Amide derivatives as PDGFR modulators
The invention provides methods and compositions for treating conditions mediated by PDGFR wherein derivatives of amide compounds are employed. The invention also provides methods of using the compounds and/or compositions in the treatment of a variety of diseases and unwanted conditions in subjects.
1 . A method of modulating PDGF-R, said method comprising administering a therapeutically effective amount of a compound, corresponding to Formula (IA):
wherein:
M is substituted or unsubstituted heteroaryl, or substituted or unsubstituted aryl;
N is a substituted or unsubstituted aryl, or substituted or unsubstituted hetroaryl; and
K is
Y is O or S;
each R k is independently H, halogen, substituted or unsubstituted alkyl, —OH, substituted or unsubstituted alkoxy, —OC(O)R 2 , —NO 2 , —N(R 2 ) 2 , —SR 2 , —C(O)R 2 , —C(O) 2 R 2 , —C(O)N(R 2 ) 2 , or —N(R 2 )C(O)R 2 ,
each R 2 is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocyclyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; or wherein two R 2 groups are linked together by an optionally substituted alkylene; and
each n is independently 0, 1, 2, 3 or 4;
or an active metabolite, or a pharmaceutically acceptable prodrug, isomer, spharmaceutically acceptable salt or solvate thereof.
2 . The method of claim 1 , wherein said compound corresponds to Formula (IB):
wherein:
each Z is independently C, CR 3 , N, NR 3 , O, or S, provided that no more than two Z's are heteroatoms and wherein no two adjacent Z's are O or S,
where R 3 is H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heteroaryl, or substituted or unsubstituted aryl; and
each R 1 is independently H, halogen, substituted or unsubstituted alkyl, substituted or unsubstituted alkoxy, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocyclyl, substituted or unsubstituted aryl, substituted or unsubstituted heteroaryl, —OR c —OH, —OC(O)R c , —NO 2 , —N(R c ) 2 , —SR c , S(O) j R c where j is 1 or 2, —NR c C(O)R c , —C(O)N(R c ) 2 , C(O) 2 R c , or —C(O)R c ; or two adjacent R 1 's, are taken together to form a substituted or unsubstituted aryl or heteroaryl, where
each R c is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.
3 . The method of claim 2 , wherein said compound corresponds to Formula (I):
wherein K is
each R k is independently H, halogen, substituted or unsubstituted alkyl, or substituted or unsubstituted alkoxy.
4 . The method of claim 3 , wherein said compound corresponds to Formula (II):
5 . The method of claim 4 , wherein said compound corresponds to Formula (III):
wherein Z 1 is CR 3 or N; and Z 2 is O or S.
6 . The method of claim 5 , wherein said compound corresponds to Formula (IV):
wherein:
each R 1 is independently H, halogen, substituted or unsubstituted alkyl, —O(substituted or unsubstituted alkyl), —O(substituted or unsubstituted alkenyl), —NR c (O)O(substituted or unsubstituted alkyl), —NR c C(O) (substituted or unsubstituted alkyl), —NR c C(O)(substituted or unsubstituted alkenyl), —C(O)NR c (substituted or unsubstituted alkyl), —C(O)NR c (substituted or unsubstituted alkenyl), —NO 2 , —S(═O)R c , —SR c , C(O) 2 R c , or —C(O)R c ; and
each R 2 is independently H or substituted or unsubstituted alkyl.
7 . The method of claim 5 , wherein said compound corresponds to Formula (V):
8 . The method of claim 7 , wherein said compound is selected from the group consisting of:
9 . The method of claim 4 , wherein said compound corresponds to Formula (VI):
wherein Z 1 is O or S; and Z 2 is CR 3 or N.
