonds with neighboring side chains, e.g. in the context of collagen cross-linking. Amine oxidase activity can be correlated with collagen-associated diseases including pulmonary and hepatic fibrosis, cardiomyopathy and tumor metastasis.
1 . A compound according to Formula I
wherein
a and b are independently an integer from 0 to 10;
A is a structure selected from the group consisting of
R 3 and R 4 are independently selected from the group consisting of
NHR 9′ , —OR 9′ , SR 9′ ,
linear or branched, substituted or non-substituted (C 1-10 )alkyl, (C 2-10 )alkenyl and (C 2-10 )alkynyl, or substituted or non-substituted carbocycle selected from the group consisting of (C 3-10 )carbocycle;
substituted or non-substituted triphenylphosphine connected via the phosphorous;
N-maleimidyl; and
halogens, or one of R 3 or R 4 is a proteinogenic amino acid, a non-proteinogenic amino acid or a peptide, and the other of R 3 or R 4 is a halogen;
L is absent or a linker;
X, Y and Z are independently selected from the group consisting of O, N and S;
R 9′ is selected from the group consisting of
hydrogen;
linear or branched, substituted or non-substituted, optionally sulfonated, (C 1-10 )alkyl, (C 2-10 )alkenyl, or (C 2-10 )alkynyl;
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether, (C 2-10 )alkenyl ether, (C 2-10 )alkynyl ether, or (C 4-10 )carbocyclic ether;
substituted or non-substituted carbocycle selected from the group consisting of (C 3-10 )carbocycle;
substituted or non-substituted triphenylphosphine connected via the phosphorous;
substituted or non-substituted (C 3-6 )heterocycle and (C 7 -C 10 )carbo- or hetero-bicycle having 1 to 3 heteroatoms each independently selected from N, O and S;
a proteinogenic amino acid or non-proteinogenic amino acid;
a peptide or a peptide comprising 1 to 2000 amino acids;
a collagen peptide, fibronectin peptide, fibrillin peptide, elastin peptide, or an RGD (arginylglycylaspartic acid) peptide; and
an antibody;
R 9 is selected from residues defined for R 9′ and is further selected from the group consisting of
azide, N-maleimidyl, —NH 2 , —OH and —SH 2 ;
R 9″ is selected from the group consisting of
halogen, substituted or non-substituted triphenylphosphine connected via the phosphorous, azide, —SR 10 ,
R 10 is selected from the group consisting of
linear or branched, substituted or non-substituted (C 1-10 )alkyl, (C 2-10 )alkenyl, or (C 2-10 )alkynyl; and
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether, (C 2-10 )alkenyl ether, (C 2-10 )alkynyl ether, or (C 4-10 )carbocyclic ether;
R 5 is selected from the group consisting of
hydrogen or —OH; and
halogens;
R 6 and R 8 are independently selected from the group consisting of hydrogen, —OH, and halogen; and
R 7 is each independently selected from the group consisting of
hydrogen;
linear or branched, substituted or non-substituted (C 1-10 )alkyl, (C 2-10 ) alkenyl, or (C 2-10 )alkynyl;
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether, (C 2-10 )alkenyl ether, (C 2-10 )alkynyl ether, or (C 4-10 )carbocyclic ether;
—N 2 forming an azide with the nitrogen atom of A; and
tert-Butyloxycarbonyl (Boc), 9-fluorenylmethoxycarbonyl (Fmoc), benzyloxycarbonyl(Cbz), acetyl (Ac), trifluoroacetic acid (TFA), phthalimide, benzyl (Bn), triphenylmethyl (Tr), benzylidene, or para-toluenesulfonyl (Ts);
and salts and solvates thereof.
