IP Library Granted Patent US 7,230,095
Granted Patent B2
US 7,230,095 · App. 10/475,298 · Granted Jun 12, 2007

Immobilization of oligonucleotides onto solid supports

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Quick Facts
Patent No.
US 7,230,095
App. No.
10/475,298
Granted
Jun 12, 2007
Kind
B2
Abstract

A solid support bound polynucleotide, preferably a 3′-O- or 5′-O-substituted polynucleotide, is disclosed. The polynucleotides are of formula: wherein Q is a substantially pure polynucleotide, each X is O or S; Y is an inert spacer group; R represents the solid support. Also disclosed is a method of isolating a target biomolecule, preferably a protein or a polynucleotide, from a mixture.

Claims (31)

1. A solid support bound polynucleotide of the formula:

wherein:

Q is a substantially pure polynucleotide;

each X is independently O or S;

Y is an inert spacer group; and

R is a solid support;

the polynucleotide being bound to the solid support, R, via a phosphoramide linkage, or a phosphate ester linkage formed by esterifying a phosphate group with a hydroxy pendent from the solid support.

2. A solid support bound 3′-O- or 5′-O-substituted polynucleotide according to claim 1 wherein the 3′-O- or 5′-O-substituent is represented by the following structural formula:

wherein:

each X is independently O or S;

Y is an inert spacer group; and

R is a solid support; and the 3′-O- and 5′-O-substituted polynucleotide are substantially pure.

3. A solid support bound polynucleotide according to claim 1 or 2 , wherein Y is a straight chained hydrocarbyl group or a polyalkylene glycol group and each X is O.

4. A solid support bound polynucleotide according to claim 3 , wherein Y is a C3–C10 alkylene group.

5. A solid support bound polynucleotide according to claim 1 or 2 , wherein the polynucleotide is a polydeoxynucleotide.

6. A solid support bound polynucleotide according to claim 1 or 2 , wherein the polynucleotide is a polyribonucleotide.

7. A solid support bound polynucleotide according to claim 1 or 2 , wherein the solid support is amino sepharose, amino polystyrene, amino silica beads, silica control pore glass beads, an acrylate base amino support or a methacrylate base amino support.

8. A solid support bound polynucleotide according to claim 7 , wherein the solid support is amino sepharose.

9. A solid support bound polynucleotide according to claim 1 or 2 , wherein the polynucleotide selectively binds a target protein.

10. A method of preparing a solid support bound polynucleotide, said method comprising the step of esterifying or amidating the terminal phosphate of a 2′-O-, 3′-O- or 5′-O-substituted polynucleotide with an amine or hydroxyl group that is pendent from a solid support, wherein the 2′-O-, 3′-O- or the 5′-O-substituent is represented by the following structural formula:

and each X is independently O or S; and Y is a straight chained hydrocarbyl group or a polyalkylene glycol group.

11. The method of claim 10 wherein the terminal phosphate is esterified or amidated in the presence of 1 -(3-dimethylaminopropyl)-3-ethyl-carbodiimide.

12. The method of claim 10 or 11 , wherein the solid support is, amino sepharose, amino polystyrene, amino silica beads, silica control pore glass beads, an acrylate base amino support or a methacrylate base amino support.

13. The method of claim 12 , wherein the solid support is amino sepharose.

14. A method of isolating a target biomolecule from a mixture, said method comprising the steps of:

a) providing a solid support bound polynucleotide according to claim 1 or 2 , wherein the polynucleotide selectively binds the target biomolecule; and

b) contacting the mixture with the solid support bound polynucleotide under conditions suitable for binding the target biomolecule to the polynucleotide.

15. The method of claim 14 , wherein the target molecule is a target protein.

16. The method of claim 15 , further comprising the step of separating the solid support bound polynucleotide from the mixture and eluting the target protein from the polynucleotide.

17. The method of claim 14 , wherein the target molecule is a target polynucleotide which hybridizes to the solid support bound polynucleotide.

18. The method of claim 17 , further comprising the steps of separating the solid support bound polynucleotide from the mixture, denaturing the target polynucleotide from the solid support bound polynucleotide and isolating the target polynucleotide.

Assignments (3)
CHANGE OF NAME Recorded Jul 12, 2012
From: AVECIA BIOTECHNOLOGY INC
To: NITTO DENKO AVECIA, INC.
Reel/Frame 028549/0910 →
RELEASE OF GUARANTEE AND COLLATERAL AGREEMENT, ACKNOWLEDGEMENT AND CONFIRMATION OF GUARANTEE AND COLLATERAL AGREEMENT AND SECURITY INTEREST Recorded Feb 9, 2006
From: J.P. MORGAN EUROPE LIMITED (FORMERLY KNOWN AS CHASE MANHATTAN INTERNATIONAL LIMITED)
To: AVECIA INVESTMENTS LIMITED; AVECIA HOLDINGS INC.; AVECIA INC.; AVECIA BIOTECHNOLOGY INC.; AVECIA IPC INC.; NEORESINS INC.
Reel/Frame 017145/0397 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 21, 2003
From: SINHA, NANDA DULAL
To: AVECIA BIOTECHNOLOGY INC.
Reel/Frame 015077/0834 →