IP Library Granted Patent US 6,884,804
Granted Patent B2
US 6,884,804 · App. 10/146,984 · Granted Apr 26, 2005

Inhibitors of Src and other protein kinases

View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 6,884,804
App. No.
10/146,984
Granted
Apr 26, 2005
Kind
B2
Abstract

The present invention provides compounds of formula I: wherein A is N or CR, and G, R 1 , R 2 and R 3 are as described in the specification. These compounds are inhibitors of protein kinase, particularly inhibitors of Src mammalian protein kinase involved in cell proliferation, cell death and response to extracellular stimuli. The invention also relates to methods for producing these inhibitors. The invention also provides pharmaceutical compositions comprising the inhibitors of the invention and methods of utilizing those compositions in the treatment and prevention of various disorders.

Claims (1282)

1. A compound of formula I:

or a pharmaceutically acceptable salt thereof, wherein:

G is —XR or —XAr;

each X is independently selected from a C 1-4 alkylidene chain, wherein one or two non-adjacent methylene units of X are independently replaced by —S—, —SO—, —SO 2 —, —O—, or —NH—;

A is N;

each R is independently selected from hydrogen or an optionally substituted C 1-8 aliphatic group;

Ar is an optionally substituted ring selected from phenyl, pyridyl, imidazolyl, thienyl, thiazolyl, [1,3]dioxanyl, piperidinyl, morpholinyl, pyrrolyl, pyrrolidinyl, furanyl, tetrahydrofuranyl, pyranyl, imidazolyl, benzimidazolyl, pyrrolyl, piperazinyl, thiomorpholinyl, naphthyl, oxazolyl, triazinyl, tetrazolyl, dithiolanyl, dioxalanyl, benzofuranyl, benzothienyl, or indolyl;

R 1 is T (n) -R or T (n) attached to an optionally susbtituted ring selected from phenyl, cyclohexyl, pyridyl, naphthyl, quinolinyl, isoquinolinyl, or indanyl;

n is zero or one;

T is selected from —C(O)—, —CO 2 —, —C(O)C(O)—, —C(O)CH 2 C(O)—, —CONR—, —S(O) 2 —, or —S(O) 2 NR—;

R 2 is selected from hydrogen, Ar, or a C 1-8 aliphatic group optionally substituted with 1-3 groups independently selected from oxo, OR, SR, SO 2 R, C(O)R, CO 2 R, CN, N(R) 2 , ═N—OR, ═NN(R) 2 , ═NNHC(O)R, ═NNHCO 2 R, ═NNHSO 2 R, Ar, NRC(O)N(R) 2 , NRC(O)R, NRCO 2 R, C(O)N(R) 2 , SO 2 N(R) 2 , or NRSO 2 N(R) 2 ; and

R 3 is selected from R or an optionally substituted ring selected from cyclohexyl, cyclopentyl, phenyl, pyridyl, pyrimidinyl, or pyridazinyl.

2. The compound according to claim 1 , wherein:

R is a C 1-4 aliphatic group optionally substituted with halo, CN, oxo, N(R o ) 2 , OH, OR o , CO 2 R o , C(O)R o , C(O)N(R o ) 2 , NR o CO 2 R o , SR o , NR o SO 2 R o , SO 2 R o , NR o C(O)R o , OC(O)R o , or NR o C(O)N(R o ) 2 , wherein each R o group is independently selected from hydrogen or C 1-4 aliphatic;

Ar is an optionally substituted ring selected from phenyl, pyridyl, imidazolyl, thienyl, thiazolyl, [1,3]dioxanyl, piperidinyl, morpholinyl, pyrrolyl, pyrrolidinyl, furanyl, tetrahydrofuranyl, pyranyl, imidazolyl, benzimidazolyl, pyrrolyl, piperazinyl, thiomorpholinyl, naphthyl, oxazolyl, triazinyl, tetrazolyl, dithiolanyl, dioxalanyl, benzofuranyl, benzothienyl, or indolyl; and

R 3 is selected from an optionally substituted cyclohexyl, cyclopentyl, phenyl, pyridyl, pyrimidinyl, or pyridazinyl ring.

