IP Library Granted Patent US 7,604,936
Granted Patent B2
US 7,604,936 · App. 10/512,028 · Granted Oct 20, 2009

Methods and compositions for diagnosis and monitoring auto immune and chronic inflammatory diseases

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Quick Facts
Patent No.
US 7,604,936
App. No.
10/512,028
Granted
Oct 20, 2009
Kind
B2
Abstract

Methods of diagnosing or monitoring auto immune and chronic inflammatory diseases, particularly systemic lupus erythematosis and rheumatoid arthritis, in a patient by detecting the expression level of one or more genes in a patient, are described. Diagnostic oligonucleotides for diagnosing or monitoring auto immune and chronic inflammatory diseases, particularly systemic lupus erythematosis and rheumatoid arthritis and kits or systems containing the same are also described.

Claims (12)

1. A method of diagnosing or monitoring an autoimmune or chronic inflammatory disease in a patient, comprising detecting the expression level of a gene in said patient to diagnose or monitor said auto immune or chronic inflammatory disease in said patient wherein said gene comprises the nucleotide sequence of SEQ ID NO:739.

2. The method of claim 1 , wherein said auto immune or chronic inflammatory disease is selected from the group consisting of: Rheumatoid Arthritis, Cholecystitis, Systemic Lupus Erythematosis, Sjogrens Disease, CREST syndrome, Scleroderma, Ankylosing Spondylitis, Crohn's, Ulcerative Colitis, Primary Sclerosing Cholangitis, Appendicitis, Diverticulitis, Primary Biliary Sclerosis, Wegener's Granulomatosis, Polyarteritis nodosa, Whipple's Disease, Psoriasis, Microscopic Polyanngiitis, Takayasu's Disease, Kawasaki's Disease, Autoimmune hepatitis, Asthma, Churg-Strauss Disease, Beurger's Disease, Raynaud's Disease, and Cholecystitis.

3. The method of claim 1 wherein said disease is Systemic Lupus Erythematosis.

4. The method of claim 1 wherein said disease is Rheumatoid Arthritis.

5. The method of claim 1 wherein said expression level is detected by measuring the RNA level expressed by said gene.

6. The method of claim 5 , further including isolating RNA from said patient prior to detecting said RNA level expressed by said gene.

7. The method of claim 6 wherein said RNA level is detected by PCR.

8. The method of claim 6 wherein said RNA level is detected by hybridization.

9. The method of claim 6 wherein said RNA level is detected by hybridization to an oligonucleotide.

10. The method of claim 9 wherein said oligonucleotide comprises DNA, RNA, cDNA, PNA, genomic DNA, or synthetic oligonucleotides.

