Fluorescent light detection

1. A fluorescent light detection system for analyzing biological samples comprising:

at least one NA enhancing optical element; and

at least one housing for the samples,

wherein the NA enhancing optical element is constructed of a first material and the housing is constructed of a second material, wherein the first material has a greater index of refraction than the second material, and

wherein the samples being detected are located in a source plane offset from the theoretical aplanatic source plane of the NA enhancing optical element.

2. The system of claim 1 , wherein the offset is configured to provide corrective aberration.

3. The system of claim 1 , wherein the NA enhancing optical element is a truncated sphere.

4. The system of claim 3 , wherein the truncated sphere is truncated such that the source plane substantially intersects the center of the housings.

5. A fluorescent light detection system for analyzing biological samples comprising:

a NA enhancing optical element;

a plurality of housings for the samples;

a mask comprising at least one aperture adapted to reduce cross-talk of fluorescent light from the samples; and

a translation mechanism, wherein the translation mechanism is adapted to move at least one of the NA enhancing optical element, the plurality of housings, and the mask.

6. The system of claim 5 , wherein the NA enhancing optical element is a truncated sphere.

7. The system of claim 6 , wherein the mask is positioned between a back end of the truncated sphere and the plurality of housings.

8. The system of claim 7 , wherein the mask is coupled to the back end of the truncated sphere.

9. The system of claim 6 , wherein the mask is positioned between a front end of the truncated sphere and the detector.

10. The system of claim 6 , further comprising a detector adapted to detect fluorescent light from multiple housings per cycle.

11. The system of claim 6 , wherein the detector provides time-delay integration.

12. The system of claim 6 , wherein the detector is tilted to reduce chromatic aberration.

13. The system of claim 6 , further comprising a detector adapted to detect fluorescent light from one housing per cycle.

14. The system of claim 6 , wherein the translation mechanism provides translation of a detection zone, wherein the translation substantially matches the speed of the samples in the housings.

15. The system of claim 6 , wherein the mask comprises multiple apertures adapted to correspond to non-adjacent housings.

16. The system of claim 6 , further comprising a grating adapted to provide fluorescent light from multiple dyes to a detector.

17. A fluorescent light detection method for analyzing biological samples comprising:

enhancing the NA of the system with a NA enhancing optical element; and

reducing cross-talk between fluorescent light from samples in a plurality of housings.

18. The method of claim 17 , wherein enhancing NA comprises truncating a spherical lens, and coupling the truncated sphere to at least one housing, wherein the spherical lens is constructed of a first material and the housing is constructed of a second material, such that the first material has a greater index of refraction than the second material.

19. The method of claim 18 , wherein reducing cross-talk comprises positioning a mask between the truncated sphere and the plurality of housings.

20. The method of claim 19 , wherein positioning the mask further comprises translating the plurality of housings.

21. The method of claim 19 , wherein positioning the mask further comprises translating the truncated sphere and the mask.

22. The method of claim 19 , wherein positioning the mask further comprises translating the mask.

23. The method of claim 18 , reducing cross-talk comprises positioning a mask between the truncated sphere and a detector.

24. The method of claim 23 , wherein positioning the mask further comprises translating the mask.

25. A fluorescent light detection system for analyzing samples comprising:

means for enhancing NA;

means for housing the samples; and

means for reducing cross-talk of fluorescent light from samples in multiple means for housing.

26. A fluorescent light detection system for analyzing samples comprising:

means for enhancing NA;

means for housing the samples;

means for reducing cross-talk of fluorescent light from samples in multiple means for housing; and

means for correcting aberration.