Modified carbocyanine dyes and their conjugates
View Patent ↗Chemically reactive carbocyanine dyes incorporating an indolium ring moiety that is substituted at the 3-position by a reactive group or by a conjugated substance, and their uses, are described. Conjugation through this position results in spectral properties that are uniformly superior to those of conjugates of spectrally similar dyes wherein attachment is at a different position. The invention includes derivative compounds having one or more benzo nitrogens.
1. A compound having the formula:
and its salts, wherein
R 2 is alkyl or sulfoalkyl;
R 12 is alkyl or sulfoalkyl;
R 3 is carboxyalkyl;
R 4 is alkyl;
R 13 is alkyl;
R 14 is alkyl;
R 6 is hydrogen or sulfo;
R 7 is hydrogen or sulfo;
R 8 is hydrogen or sulfo;
R 9 is hydrogen or sulfo;
R 16 is hydrogen or sulfo;
R 17 is hydrogen or sulfo;
R 18 is hydrogen or sulfo;
R 19 is hydrogen or sulfo;
wherein sulfo is sulfonic acid or sulfonate; and,
n is 1, 2 or 3.
2. A compound having the formula:
and its salts, wherein,
R 2 is alkyl or sulfoalkyl;
R 12 is alkyl or sulfoalkyl;
wherein sulfo is sulfonic acid or sulfonate;
R 3 is carboxyalkyl;
R 4 is methyl;
R 13 is methyl;
R 14 is methyl; and,
n is 1, 2 or 3.
3. A compound having the formula:
and its salts, wherein
R 2 is alkyl or sulfoalkyl;
R 12 is alkyl or sulfoalkyl;
R 4 is alkyl;
R 13 is alkyl;
R 14 is alkyl;
R 6 is hydrogen or sulfo;
R 7 is hydrogen or sulfo;
R 8 is hydrogen or sulfo;
R 9 is hydrogen or sulfo;
R 16 is hydrogen or sulfo;
R 17 is hydrogen or sulfo;
R 18 is hydrogen or sulfo;
R 19 is hydrogen or sulfo;
wherein sulfo is sulfonic acid or sulfonate; and,
n is 1, 2 or 3.
4. A compound having the formula:
and its salts, wherein
R 2 is alkyl or sulfoalkyl;
R 12 is alkyl or sulfoalkyl;
R 4 is alkyl;
R 13 is alkyl;
R 14 is alkyl;
R 6 is hydrogen or sulfo;
R 7 is hydrogen or sulfo;
R 8 is hydrogen or sulfo;
R 9 is hydrogen or sulfo;
R 16 is hydrogen or sulfo;
R 17 is hydrogen or sulfo;
R 18 is hydrogen or sulfo;
R 19 is hydrogen or sulfo;
wherein sulfo is sulfonic acid or sulfonate; and,
n is 1, 2 or 3.
5. A compound having the formula:
and its salts, wherein
R 2 is alkyl or sulfoalkyl;
R 12 is alkyl or sulfoalkyl;
wherein sulfo is sulfonic acid or sulfonate; and,
n is 1, 2 or 3.