Method for identifying a HCV RNA-dependent RNA polymerase inhibitor
View Patent ↗The present invention relates to the molecular biology and virology of the hepatitis C virus (HCV). An object of the present invention is a method to reproduce in vitro the RNA-dependent RNA polymerase activity of HCV that makes use of sequences contained in the HCV NS5B protein.
1. A method for identifying a HCV RNA-dependent RNA polymerase inhibitor comprising:
(a) incubating in vitro a composition comprising a purified HCV NS5B recombinant protein, ribonucleotide substrates, an RNA template, and a test compound, under conditions suitable to produce NS5B RNA-dependent RNA polymerase activity in the absence of said test compound, wherein said recombinant protein was expressed in either a eukaryotic or prokaryotic heterologous system and purified to apparent homogeneity, wherein said NS5B is the only HCV protein present during said incubating; and
(b) measuring the ability of said test compound to inhibit said NS5B RNA-dependent RNA polymerase activity and thereby identifying an HCV RNA-dependent RNA polymerase inhibitor.
2. The method of claim 1 , wherein said method measures primer independent RNA-dependent RNA polymerase activity.