IP Library Granted Patent US 7,759,093
Granted Patent B2
US 7,759,093 · App. 10/547,957 · Granted Jul 20, 2010

Amylases, nucleic acids encoding them and methods for making and using them

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Quick Facts
Patent No.
US 7,759,093
App. No.
10/547,957
Granted
Jul 20, 2010
Kind
B2
Abstract

In one aspect, the invention is directed to polypeptides having an amylase activity, polynucleotides encoding the polypeptides, and methods for making and using these polynucleotides and polypeptides. In one aspect, the polypeptides of the invention can be used as amylases, for example, alpha amylases, to catalyze the hydrolysis of starch into sugars. In one aspect, the invention provides delayed release compositions comprising an desired ingredient coated by a latex polymer coating.

Claims (43)

1. An isolated, synthetic, or recombinant polypeptide having alpha-amylase activity comprising:

(a) an amino acid sequence having at least 90% sequence identity to the sequence SEQ ID NO: 419, or a fragment thereof having alpha-amylase activity; or

(b) the polypeptide of (a) lacking a signal sequence.

2. A protein preparation comprising the polypeptide of claim 1 , wherein the protein preparation comprises a liquid, a solid or a gel.

3. A fusion protein comprising

the polypeptide of claim 1 and a second domain.

4. An immobilized polypeptide, wherein the polypeptide comprises

a sequence as set forth in claim 1 .

5. An array comprising an immobilized polypeptide of claim 1 .

6. A composition comprising the polypeptide of claim 1 .

7. A food, feed, food supplement or feed supplement for an animal, an edible material or an edible enzyme delivery matrix, comprising the polypeptide of claim 1 .

8. A food supplement, feed supplement, feed or a food comprising the polypeptide of claim 1 .

9. A detergent composition comprising the polypeptide of claim 1 .

10. A high-maltose or a high-glucose liquid or syrup comprising the polypeptide of claim 1 .

11. An alcoholic beverage comprising the polypeptide of claim 1 .

12. A beer comprising the polypeptide of claim 1 .

13. An oral care product comprising the polypeptide of claim 1 .

14. A delayed release or controlled release composition comprising

the polypeptide of claim 1 .

15. The isolated, synthetic, or recombinant polypeptide of claim 1 , wherein the polypeptide comprises at least one glycosylation site.

16. A method for hydrolyzing a starch, or removing or liquefying the starch, comprising the following steps:

(a) providing a polypeptide having alpha amylase activity, wherein the polypeptide comprises the polypeptide of claim 1 ;

(b) providing a composition comprising starch; and

(c) contacting the polypeptide of step (a) with the composition of step (b) under conditions wherein the polypeptide hydrolyzes the starch, or removes or liquefies the starch.

17. A method for hydrolyzing starch in a food supplement or feed supplement, or a feed or a food prior to consumption by an animal comprising the following steps:

(a) obtaining a feed or food material, or a food supplement or feed supplement, comprising starch, wherein the starch can be hydrolyzed by a polypeptide having alpha-amylase activity, wherein the polypeptide comprises the polypeptide of claim 1 ; and

(b) adding the polypeptide of step (a) to the feed or food material, or food supplement or feed supplement, in an amount sufficient for a sufficient time period to cause hydrolysis of the starch and formation of a treated food or feed food supplement or feed supplement, thereby hydrolyzing the starch in the food supplement, feed supplement, food or the feed prior to consumption by the animal.

18. A method for producing a high-maltose or a high-glucose syrup comprising the following steps:

(a) providing a polypeptide having alpha amylase activity, wherein the polypeptide comprises the polypeptide of claim 1 ;

(b) providing a composition comprising a starch; and

(c) contacting the polypeptide of step (a) and the composition of step (b) under conditions wherein the polypeptide of step (a) can hydrolyze the composition of step (b), thereby producing a high-maltose or a high-glucose syrup.

19. A method for washing an object comprising the following steps:

(a) providing a composition comprising a polypeptide having alpha amylase activity, wherein the polypeptide comprises the polypeptide of claim 1 ;

(b) providing an object; and

(c) contacting the polypeptide of step (a) and the object of step (b) under conditions wherein the composition can wash the object.

20. A method for using amylase in brewing or alcohol production comprising the following steps:

(a) providing a polypeptide comprising the polypeptide of claim 1 ;

(b) providing a composition used for brewing or in alcohol production comprising starch; and

(c) combining the polypeptide of step (a) with the composition of the step (b) under conditions wherein the polypeptide can hydrolyze the starch in the composition used for brewing or alcohol production.

21. A method for producing a food or feed comprising a alpha amylase, the method comprising the steps of:

(a) providing a polypeptide having alpha-amylase activity, wherein the polypeptide comprises the polypeptide of claim 1 ;

(b) providing a composition comprising a food or feed; and

(c) mixing the alpha-amylase and the feed-comprising composition, thereby producing a food or feed comprising a alpha amylase.

Assignments (6)
RELEASE OF SECURITY INTEREST Recorded Jan 9, 2014
From: ATHYRIUM OPPORTUNITIES FUND (A) LP
To: VERENIUM CORPORATION
Reel/Frame 031956/0016 →
NOTICE OF GRANT OF SECURITY INTEREST IN PATENTS Recorded Dec 11, 2012
From: VERENIUM CORPORATION
To: ATHYRIUM OPPORTUNITIES FUND (A) LP
Reel/Frame 029444/0119 →
RELEASE OF SECURITY INTEREST Recorded Jun 1, 2012
From: COMERICA BANK
To: VERENIUM CORPORATION
Reel/Frame 028300/0200 →
SECURITY AGREEMENT Recorded Oct 21, 2011
From: VERENIUM CORPORATION, A DELAWARE CORPORATION
To: COMERICA BANK, A TEXAS BANKING ASSOCIATION
Reel/Frame 027099/0408 →
CHANGE OF NAME Recorded Dec 18, 2007
From: DIVERSA CORPORATION
To: VERENIUM CORPORATION
Reel/Frame 020261/0084 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 13, 2006
From: CALLEN, WALTER; RICHARDSON, TOBY; FREY, GERHARD; GRAY, KEVIN; KEROVUO, JANNE S.; SLUPSKA, MALGORZATA; BARTON, NELSON; O'DONOGHUE, EILEEN; MILLER, CARL
To: DIVERSA CORPORATION
Reel/Frame 018390/0416 →