Method of screening cell death inhibitor
There is provided a method of screening for substance that inhibits cell death induced by activation of PARP, particularly a substance that is useful as a therapeutic and/or preventive agent for rheumatoid arthritis, neuronal death at the time of cerebral ischemia, cell death of the heart after myocardial infarction reperfusion, autoimmune destruction of β-cells of pancreatic islets of Langerhans, cell death after shock, or inflammatory reaction by immunocyte death. Also provided are a novel protein and a novel gene encoding the same. The aforementioned screening method comprises a step of allowing a test substance to contact a cell expressing an LTRPC2 protein under a conditions such that the LTRPC2 protein can be activated, and a step of analyzing inhibition of LTRPC2 protein activation. The aforementioned novel protein is a rat or mouse LTRPC2 protein, and the aforementioned novel gene is a rat or mouse LTRPC2 gene.
1. An isolated polypeptide selected from the group consisting of(a) a polypeptide which comprises the amino acid sequence represented by SEQ ID NO:4 or SEQ ID NO:14, and (b) a polypeptide which comprises the amino acid sequence of SEQ ID NO: 4 or SEQ ID NO:14 in which from one to five amino acids are substituted, deleted and/or inserted, and which has an activity to cause permeation of ions.
2. An isolated polypeptide which consists of the amino acid sequence represented by SEQ ID NO:4.
3. An isolated polynucleotide which encodes the polypeptide according to claim 1 or 2 .
4. An isolated polypeptide which consists of the amino acid sequence represented by SEQ ID NO:14.
5. An isolated polynucleotide which encodes the polypeptide according to claim 4 .
6. An expression vector which comprises the polynucleotide according to claim 3 .
7. An expression vector which comprises the polynucleotide according to claim 5 .
8. An isolated host cell which comprises the vector according to claim 6 .
9. An isolated host cell which comprises the vector according to claim 7 .
10. A process for producing the polypeptide according to claim 1 or 2 comprising, culturing an isolated host cell harboring an expression vector that comprises a polynucleotide encoding said polypeptide under conditions promoting expression of said polypeptide and recovering said polypeptide from the cell culture.
11. A process for producing the polypeptide according to claim 4 comprising, culturing an isolated host cell harboring an expression vector that comprises a polynucleotide encoding said polypeptide under conditions promoting expression of said polypeptide and recovering said polypeptide from the cell culture.
12. A method for determining whether a compound is an inhibitor of an ion channel, wherein said ion channel is comprised of a polypeptide selected from the group consisting of (a) a polypeptide represented by SEQ ID NO:2, (b) a polypeptide represented by SEQ ID NO:4, (c) a polypeptide with at least 84% sequence homology to the polypeptide represented by SEQ ID NO:2 wherein the polypeptide (c) has an activity to cause permeation of ions, and (d) a polypeptide with at least 84% sequence homology to the polypeptide represented by SEQ ID NO:4, wherein the polypeptide (d) has an activity to cause permeation of ions, said method comprising:
(A) contacting a cell expressing (i) PARP-1 and (ii) said polypeptide with (a) a test compound in the presence of an exogenous PARP-1 activator, wherein said PARP-1 activator activates, through PARP, an ion channel comprised of said polypeptide;
(B) measuring ion flow through said ion channel; and
(C) comparing the ion flow through said ion channel of (B) with the ion flow through an ion channel in a corresponding cell cultured in the presence of said exogenous PARP-1 activator and in the absence of said test compound, wherein when the ion flow through said ion channel is lower in the presence of said test compound than in the absence of said test compound, said test compound is determined to be an inhibitor of an ion channel.
13. The method of claim 12 , wherein said PARP-1 activator is H 2 O 2 or MNNG.
14. The method of claim 12 , wherein said cell is a eukaryotic cell.
15. The method of claim 12 , wherein flow through said ion channel is measured using a patch-clamp technique, influx or efflux of a radioisotopic ion, efflux of Rb + ion, or an intracellular Ca 2+ indicator.
16. The method of claim 12 , wherein the cell expresses a polypeptide having the amino acid sequence of SEQ ID NO:2, or SEQ ID NO:4.
17. A method for determining whether a test compound is an inhibitor of an ion channel, wherein said ion channel is comprised of a polypeptide represented by SEQ ID NO: 14, said method comprising:
(A) contacting a cell expressing (i) PARP-1 and (ii) said polypeptide with (a) a test compound in the presence of an exogenous PARP-1 activator, wherein said PARP-1 activator activates, through PARP, an ion channel comprised of said polypeptide;
(B) measuring ion flow through said ion channel; and
(C) comparing the ion flow through said ion channel of (B) with the ion flow through an ion channel in a corresponding cell cultured in the presence of said exogenous PARP-1 activator and in the absence of said test compound, wherein when the ion flow through said ion channel is lower in the presence of said test compound than in the absence of said test compound, said test compound is determined to be an inhibitor of an ion channel.