2 . The compound according to claim 1 , wherein
a and b are independently an integer from 0 to 3;
A is a structure selected from the group consisting of
R 3 and R 4 are independently selected from the group consisting of
—NHR 9′ , —OR 9′ , SR 9′ ,
linear or branched, substituted or non-substituted (C 1-10 )alkyl;
triphenylphosphine connected via the phosphorous;
N-maleimidyl; and
halogen or one of R 3 or R 4 is a proteinogenic amino acid, a non-proteinogenic amino acid or a peptide, and the other of R 3 or R 4 is a halogen;
L is absent or a linker selected from the group consisting of
linear or branched, substituted or non-substituted (C 1-10 )alkyl;
wherein c and d are independently selected from 1, 2, 3, 4, and 5; and
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether;
X, Y and Z are independently selected from the group consisting of O, N and S;
R 9′ is selected from the group consisting of
hydrogen;
linear or branched, substituted or non-substituted, optionally sulfonated, (C 1-10 )alkyl, (C 2-10 )alkenyl, or (C 2-10 )alkynyl;
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether;
triphenylphosphine connected via the phosphorous;
a proteinogenic amino acid or a non-proteinogenic amino acid;
a peptide or a peptide comprising 1 to 2000 amino acids;
a collagen peptide, fibronectin peptide, fibrillin peptide, elastin peptide, or an RGD (arginylglycylaspartic acid) peptide; and
an antibody;
R 9 is selected from residues defined for R 9′ and is further selected from the group consisting of
azide, N-maleimidyl, —NH 2 , —OH and —SH 2 ;
R 9″ is selected from the group consisting of
azide, —SR 10 ,
R 10 is selected from the group consisting of
linear or branched, substituted or non-substituted (C 1-10 )alkyl; and
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether;
R 5 is selected from the group consisting of
hydrogen or —OH; and
halogen;
R 6 and R 8 are independently selected from the group consisting of hydrogen and halogen; and
R 7 is each independently selected from the group consisting of
hydrogen;
linear or branched, substituted or non-substituted (C 1-10 )alkyl;
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether;
—N 2 forming an azide with the nitrogen atom of A; and
Boc, Fmoc, Cbz, Ac, TFA, phthalimide, Bn, Tr, benzylidene, or Ts.
3 . The compound according to claim 1 , wherein
a is an integer from 0 to 3;
b is 0;
A is a structure selected from the group consisting of
R 3 is
R 4 is hydrogen, linear or branched, substituted or non-substituted (C 1-10 )alkyl;
L is absent or a linker selected from the group consisting of
linear or branched, substituted or non-substituted (C 1-10 )alkyl;
wherein c and d are independently selected from 1, 2, 3, 4, and 5; and
linear or branched, substituted or non-substituted (C 1-10 )alkyl ether;
X is selected from the group consisting of O, N and S;
Z is O;
R 9 is selected from the group consisting of
hydrogen or N-maleimidyl;
linear or branched, substituted or non-substituted (C 1-10 )alkyl, (C 2-10 )alkenyl, or (C 2-10 )alkynyl;
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether;
triphenylphosphine connected via the phosphorous:
a proteinogenic amino acid, a non-proteinogenic amino acid, lysine, proline, glycine, 4-hydroxyproline, 4-aminoproline, or 4-aminooxyproline;
a peptide or a peptide comprising 1 to 2000 amino acids;
a collagen peptide, fibronectin peptide, fibrillin peptide, elastin peptide, or an RGD (arginylglycylaspartic acid) peptide;
an antibody an anti-collagen, anti-elastin, anti-fibronectin, or anti-fibrillin antibody; and
azide, —NH 2 , —OH, or —SH 2 ;
R 9″ is selected from the group consisting of
azide, —SR 10 ,
R 10 is selected from the group consisting of linear or branched, substituted or non-substituted (C 1-10 )alkyl, (C 2-10 )alkenyl, and (C 2-10 ) )alkynyl;
R 5 is selected from the group consisting of
hydrogen or —OH; and
halogen;
R 6 and R 8 are independently selected from the group consisting of hydrogen and halogen; and
R 7 is each independently selected from the group consisting of
hydrogen;
linear or branched, substituted or non-substituted (C 1-10 )alkyl;
—N 2 forming an azide with the nitrogen atom of A; and
Boc, Fmoc, or Cbz.
