IP Library Granted Patent US 7,015,004
Granted Patent B2
US 7,015,004 · App. 09/993,295 · Granted Mar 21, 2006

Inter-alpha trypsin inhibitor biopolymer marker indicative of insulin resistance

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Quick Facts
Patent No.
US 7,015,004
App. No.
09/993,295
Granted
Mar 21, 2006
Kind
B2
Abstract

The instant invention involves the use of a combination of preparatory steps in conjunction with mass spectroscopy and time-of-flight detection procedures to maximize the diversity of biopolymers which are verifiable within a particular sample. The cohort of biopolymers verified within such a sample is then viewed with reference to their ability to evidence at least one particular disease state; thereby enabling a diagnostician to gain the ability to characterize either the presence or absence of at least one disease state relative to recognition of the presence and/or the absence of the biopolymer, predict disease risk assessment, and develop therapeutic avenues against the disease.

Claims (13)

1. An isolated biopolymer marker consisting of SEQ ID NO:2.

2. A method for determining in a patient sample, the presence of an isolated biopolymer marker consisting of SEQ ID NO: 2 which is linked to insulin resistance comprising:

(a) obtaining a sample from a patient;

(b) conducting mass spectrometric analysis on said sample in a manner effective to maximize analysis of peptide fragments contained therein and comparing mass spectrum profiles of said isolated biopolymer marker consisting of SEQ ID NO:2 to mass spectrum profiles of peptides obtained and analyzed from said sample; and

(c) confirming the presence of said isolated biopolymer marker consisting of SEQ ID NO:2 in said sample displaying a peak profile at about 1812 daltons in said mass spectrum profile;

wherein the presence of said isolated biopolymer marker consisting of SEQ ID No:2 is indicative of a link to insulin resistance.

3. The method of claim 2 , wherein the sample is an unfractionated body fluid or a tissue sample.

4. The method of claim 2 , wherein said sample is selected from the group consisting of blood, blood products, urine, saliva, cerebrospinal fluid, and lymph.

5. The method of claim 2 , wherein said mass spectrometric analysis is selected from the group consisting of Surface Enhanced Laser Desorption Ionization (SELDI) mass spectrometry (MS), Maldi Qq TOF, MS/MS, TOF—TOF, ESI-Q-TOF and ION-TRAP.

6. The method of claim 2 , wherein said patient is a human.

7. A kit for determining the presence of an isolated biopolymer marker consisting of SEQ ID NO:2 comprising: (a) a peptide consisting of SEQ ID NO:2, and (b) an antibody that binds to said peptide in a sample from a patient.

8. The kit of claim 7 , wherein said antibody is immobilized on a solid support.

9. The kit of claim 7 , wherein said antibody is labeled.

Assignments (7)
GRANT OF SECURITY INTEREST Recorded Jul 25, 2008
From: NANOGEN, INC.
To: PORTSIDE GROWTH & OPPORTUNITY FUND, AS COLLATERAL AGENT
Reel/Frame 021291/0605 →
RELEASE OF SECURITY INTEREST Recorded Apr 17, 2008
From: NANOGEN POINT OF CARE, INC.
To: NANOGEN, INC.
Reel/Frame 020826/0087 →
ASSIGNMENT OF INTELLECTUAL PROPERTY SECURITY AGREEMENT Recorded Apr 15, 2008
From: THE CANADA TRUST COMPANY
To: NANOGEN, INC.
Reel/Frame 020807/0247 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 31, 2006
From: NANOGEN POINT OF CARE INC.
To: NANOGEN INC.
Reel/Frame 017706/0515 →
CHANGE OF NAME Recorded May 19, 2006
From: SYN X PHARMA INC.
To: NANOGEN POINT OF CARE INC.
Reel/Frame 017656/0059 →
SECURITY INTEREST Recorded Feb 12, 2004
From: SYNX PHARMA INC.
To: NANOGEN, INC.
Reel/Frame 014337/0010 →
SECURITY AGREEMENT Recorded Jul 18, 2003
From: SYNX PHARMA INC.
To: CANADA TRUST COMPANY, THE
Reel/Frame 014242/0790 →