10 . The method of claim 9 , wherein said compound corresponds to Formula (VII):
wherein:
each R 1 is independently H, halogen, substituted or unsubstituted alkyl, —O(substituted or unsubstituted alkyl), —O(substituted or unsubstituted alkenyl), —NR c C(O)O(substituted or unsubstituted alkyl), —NR c C(O)(substituted or unsubstituted alkyl), —NR c C(O)(substituted or unsubstituted alkenyl), —C(O)NR c (substituted or unsubstituted alkyl), —C(O)NR c (substituted or unsubstituted alkenyl), —NO 2 , —S(═O)R c , —SR c , C(O) 2 R c , or —C(O)R c ; and
each R 2 is independently H or substituted or unsubstituted alkyl, or two R 2 groups are linked together to form an optionally substituted alkylene.
11 . The method of claim 9 , wherein said compound corresponds to Formula (VIII):
12 . The method of claim 11 , wherein said compound is selected from the group consisting of:
13 . The method of claim 5 , wherein said compound corresponds to Formula (IX):
wherein:
L is a linker selected from the group consisting of a covalent bond, substituted or unsubstituted alkenylene, substituted or unsubstituted alkylene, —C(O)NH—, —C(O)—, —NH—, —O—, —S—, —O(substituted or unsubstituted alkylene)-, —N(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkenylene)- —NHC(O)(substituted or unsubstituted alkylene)-, —NHC(O)(substituted or unsubstituted alkenylene)-, —C(O) (substituted or unsubstituted alkenylene)-, and —NHC(O) (substituted or unsubstituted alkylene)S(substituted or unsubstituted alkylene)C(O)NH—; and
T is a mono-, bi-, or tricyclic, substituted or unsubstituted cycloalkyl, heterocyclyl, aryl, or heteroaryl.
14 . The method of claim 13 , wherein T of said compound corresponds to Formula (X):
wherein A is a substituted or unsubstituted five or six-membered heterocyclyl, aryl, or heteroaryl; and B is a substituted or unsubstituted five or six-membered heterocyclene, arylene, or heteroarylene, wherein A and B together form a fused two ring moiety.
15 . The method of claim 14 , wherein said compound corresponds to Formula (XI):
16 . The method of claim 15 , wherein L of said compound is a covalent bond, —C(O)NH(substituted or unsubstituted alkylene), —NHC(O)—, —NHC(O)(substituted or unsubstituted alkylene)-, —NH—, or —O(substituted or unsubstituted alkylene)-.
17 . The method of claim 16 , wherein said compound corresponds to Formula (XII):
18 . The method of claim 17 , wherein B of said compound is a substituted or unsubstituted five-membered heteroarylene.
19 . The method of claim 18 , wherein said five-membered heteroarylene is substituted or unsubstituted thiophenylene.
20 . The method of claim 19 , wherein said compound is selected from the group consisting of:
21 . The method of claim 18 , wherein B is substituted or unsubstituted imidazolylene.
22 . The method of claim 21 , wherein said compound is selected from the group consisting of:
23 . The method of claim 18 , wherein B is substituted or unsubstituted pyrrolylene.
24 . The method of claim 23 , wherein said compound is selected from the group consisting of:
25 . The method of claim 17 , wherein B of said compound is a substituted or unsubstituted 6-membered arylene or heteroarylene.
26 . The method of claim 25 , wherein B is substituted or unsubstituted phenylene.
27 . The method of claim 26 , wherein said compound is selected from the group consisting of:
28 . The method of claim 25 , wherein B is substituted or unsubstituted pyridinylene or pyridazine.
29 . The method of claim 28 , wherein said compound is selected from the group consisting of:
30 . The method of claim 16 , wherein said compound corresponds to Formula (XIII):
31 . The method of claim 30 , wherein B of said compound is a substituted or unsubstituted six-membered heteroarylene.
32 . The method of claim 31 , wherein said six-membered heteroarylene is substituted or unsubstituted pyrimidinylene.
33 . The method of claim 32 , wherein said compound is selected from the group consisting of:
34 . The method of claim 16 , wherein L of said compound —OCH 2 —.