3. The compound according to claim 1 , wherein:

R 2 is selected from R, CH 2 N(R) 2 , or CH 2 Ar, wherein:

each R is independently selected from hydrogen or optionally substituted C 1-4 aliphatic, and

Ar is an optionally substituted ring selected from phenyl, pyridyl, [1,3]dioxanyl, piperidinyl, morpholinyl pyranyl, or piperazinyl.

4. The compound according to claim 1 , wherein:

when n is zero, then R 1 is T (n) attached to an attached to an optionally subsbtituted rin selected from phenyl, cyclohehyl, pyridyl, naphthyl, quinolinyl, isoquinolinyl, or indanyl.

5. The compound according to claim 4 , wherein:

R 1 is phenyl, cyclohexyl, pyridyl, naphthyl, quinolinyl, isoquinolinyl, or indanyl, wherein:

R 1 is optionally substituted with 1-3 groups independently selected from R o , halogen, NO 2 , CN, OR o , SR o , N(R o ) 2 , CO 2 R o , C(O)R o , CON(R o ) 2 , phenyl, SO 2 R o , or NR o C(O)R o , wherein each R o is independently selected from hydrogen or an optionally substituted C 1-4 aliphatic.

6. The compound according to claim 5 , wherein R 1 is optionally sutstituted with 1-3 groups independently selected from methyl, ethyl, oxo, CF 3 , Ome, C(O)Me, C(O)phenyl, CH═CH, CO 2 H, C(O)NH 2 , SMe, CO 2 Me, fluoro, SO 2 Me, NO 2 , OC, chloro, N(Me) 2 , NHC(O)Me, NH 2 , cyanophenyl, CO 2 Et, CH 2 OH, CH 2 OMe, 3-CH 2 CO 2 H-phenyl, or 3-CH 2 CH 2 CO 2 H-phenyl.

7. The compound according to claim 4 , wherein:

R 2 is selected from R, CH 2 N(R) 2 , or CH 2 Ar, wherein:

each R is independently selected from hydrogen or optionally substituted C 1-4 aliphatic, and

Ar is an optionally substituted ring selected from phenyl, cyclohexyl, or pyridyl.

8. A compound selected from:

No.