4 . The compound according to claim 1 , wherein the compound is a compound according to Formula II
wherein
a is 1 or 2;
b is 0;
A is a structure selected from the group consisting of
R 3 is
R 4 is hydrogen or linear or branched, substituted or non-substituted (C 1-10 )alkyl;
L is absent,
wherein c and d are independently selected from 1, 2, 3, 4, and 5;
X is selected from the group consisting of O and N;
Z is O;
R 9 is selected from the group consisting of
hydrogen or N-maleimidyl;
linear or branched, substituted or non-substituted (C 1-10 )alkyl;
triphenylphosphine connected via the phosphorous;
a proteinogenic amino acid, a non-proteinogenic amino acid, lysine, proline, glycine, 4-hydroxyproline, 4-aminoproline, or 4-aminooxyproline;
a collagen peptide, fibronectin peptide, fibrillin peptide, elastin peptide, or an RGD (arginylglycylaspartic acid) peptide; and
azide, —NH 2 , —OH and —SH 2 ;
R 9″ is selected from the group consisting of
azide,
and
R 7 is each independently selected from the group consisting of
hydrogen; and
linear or branched, substituted or non-substituted (C 1-10 )alkyl.
5 . The compound according to claim 1 , wherein the linear or branched, substituted or non-substituted (C 1-10 )alkyl for at least one of R 3 , R 4 , R 7 , R 9′ and/or R 10 is selected from methyl, ethyl, and propyl.
6 . The compound according to claim 1 , wherein the (C 3-10 )carbocycle for at least one of R 3 , R 4 and/or R 9′ is an aromatic (C 6 )carbocycle.
7 . The compound according to claim 1 , wherein R 3 and/or R 4 are an aromatic (C 6 )carbocycle if a and/or b are 0.
8 . The compound according to claim 1 , wherein for at least one of R 3 , R 4 , R 5 , R 6 , R 8 and/or R 9″ the halogen is selected from F, Cl, Br, and I.
9 . The compound according to claim 1 , wherein if one of R 3 or R 4 is a proteinogenic amino acid, a non-proteinogenic amino acid, or a peptide, the other of R 3 or R 4 is a halogen.
10 . The compound according to claim 1 , wherein the linker is selected from the group consisting of:
linear or branched, substituted or non-substituted (C 1-10 )alkyl, (C 2-10 )alkenyl, or (C 2-10 )alkynyl;
a (C 1-10 ) alkyl comprising one or more amide functionalities in the alkyl chain;
wherein c and d are independently selected from 1, 2, 3, 4, and 5; and
linear or branched, substituted or non-substituted (C 1-20 )alkyl ether, (C 2-10 )alkenyl ether, (C 2-10 )alkynyl ether, and (C 4-10 )carbocyclic ether.
11 . The compound according to claim 1 , wherein Z is selected from the group consisting of O and N.
12 . The compound according to claim 1 , wherein for at least one of R 7 , R 9 and/or R 10 , the (C 1-20 )alkyl ether is a polyethylene glycol (PEG) chain or a PEG chain with 1 to 10 ethylene oxide entities.
13 . The compound according to claim 1 , wherein for R 9′ , the (C 3-10 )carbocycle is a carbocycle substituted by a substituent selected from the group consisting of Cl, F, Br, substituted or non-substituted methyl, —(CF 3 ), ethyl, propyl and cyclopropyl.
14 . The compound according to claim 1 , wherein for R 9′ , the (C 7 -C 10 )heterobicycle is a substituted or non-substituted (C 7 )heterobicycle having 2 heteroatoms selected from N and S.
15 . The compound according to claim 1 , wherein for R 9′ , the proteinogenic amino acid or non-proteinogenic amino acid is an aminooxy or hydrazide derivative of the proteinogenic or non-proteinogenic amino acid.
16 . The compound according to claim 1 , wherein for R 9′ , the proteinogenic amino acid or non-proteinogenic amino acid is selected from the group consisting of lysine, proline, glycine, 4-hydroxyproline, 4-aminoproline, and 4-aminooxyproline.
17 . The compound according to claim 1 , wherein for R 9′ , the peptide comprises 1 to 2000 amino acids.
18 . The compound according to claim 1 , wherein for R 9′ , the peptide comprises 1 to 10, [proline]-[4-hydroxyproline]-[glycine] units.
19 . The compound according to claim 1 , wherein for R 9′ , the antibody is an anti-collagen, anti-elastin, anti-fibronectin or anti-fibrillin antibody.