IP Library Patent Application 09993399
Patent Application
App. No. 09/993,399

Cene-E biopolymer marker indicative of age matched control

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Quick Facts
Patent No.
US None
App. No.
09/993,399
Abstract

The instant invention involves the use of a combination of preparatory steps in conjunction with mass spectroscopy and time-of-flight detection procedures to maximize the diversity of biopolymers which are verifiable within a particular sample. The cohort of biopolymers verified within such a sample is then viewed with reference to their ability to evidence at least one particular disease state; thereby enabling a diagnostician to gain the ability to characterize either the presence or absence of said at least one disease state relative to recognition of the presence and/or the absence of said biopolymer, predict disease risk assessment, and develop therapeutic avenues against said disease.

Claims (12)

1 . An isolated biopolymer marker consisting of SEQ ID NO:1 which evidences a link to Alzheimer's disease.

2 - 38 . (canceled)

39 . A method for determining the presence of a biopolymer marker consisting of SEQ ID NO:1 comprising:

(a) conducting mass spectrometric analysis on a sample obtained from a patient in a manner effective to maximize analysis of peptide fragments contained therein and comparing mass spectral profiles of said biopolymer marker consisting of SEQ ID NO:1 to mass spectral profiles of peptides obtained and analyzed from said sample; and

(b) confirming the presence of said biopolymer marker consisting of SEQ ID NO:1 in said sample by identifying a mass spectral profile having an ion peak at about 1594 daltons; wherein the presence of said biopolymer marker consisting of SEQ ID NO:1 is indicative of a link to Alzheimer's disease.

40 . The method of claim 39 , wherein said sample is an unfractionated body fluid or a tissue sample.

41 . The method of claim 39 , wherein said sample is selected from the group consisting of blood, blood products, urine, saliva, cerebrospinal fluid, and lymph.

42 . The method of claim 39 , wherein said mass spectrometric analysis is selected from the group consisting of Surface Enhanced Laser Desorption Ionization (SELDI) mass spectrometry (MS), Maldi Qq TOF, MS/MS, TOF-TOF, ESI-Q-TOF and ION-TRAP.

43 . The method of claim 39 , wherein said patient is a human.

44 . A kit for determining the presence of a biopolymer marker consisting of SEQ ID NO:1 comprising: (a) a peptide consisting of SEQ ID NO:1, and (b) an antibody that binds to said peptide in a sample obtained from a patient.

45 . The kit of claim 44 , wherein said antibody is immobilized on a solid support.

46 . The kit of claim 44 , wherein said antibody is labeled.

Assignments (7)
GRANT OF SECURITY INTEREST Recorded Jul 25, 2008
From: NANOGEN, INC.
To: PORTSIDE GROWTH & OPPORTUNITY FUND, AS COLLATERAL AGENT
Reel/Frame 021291/0605 →
RELEASE OF SECURITY INTEREST Recorded Apr 17, 2008
From: NANOGEN POINT OF CARE, INC.
To: NANOGEN, INC.
Reel/Frame 020826/0087 →
ASSIGNMENT OF INTELLECTUAL PROPERTY SECURITY AGREEMENT Recorded Apr 15, 2008
From: THE CANADA TRUST COMPANY
To: NANOGEN, INC.
Reel/Frame 020807/0247 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 29, 2006
From: NANOGEN POINT OF CARE INC.
To: NANOGEN INC.
Reel/Frame 018187/0948 →
CHANGE OF NAME Recorded Jul 3, 2006
From: SYN X PHARMA INC.
To: NANOGEN POINT OF CARE INC.
Reel/Frame 017883/0192 →
SECURITY INTEREST Recorded Feb 12, 2004
From: SYNX PHARMA INC.
To: NANOGEN, INC.
Reel/Frame 014337/0010 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 19, 2002
From: JACKOWSKI, GEORGE; MARSHALL, JOHN
To: SYN X PHARMA
Reel/Frame 012727/0320 →