S-R

R 2

R 3

R 4

R 5

R 6

R 7

IIA-1

SCH 3

Me

Ph

H

H

H

H

IIA-2

SCH 3

Me

Ph

H

H

OMe

H

IIA-3

SCH 3

Me

Ph

H

OMe

OMe

H

IIA-4

SCH 3

Me

Ph

Me

H

H

H

IIA-5

SCH 3

Me

Ph

Me

H

CONH 2

H

IIA-6

SCH 3

Me

Ph

Me

H

CN

H

IIA-7

SCH 3

Me

Ph

H

CN

H

H

IIA-8

SCH 3

Me

Ph

Me

F

H

H

IIA-9

SCH 3

Me

Ph

Me

H

F

H

IIA-10

SCH 3

Me

Ph

CF 3

H

H

H

IIA-11

SCH 3

Et

Ph

H

CN

H

H

IIA-12

SCH 3

Et

Ph

H

CO 2 H

H

H

IIA-13

SCH 3

Me

Ph

H

F

H

H

IIA-14

SCH 3

Me

Ph

H

H

F

H

IIA-15

SCH 3

Me

Ph

H

H

COMe

H

IIA-16

SCH 3

Me

Ph

H

H

COPh

H

IIA-17

SCH 3

Me

Ph

H

H

CONH 2

H

IIA-18

SCH 3

Me

Ph

H

OMe

H

OMe

IIA-19

SCH 3

Me

Ph

H

F

H

H

IIA-20

SCH 3

Me

Ph

H

H

CN

H

IIA-21

SCH 3

Me

Ph

H

H

COMe

H

IIA-22

SCH 3

Me

Ph

H

CH═CH

H

H

IIA-23

SCH 3

Me

Ph

H

SMe

H

H

IIA-24

SCH 3

Me

Ph

H

Me

CN

H

IIA-25

SCH 3

Me

Ph

H

COMe

H

H

IIA-26

SCH 3

Et

Ph

H

H

H

H

IIA-27

SCH 3

Me

Ph

OMe

H

H

H

IIA-28

SCH 3

Me

Ph

H

H

F

H

IIA-29

SCH 3

Me

Ph

H

CO 2 H

H

H

IIA-30

SCH 3

Me

Ph

H

H

Ph

H

IIA-31

SCH 3

Me

Ph

H

Me

H

Me

IIA-32

SCH 3

Me

Ph

H

H

SMe

H

IIA-33

SCH 3

Me

Ph

H

H

OMe

H

IIA-34

SCH 3

Me

Ph

H

OMe

H

H

IIA-35

SCH 3

Me

Ph

OMe

H

H

CN

IIA-36

SCH 3

Me

Ph

H

CO 2 Me

H

H

IIA-37

SCH 3

Me

Ph

F

H

H

CN

IIA-38

SCH 3

Me

Ph

H

H

H

H

IIA-39

SCH 3

Me

Ph

H

H

CO 2 H

H

IIA-40

SCH 3

Me

Ph

Me

H

CN

H

IIA-41

SCH 3

Me

Ph

F

H

F

H

IIA-42

SCH 3

Me

Ph

Me

H

CONH 2

H

IIA-43

SCH 3

Me

Ph

Me

Cl

H

H

IIA-44

SCH 3

Me

Ph

F

H

H

H

IIA-45

SCH 3

Me

Ph

Me

H

OMe

H

IIA-46

SCH 3

Me

Ph

OMe

H

H

H

IIA-47

SCH 3

Me

Ph

H

H

SO 2 Me

H

IIA-48

SCH 3

Me

Ph

H

H

CO 2 Me

H

IIA-49

SCH 3

Me

Ph

NO 2

H

H

H

IIA-50

SCH 3

Me

Ph

H

CN

H

H

IIA-51

SCH 3

Me

Ph

H

H

CN

H

IIA-52

SCH 3

Me

Ph

CHCH

H

H

H

IIA-53

SCH 3

Me

Ph

Me

F

H

H

IIA-54

SCH 3

Me

Ph

Cl

H

H

OMe

IIA-55

SCH 3

Me

Ph

H

Me

OMe

H

IIA-56

SCH 3

Me

Ph

Me

H

F

H

IIA-57

SCH 3

Me

Ph

SMe

H

H

H

IIA-58

SCH 3

Me

Ph

OMe

H

H

OMe

IIA-59

SCH 2 CH 3

Me

Ph

H

H

H

H

IIA-60

SCH 2 CH 3

Me

Ph

H

CN

H

H

IIA-61

SCH 2 CH 3

Me

Ph

H

H

CN

H

IIA-62

SCH 2 CH 3

Me

Ph

H

F

H

H

IIA-63

SCH 2 CH 3

Me

Ph

H

H

F

H

IIA-64

SCH 2 CH 3

Me

Ph

H

Me

CN

H

IIA-65

SCH 2 CH 3

Me

Ph

H

F

CN

H

IIA-66

SCH 2 CH 3

Me

Ph

H

H

SMe

H

IIA-67

SCH(CH 3 ) 2

Me

Ph

H

H

H

H

IIA-68

SCH 2 CH(CH 3 ) 2

Me

Ph

H

H

H

H

IIA-69

S-propyl

Me

Ph

H

H

H

H

IIA-70

S-butyl

Me

Ph

H

H

H

H

IIA-71

S-pentyl

Me

Ph

H

H

H

H

IIA-72

S-hexyl

Me

Ph

H

H

H

H

IIA-73

S-heptyl

Me

Ph

H

H

H

H

IIA-74

S-octyl

Me

Ph

H

H

H

H

IIA-75

SCH 2 CN

Me

Ph

H

H

H

H

IIA-76

SCH 2 CH 2 OCH 3

Me

Ph

H

H

H

H

IIA-77

SCH 2 CH 2 CF 3

Me

Ph

H

H

H

H

IIA-78

SCH 2 (cyclopropyl)

