IP Library Granted Patent US 6,908,963
Granted Patent B2
US 6,908,963 · App. 09/973,318 · Granted Jun 21, 2005

Thioester polymer derivatives and method of modifying the N-terminus of a polypeptide therewith

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Quick Facts
Patent No.
US 6,908,963
App. No.
09/973,318
Granted
Jun 21, 2005
Kind
B2
Abstract

The invention provides reagents and methods for conjugating polymers specifically to the α-amine of polypeptides in high yield. The invention provides monofunctional, bifunctional, and multifunctional PEGs and related polymers having a thioester moiety capable of specifically conjugating to the α-amine of a polypeptide having a cysteine or histidine at the N-terminus. The invention provides active thioester derivatives of PEG that have suitable reactivity with an N-terminal cysteine or histidine residue of a polypeptide to produce an amide bond between the PEG and polypeptide. Use of these active esters to prepare PEG-proteins and PEG-peptides is described.

Claims (48)

1. A thioester polymer derivative, comprising a water soluble and non-peptidic polymer backbone having at least one terminus bonded to the structure:

wherein,

L is the point of bonding to the polymer backbone,

Z is selected from the group consisting of —O—, —S—, —NHCO—, —CONH—, —O 2 C—,

—NHCO 2 —, and —O 2 CNH—,

m is from 0 to about 12,

each X is independently selected from H and alkyl,

a is 0 or 1, and

Q is a leaving group.

2. The polymer derivative of claim 1 , wherein the polymer backbone is selected from the group consisting of poly(alkylene glycol), poly(oxyethylated polyol), poly(olefinic alcohol), poly(vinylpyrrolidone), poly(α-hydroxy acid), poly(vinyl alcohol), polyphosphazene, polyoxazoline, poly(N-acryloylmorpholine), polyacrylate, polyacrylamides, polysaccharides, and copolymers, terpolymers, and mixtures thereof.

3. The polymer derivative of claim 1 , wherein said water soluble and non-peptidic polymer backbone is selected from the group consisting of poly(ethylene glycol), poly(propylene glycol), and copolymers of ethylene glycol and propylene glycol.

4. The polymer derivative of claim 1 , wherein the polymer backbone is poly(ethylene glycol).

5. The polymer derivative of claim 4 , wherein the poly(ethylene glycol) has an average molecular weight from about 800 Da to about 100,000 Da.

6. The polymer derivative of claim 1 , wherein the polymer backbone has about 2 to about 300 termini.

7. The polymer derivative of claim 1 , wherein the polymer backbone has the structure

R—CH 2 CH 2 O—(CH 2 CH 2 O) n —CH 2 CH 2 —

wherein R is a capping group and n is about 2 to about 4000.

8. The polymer derivative of claim 7 , wherein R is selected from the group consisting of alkoxy, alkyl, benzyl, aryl, aryloxy, hydroxyl, protected hydroxyl, active ester, active carbonate, acetal, aldehyde, aldehyde hydrates, alkenyl, acrylate, methacrylate, acrylamide, active sulfone, amine, protected amine, hydrazide, protected hydrazide, thiol, protected thiol, carboxylic acid, protected carboxylic acid, isocyanate, isothiocyanate, maleimide, vinylsulfone, dithiopyridine, vinylpyridine, iodoacetamide, epoxide, glyoxals, diones, mesylates, tosylates, tresylate or —(Z) a —(CXH) m —CO—S—Q, wherein Z, X, m, a and Q are as defined above.

9. The polymer derivative of claim 1 , wherein the polymer backbone has the structure

wherein R is a capping group, each X′ is independently H or alkyl, and n is about 2 to about 4000.

10. The polymer derivative of claim 9 , wherein R is selected from the group consisting of alkoxy, alkyl, benzyl, aryl, aryloxy, hydroxyl, protected hydroxyl, active ester, active carbonate, acetal, aldehyde, aldehyde hydrates, alkenyl, acrylate, methacrylate, acrylamide, active sulfone, amine, protected amine, hydrazide, protected hydrazide, thiol, protected thiol, carboxylic acid, protected carboxylic acid, isocyanate, isothiocyanate, maleimide, vinylsulfone, dithiopyridine, vinylpyridine, iodoacetamide, epoxide, glyoxals, diones, mesylates, tosylates, tresylate or —(Z) a —(CXH) m —CO—S—Q, wherein Z, X, m, a and Q are as defined above.

11. The polymer derivative of claim 1 , wherein Q is selected from the group consisting of hydrogen, alkyl, substituted alkyl, aryl, substituted aryl, phenol, nitrophenol, benzoic acid, pyridine, pyridinecarboxylic acid and nitropyridine.

12. The polymer derivative of claim 1 , wherein Q is pyridine.

13. The polymer derivative of claim 1 , wherein a is 1 and Z is O.

14. The polymer derivative of claim 1 , wherein m is 1 to about 4.

15. The polymer derivative of claim 1 , having the structure:

wherein POLY is a water soluble and non-peptidic polymer backbone, R is a capping group, and Z, X, m, a and Q are as defined above.