35 . The method of claim 34 , wherein said compound is selected from the group consisting of:
36 . The method of claim 13 , wherein said compound is selected from the group consisting of:
37 . The method of claim 5 , wherein said compound corresponds to Formula (XIV):
wherein:
L is a linker selected from the group consisting of a covalent bond, substituted or unsubstituted alkenylene, substituted or unsubstituted alkylene, —C(O)NH—, —C(O)—, —NH—, —O—, —S—, —O(substituted or unsubstituted alkylene)-, —N(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkenylene)- —NHC(O)(substituted or unsubstituted alkylene)-, —NHC(O)(substituted or unsubstituted alkenylene)-, —C(O)(substituted or unsubstituted alkenylene)-, and —NHC(O)(substituted or unsubstituted alkylene)S(substituted or unsubstituted alkylene)C(O)NH—; and
each of X 1 -X 5 is independently C, CR, N, NR, S, or O, wherein no more than three of X 1 -X 5 is a heteroatom, and no two adjacent ring atoms are O or S; where each R is independently H, halogen, substituted or unsubstituted alkyl, —OH, substituted or unsubstituted alkoxy, —OC(O)R d , —NO 2 , —N(R d ) 2 , —SR d , —S(O) j R d where j is 1 or 2, —NR d C(O)R d , —C(O) 2 R d , —C(O)N(R d ) 2 or —C(O)R d , or two adjacent R's are taken together to form a substituted or unsubstituted aryl or hetroaryl, where
each R d is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted aryl or substituted or unsubstituted heteroaryl.
38 . The method of claim 37 , wherein said compound corresponds to Formula (XV):
39 . The method of claim 38 , wherein L of said compound is a covalent bond, —C(O)NH—, or —O(substituted or unsubstituted alkylene)-.
40 . The method of claim 39 , wherein
of said compound is selected from the group consisting of:
41 . The method of claim 40 , wherein said compound is selected from the group consisting of:
42 . The method of claim 5 , wherein said compound corresponds to Formula (XVI):
wherein:
L is a linker selected from the group consisting of a covalent bond, substituted or unsubstituted alkenylene, substituted or unsubstituted alkylene, —C(O)NH—, —C(O)—, —NH—, —O—, —S—, —O(substituted or unsubstituted alkylene)-, —N(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkenylene)- —NHC(O)(substituted or unsubstituted alkylene)-, —NHC(O)(substituted or unsubstituted alkenylene)-, —C(O)(substituted or unsubstituted alkenylene)-, and —NHC(O)(substituted or unsubstituted alkylene)S(substituted or unsubstituted alkylene)C(O)NH—; and
each of X 1 -X 5 is independently C, CR, N—O, or N, wherein no more than two of X 1 -X 5 is N, where
each R is independently H, halogen, substituted or unsubstituted alkyl, —OH, substituted or unsubstituted alkoxy, —OC(O)R d , —NO 2 , —N(R d ) 2 , —SR d , —S(O) j R d where j is 1 or 2, —NR d C(O)R d , —C(O) 2 R d , —C(O)N(R d ) 2 or —C(O)R d , or two adjacent R's are taken together to form a substituted or unsubstituted aryl or hetroaryl, where
each R d is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted aryl or substituted or unsubstituted heteroaryl.