Me

Ph

H

H

H

H

IIA-79

SCH 2 C(═O)CH 3

Me

Ph

H

H

H

H

IIA-80

SCH 2 CH 2 N(CH 3 ) 2

Me

Ph

H

H

H

H

IIA-81

SCH 2 CH 2 NHCOCH 3

Me

Ph

H

H

H

H

IIA-82

SCH 2 CH 2 NHCO 2 CH 3

Me

Ph

H

H

H

H

IIA-83

SCH 2 CH 2 OC(═O)CH 3

Me

Ph

H

H

H

H

IIA-84

SCH 2 CH(NH 2 )CO 2 Et

Me

Ph

H

H

H

H

IIA-85

SCH 2 C≡CCH 3

Me

Ph

H

H

H

H

IIA-86

S-propyl

Me

Ph

H

H

COMe

H

IIA-87

S-propyl

Me

Ph

H

CN

H

H

IIA-88

S-propyl

Me

Ph

H

H

CN

H

IIA-89

S-propyl

Me

Ph

H

F

H

H

IIA-90

S-propyl

Me

Ph

H

H

F

H

IIA-91

S-propyl

Me

Ph

H

CN

F

H

IIA-92

S-propyl

Me

Ph

H

H

SMe

H

IIA-93

SCH 3

Me

Ph

H

H

NMe 2

H

IIA-94

SCH 3

Me

Ph

H

NO 2

H

H

IIA-95

SCH 3

Me

Ph

H

NHAc

H

H

IIA-96

SCH 3

Me

Ph

H

NH 2

H

H

IIA-97

SCH 3

Me

Ph

H

Me

H

H

IIA-98

SCH 3

Me

Ph

H

H

Me

H

IIA-99

S-butyl

Me

Ph

H

F

CN

H

IIA-100

S-butyl

Me

Ph

H

F

H

H

IIA-101

S-butyl

Me

Ph

H

H

CN

H

IIA-102

S-butyl

Me

Ph

H

Me

H

H

IIA-103

S-butyl

Me

Ph

H

CN

H

H

IIA-105

S-pentyl

Me

Ph

H

F

CN

H

IIA-106

S-pentyl

Me

Ph

H

CN

H

H

IIA-107

SCH 2 CH(CH 3 ) 2

Me

Ph

H

F

CN

H

IIA-108

SCH 2 CH(CH 3 ) 2

Me

Ph

H

CN

H

H

IIA-109

SCH 2 CH(CH 3 ) 2

Me

Ph

IIA-110

SCH 2 C≡CCH 3

Me

Ph

H

F

CN

H

IIA-111

SCH 2 C≡CCH 3

Me

Ph

H

CN

H

H

IIA-112

SCH 2 C≡CCH 3

Me

Ph

H

H

H

H

IIA-113

SCH 3

Me

Ph

H

CO 2 Et

H

H

IIA-114

SCH 3

Me

Ph

H

H

Cl

H

IIA-115

SCH 3

Me

Ph

H

Cl

H

H

IIA-116

SCH 3

Me

Ph

H

H

NO 2

H

IIA-117

SCH 3

Me

Ph

H

OCH 2 Ph

H

H

IIA-118

SCH 3

Me

Ph

H

H

OCH 2 Ph

H

IIA-119

SCH 3

Me

Ph

H

OH

H

H

IIA-120

SCH 3

Me

Ph

IIA-121

SCH 3

Me

Ph

IIA-122

SCH 3

Me

Ph

IIA-123

SCH 3

Me

2-Pyr

H

H

H

H

IIA-124

SCH 3

Me

2-Pyr

H

OCH 2 Ph

H

H

IIA-125

SCH 3

Me

3-Pyr

H

OCH 2 Ph

H

H

IIA-126

SCH 3

Me

4-Pyr

H

OCH 2 Ph

H

H

IIA-127

SCH 3

Me

Ph

H

Cl

H

H

IIA-128

SCH 3

Me

2-Pyr

H

H

OCH 2 Ph

H

IIA-129

CH 2 CH 2 SCH 3

Me

Ph

H

OCH 2 Ph

H

H

IIA-130

CH 2 CH 2 SCH 3

Me

Ph

H

OPh

H

H

IIA-131

CH 2 CH 2 SCH 3

Me

Ph

H

Cl

H

H

IIA-132

CH 2 CH 2 SCH 3

Me

Ph

H

OMe

H

H

IIA-133

CH 2 CH 2 SCH 3

Me

Ph

H

CO 2 CH 3

H

H

IIA-134

SCH 3

Me

Ph

H

OH

H

H.