16. The polymer derivative of claim 15 , wherein R is selected from the group consisting of alkoxy, alkyl, benzyl, aryl, aryloxy, hydroxyl, protected hydroxyl, active ester, active carbonate, acetal, aldehyde, aldehyde hydrates, alkenyl, acrylate, methacrylate, acrylamide, active sulfone, amine, protected amine, hydrazide, protected hydrazide, thiol, protected thiol, carboxylic acid, protected carboxylic acid, isocyanate, isothiocyanate, maleimide, vinylsulfone, dithiopyridine, vinylpyridine, iodoacetamide, epoxide, glyoxals, diones, mesylates, tosylates, tresylate or —(Z) a —(CXH) m —CO—S—Q, wherein Z, X, m, a and Q are as defined above.

17. The polymer derivative of claim 15 , wherein POLY is selected from the group consisting of poly(alkylene glycol), poly(oxyethylated polyol), poly(olefinic alcohol), poly(vinylpyrrolidone), poly(α-hydroxy acid), poly(vinyl alcohol), polyphosphazene, polyoxazoline, poly(N-acryloylmorpholine), polyacrylate, polyacrylamides, polysaccharides, and copolymers, terpolymers, and mixtures thereof.

18. The polymer derivative of claim 15 , wherein POLY is selected from the group consisting of poly(ethylene glycol), poly(propylene glycol), and copolymers of ethylene glycol and propylene glycol.

19. The polymer derivative of claim 15 , wherein POLY is poly(ethylene glycol).

20. The polymer derivative of claim 15 , wherein Q is selected from the group consisting of hydrogen, alkyl, substituted alkyl, aryl, substituted aryl, phenol, nitrophenol, benzoic acid, pyridine, pyridinecarboxylic acid and nitropyridine.

21. The polymer derivative of claim 15 , wherein Q is pyridine.

22. The polymer derivative of claim 15 , wherein a is 1 and Z is 0.

23. The polymer derivative of claim 15 , wherein m is 1 to about 4.

24. The polymer derivative of claim 15 , wherein a and m are 0.

25. The polymer derivative of claim 1 , having the structure:

wherein Q is as defined above and n is from about 2 to about 4000.

26. The polymer derivative of claim 1 , having the structure:

wherein Q is as defined above and n is from about 2 to about 4000.

27. The polymer derivative of claim 1 , having the structure:

wherein Q is as defined above and n is from about 2 to about 4000.

28. The polymer derivative of claim 1 , having the structure:

wherein each POLY is a water soluble and non-peptidic polymer backbone, R′ is a non-dendritic central core molecule, y is from about 3 to about 100, and Z, X, m, a and Q are as defined above.

29. The polymer derivative of claim 28 , wherein POLY is selected from the group consisting of poly(alkylene glycol), poly(oxyethylated polyol), poly(olefinic alcohol), poly(vinylpyrrolidone), poly(α-hydroxy acid), poly(vinyl alcohol), polyphosphazene, polyoxazoline, poly(N-acryloylmorpholine), polyacrylate, polyacrylamides, polysaccharides, and copolymers, terpolymers, and mixtures thereof.

30. The polymer derivative of claim 28 , wherein POLY is poly(ethylene glycol).

31. The polymer derivative of claim 28 , wherein R′ is derived from a molecule selected from the group consisting of polyols, polyamines, and molecules having a combination of alcohol and amine groups.

32. The polymer derivative of claim 28 , wherein R′ is derived from a molecule selected from the group consisting of glycerol, glycerol oligomers, pentaerythritol, sorbitol, and lysine.

Assignments (5)
RELEASE OF SECURITY INTEREST Recorded Apr 17, 2020
From: TC LENDING, LLC, AS COLLATERAL AGENT
To: NEKTAR THERAPEUTICS
Reel/Frame 053180/0009 →
RELEASE OF SECURITY INTEREST RECORDED AT REEL 28571, FRAME 0141 Recorded Oct 14, 2015
From: WELLS FARGO BANK, NATIONAL ASSOCIATION, AS COLLATERAL AGENT
To: NEKTAR THERAPEUTICS
Reel/Frame 036866/0700 →
GRANT OF SECURITY INTEREST IN UNITED STATES PATENTS Recorded Oct 6, 2015
From: NEKTAR THERAPEUTICS
To: TC LENDING, LLC, AS COLLATERAL AGENT
Reel/Frame 036796/0562 →
GRANT OF SECURITY INTEREST Recorded Jul 17, 2012
From: NEKTAR THERAPEUTICS
To: WELLS FARGO BANK, NATIONAL ASSOCIATION, AS COLLATERAL AGENT
Reel/Frame 028571/0141 →
MERGER Recorded Aug 31, 2009
From: NEKTAR THERAPEUTICS AL, CORPORATION
To: NEKTAR THERAPEUTICS
Reel/Frame 023196/0394 →