11. The method of claim 1 , wherein said expression level detected is expression level in the patient's bodily fluid.

12. The method of claim 11 , wherein said bodily fluid is peripheral blood.

Assignments (21)
CORRECTIVE ASSIGNMENT TO CORRECT THE CONVEYING DATA AND RECEIVING DATA PREVIOUSLY RECORDED AT REEL: 047795 FRAME: 0361. ASSIGNOR(S) HEREBY CONFIRMS THE RELEASE OF SECURITY INTEREST IN PATENTS. Recorded Dec 18, 2018
From: PERCEPTIVE CREDIT HOLDINGS II, LP
To: CAREDX, INC.
Reel/Frame 047950/0647 →
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE'S ADDRESS PREVIOUSLY RECORDED AT REEL: 047731 FRAME: 0947. ASSIGNOR(S) HEREBY CONFIRMS THE SECURITY INTEREST. Recorded Dec 12, 2018
From: CAREDX, INC.
To: PERCEPTIVE CREDIT HOLDINGS II, LP
Reel/Frame 047795/0361 →
RELEASE OF SECURITY INTEREST Recorded Dec 10, 2018
From: CAREDX, INC.
To: PERCEPTIVE CREDIT HOLDINGS II, LP
Reel/Frame 047731/0947 →
SECURITY AGREEMENT Recorded Apr 18, 2018
From: CAREDX, INC.
To: PERCEPTIVE CREDIT HOLDINGS II, LP
Reel/Frame 045781/0128 →
RELEASE OF SECURITY INTEREST Recorded Mar 30, 2018
From: JGB COLLATERAL, LLC
To: CAREDX, INC.
Reel/Frame 045398/0036 →
RELEASE OF SECURITY INTEREST Recorded Mar 28, 2017
From: EAST WEST BANK
To: CAREDX, INC.
Reel/Frame 041771/0524 →
SECURITY INTEREST Recorded Mar 22, 2017
From: CAREDX, INC.
To: JGB COLLATERAL, LLC
Reel/Frame 041681/0307 →
SECURITY INTEREST Recorded Jun 27, 2016
From: CAREDX, INC.
To: EAST WEST BANK
Reel/Frame 039022/0094 →
CHANGE OF NAME Recorded Jan 26, 2015
From: XDX, INC.
To: CAREDX, INC.
Reel/Frame 034817/0192 →
RELEASE OF SECURITY INTEREST Recorded Sep 24, 2012
From: LABORATORY CORPORATION OF AMERICA HOLDINGS
To: GENERAL ELECTRIC CAPITAL CORPORATION, AS AGENT; XDX, INC.
Reel/Frame 029033/0154 →
RELEASE OF SECURITY INTEREST Recorded Aug 17, 2012
From: GENERAL ELECTRIC CAPITAL CORPORATION, AS AGENT
To: XDX, INC.
Reel/Frame 028805/0922 →
RELEASE OF SECURITY INTEREST Recorded Aug 9, 2012
From: LEADER VENTURES, LLC
To: XDX, INC.
Reel/Frame 028757/0096 →
NONDISTURBANCE AND ATTORNMENT AGREEMENT Recorded May 14, 2012
From: XDX, INC.; GENERAL ELECTRIC CAPITAL CORPORATION, AS AGENT
To: LABORATORY CORPORATION OF AMERICA HOLDINGS
Reel/Frame 028201/0100 →
CORRECTIVE ASSIGNMENT TO CORRECT THE /REMOVE PATENTS 7118865, 7571055 AND 11/538,348 MISTAKENLY LISTED; AGREEMENT SHOULD NOT HAVE BEEN RECORDED AGAINST THEM. PREVIOUSLY RECORDED ON REEL 026066 FRAME 0125. ASSIGNOR(S) HEREBY CONFIRMS THE SECURITY AGREEMENT. Recorded Dec 6, 2011
From: XDX, INC.
To: GENERAL ELECTRIC CAPITAL CORPORATION, AS AGENT
Reel/Frame 027330/0695 →
SECURITY AGREEMENT Recorded Mar 31, 2011
From: XDX, INC.
To: GENERAL ELECTRIC CAPITAL CORPORATION, AS AGENT
Reel/Frame 026066/0125 →
RELEASE OF SECURITY INTEREST Recorded Jan 20, 2011
From: TRIPLEPOINT CAPITAL LLC
To: XDX, INC.
Reel/Frame 025671/0583 →
SECURITY AGREEMENT Recorded Aug 31, 2009
From: XDX, INC.
To: LEADER VENTURES, LLC, AS AGENT
Reel/Frame 023163/0695 →
SECURITY AGREEMENT Recorded Aug 31, 2009
From: XDX, INC.
To: TRIPLEPOINT CAPITAL LLC
Reel/Frame 023163/0704 →
CHANGE OF NAME Recorded Oct 25, 2007
From: EXPRESSION DIAGNOSTICS, INC.
To: XDX, INC.
Reel/Frame 020017/0910 →
CHANGE OF NAME Recorded Jun 6, 2005
From: EXPRESSION DIAGNOSTICS, INC.
To: EXPRESSION DIAGNOSTICS, INC. DBA XDX, INC.
Reel/Frame 016306/0642 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 10, 2005
From: WOHLGEMUTH, JAY; FRY, KIRK; WOODWARD, ROBERT; LY, NGOC
To: EXPRESSION DIAGNOSTICS, INC.
Reel/Frame 015576/0994 →