9. A compound selected from:

No.

S-R

A

R 1

IIA-137

SCH 3

N

IIA-138

SCH 3

N

IIA-139

SCH 3

N

IIA-140

SCH 3

N

IIA-141

SCH 3

N

IIA-142

SCH 3

N

IIA-143

SCH 3

N

IIA-144

SCH 3

N

IIA-145

SCH 3

N

IIA-146

SCH 3

N

IIA-147

SCH 3

N

IIA-148

S-propyl

N

IIA-149

SCH 3

N

IIA-150

SCH 3

N

IIA-151

SCH 3

N

IIA-152

SCH 3

N

IIA-153

S-butyl

N

IIA-154

S-butyl

N

IIA-155

S—CH 2 CN

N

10. A compound selected from:

11. A compound selected from:

TABLE 5

No.

G

A

R 1

R 2

IC-2

—NH-propyl

N

phenyl

CH 3

IC-3

—NH-butyl

N

3-CN-phenyl

CH 3

IC-4

—NH-isobutyl

N

phenyl

CH 3

IC-5

—NH—CH 2 CH 2 N(CH 3 ) 2

N

3-OCH 3 -phenyl

CH 3

ID-1

—NH-phenyl

N

3-OCH 3 -phenyl

CH 3

ID-2

—NH-benzyl

N

phenyl

CH 3

ID-3

N

phenyl

CH 3

ID-4

N

3,5-(OCH 3 ) 2 -phenyl

CH 3

ID-5

N

3,5-(OCH 3 ) 2 -phenyl

CH 3

ID-6

N

3,5-(OCH 3 ) 2 -phenyl

CH 3

ID-7

N

3,5-(OCH 3 ) 2 -phenyl

CH 3

ID-8

N

3,5-(OCH 3 ) 2 -phenyl

CH 3

ID-9

N

phenyl

CH 3

IE-1

—O—CH 2 CH 2 N(CH 3 ) 2

N

4-CH 3 -phenyl

CH 3

IE-2

—O-isobutyl

N

phenyl

CH 3

IF-1

—O-benzyl

N

3,4-(OCH 3 ) 2 -phenyl

CH 3

IG-2

—SO 2 -butyl

N

phenyl

CH 3

IG-3

—SO 2 CH 3

N

3-OBn-phenyl

CH 3

IH-1

—SO 2 -phenyl

N

3-OCH 3 -phenyl

CH 3

IH-2

SO 2 -(4-CH 3 -phenyl)

N

3,4-(OCH 3 ) 2 -phenyl

CH 3

IH-2

SO 2 -(2-naphthyl)

N

3,4-(OCH 3 ) 2 -phenyl

CH 3

IJ-1

SO-butyl

N

phenyl

CH 3

IK-1

SO-phenyl

N

3-OCH 3 -phenyl

CH 3 .

12. A composition comprising a compound according to any one of claim 8 , 9 , 10 , or 11 , and a pharmaceutically acceptable carrier, adjuvant, or vehicle.

13. A method of inhibiting JNK3, Lck, or Src kinase activity in a biological sample comprising the step of contacting said biological sample with:

a) a compound according to any one of claim 8 , 9 , 10 , or or 11 ; or

b) a composition according to claim 12 .

14. A method of treating or lessening the severity of a JNK3-, Lck-, or Src-mediated disease or condition in a patient comprising the step of administering to said patient a composition according to claim 12 .

15. A method of treating or lessening the severity of an inflammatory disease, autoimmune disease, destructive bone disorder, proliferative disorder, infectious disease, neurodegenerative disease, allergy, reperfusion/ischemia in stroke, heart attack, angiogenic disorder, organ hypoxia, vascular hyperplasia, cardiac hypertrophy, thrombin-induced platelet aggregation or a condition associated with proinflammatory cytokines comprising the step of administering to said patient a composition according to claim 12 .

16. The method according to claim 15 , wherein said method is used to treat an inflammatory disease selected from acute pancreatitis, chronic pancreatitis, asthma, allergies, or adult respiratory distress syndrome.

17. The method according to claim 15 , wherein said method is used to treat an autoimmune disease selected from glomerulonephritis, rheumatoid arthritis, systemic lupus erythematosus, scleroderma, chronic thyroiditis, Graves' disease, autoimmune gastritis, diabetes, autoimmune hemolytic anemia, autoimmune neutropenia, thrombocytopenia, atopic dermatitis, chronic active hepatitis, myasthenia gravis, multiple sclerosis, inflammatory bowel disease, ulcerative colitis, Crohn's disease, psoriasis, or graft vs. host disease.

18. The method according to claim 15 , wherein said method is used to treat a destructive bone disorders selected from osteoarthritis, osteoporosis or multiple myeloma-related bone disorder.

19. The method according to claim 15 , wherein said method is used to treat a proliferative disease selected from acute myelogenous leukemia, chronic myelogenous leukemia, metastatic melanoma, Kaposi's sarcoma, or multiple myeloma.

20. The method according to claim 15 , wherein said method is used to treat neurodegenerative disease selected from Alzheimer's disease, Parkinson's disease, amyotrophic lateral sclerosis, Huntington's disease, cerebral ischemia or neurodegenerative disease caused by traumatic injury, glutamate neurotoxicity or hypoxia.

21. The method according to claim 15 , wherein said method is used to treat ischemia/reperfusion in stroke or myocardial ischemia, renal ischemia, heart attacks, organ hypoxia or thrombin-induced platelet aggregation.

22. The method according to claim 15 , wherein said method is used to treat a condition associated with T-cell activation or pathologic immune responses.

23. The method according to claim 15 , wherein said method is used to treat an angiogenic disorder selected from solid tumors, ocular neovasculization, or infantile haemangiomas.

24. The method according to claim 14 , wherein said disease is selected from hypercalcemia, restenosis, hypercalcemia, osteoporosis, osteoarthritis, symptomatic treatment of bone metastasis, rheumatoid arthritis, inflammatory bowel disease, multiple sclerosis, psoriasis, lupus, graft vs. host disease, T-cell mediated hypersensitivity disease, Hashimoto's thyroiditis, Guillain-Barre syndrome, chronic obtructive pulmonary disorder, contact dermatitis, cancer, Paget's disease, asthma, ischemic or reperfusion injury, allergic disease, atopic dermatitis, or allergic rhinitis.

25. The method according to claim 24 , wherein said disease is selected from hypercalcemia, osteoperosis, osteoarthritis, or sympomatic treatment of bone metastasis.

26. The method according to claim 14 , wherein said disease is selected from autoimmune diseases, allergies, rheumatoid arthritis, and leukemia.

Assignments (4)
RELEASE OF SECURITY INTEREST Recorded Oct 14, 2016
From: MACQUARIE US TRADING LLC
To: VERTEX PHARMACEUTICALS INCORPORATED; VERTEX PHARMACEUTICALS (SAN DIEGO) LLC
Reel/Frame 040357/0001 →
SECURITY INTEREST Recorded Jul 10, 2014
From: VERTEX PHARMACEUTICALS INCORPORATED; VERTEX PHARMACEUTICALS (SAN DIEGO) LLC
To: MACQUARIE US TRADING LLC
Reel/Frame 033292/0311 →
CORRECTIVE ASSIGNMENT TO CORRECT SERIAL NUMBER IN BOX 4 ON COVER SHEET PREVIOUSLY RECORDED AT REEL 012919 FRAME 0028. ASSIGNOR CONFIRMS THE ASSIGNMENT. Recorded Jul 24, 2006
From: CHOON-MOON, YOUNG
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 018034/0118 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 16, 2002
From: MOON, YOUNG CHON
To: VERTEX PHARMACEUTICALS INCORPORATED
Reel/Frame 012919/0028 →