43 . The method of claim 42 , wherein said compound corresponds to Formula (XVII):
44 . The method of claim 43 , wherein L is a linker selected from the group consisting of a covalent bond, -(substituted or unsubstituted alkylene), —NHC(O)—, —C(O)NH(substituted or unsubstituted alkylene)-, —NHC(O)(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkenylene)-, —NHC(O)(substituted or unsubstituted alkenylene)-, and —O(substituted or unsubstituted alkylene)-,
45 . The method of claim 44 , wherein said compound is:
46 . The method of claim 43 , wherein said compound corresponds to Formula (XVIII):
47 . The method of claim 46 , wherein said compound corresponds to Formula (XIX):
48 . The method of claim 47 , wherein said compound is selected from the group consisting of:
49 . The method of claim 46 , wherein said compound corresponds to Formula (XX):
50 . The method of claim 49 , wherein said compound is selected from the group consisting of:
51 . The method of claim 43 , wherein said compound corresponds to Formula (XXI):
52 . The method of claim 51 , wherein said compound is selected from the group consisting of:
53 . The method of claim 43 , wherein said compound corresponds to Formula (XXII):
54 . The method of claim 53 , wherein said compound is selected from the group consisting of:
55 . The method of claim 43 , wherein said compound corresponds to Formula (XXIII):
56 . The method of claim 55 , wherein said compound is selected from the group consisting of:
57 . The method of claim 43 , wherein said compound corresponds to Formula (XXIV):
58 . The method of claim 57 , wherein said compound is selected from the group consisting of:
59 . The method of claim 43 , wherein said compound corresponds to Formula (XXV):
60 . The method of claim 59 , wherein L of said compound is —OCH 2 — or —OCH 2 CHCH—.
61 . The method of claim 60 , wherein said compound is selected from the group consisting of:
62 . The method of claim 59 , wherein L of said compound is —NHC(O)—.
63 . The method of claim 62 , wherein said compound is selected from the group consisting of:
64 . The method of claim 59 , wherein L of said compound is a covalent bond, substituted or unsubstituted alkylene, —NHC(O)(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkenylene)-, or —NHC(O)(substituted or unsubstituted alkenylene)-.
65 . The method of claim 64 , wherein said compound is selected from the group consisting of:
66 . The method of claim 4 , wherein said compound corresponds to Formula (XXVI):
wherein:
L is a linker selected from the group consisting of a covalent bond, substituted or unsubstituted alkenylene, substituted or unsubstituted alkylene, —C(O)NH—, —C(O)—, —NH—, —O—, —S—, —O(substituted or unsubstituted alkylene)-, —N(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkenylene)- —NHC(O)(substituted or unsubstituted alkylene)-, —NHC(O)(substituted or unsubstituted alkenylene)-, —C(O)(substituted or unsubstituted alkenylene)-, and —NHC(O)(substituted or unsubstituted alkylene)S(substituted or unsubstituted alkylene)C(O)NH—; and
each of X 1 -X 5 is independently C, CR, NR, O, S, or N, wherein no more than two of X 1 -X 5 is a hetroatom, and no two adjacent ring atoms are O or S, where
each R is independently H, halogen, substituted or unsubstituted alkyl, —OH, substituted or unsubstituted alkoxy, —OC(O)R d , —NO 2 , —N(R d ) 2 , —SR d , —S(O) j R d where j is 1 or 2, —NR d C(O)R d , —C(O) 2 R d , —C(O)N(R d ) 2 or —C(O)R d , or two adjacent R's are taken together to form a substituted or unsubstituted aryl or hetroaryl, where
each R d is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted aryl or substituted or unsubstituted heteroaryl.
Z 1 is O or S; and
Z 2 is CR 3 or N.
67 . The method of claim 66 , wherein said compound corresponds to Formula (XXVII):
68 . The method of claim 67 , wherein said compound is
69 . The method of claim 5 , wherein said compound corresponds to Formula (XXVIII):
wherein:
each of L and L 1 is independently a linker selected from the group consisting of a covalent bond, substituted or unsubstituted alkenylene, substituted or unsubstituted alkylene, —C(O)NH—, —C(O)—, —NH—, —O—, —S—, —O(substituted or unsubstituted alkylene)-, —N(substituted or unsubstituted alkylene)-, —C(O)NH(substituted or unsubstituted alkylene), —C(O)NH(substituted or unsubstituted alkenylene)- —NHC(O)(substituted or unsubstituted alkylene)-, —NHC(O)(substituted or unsubstituted alkenylene)-, —C(O)(substituted or unsubstituted alkenylene)-, and —NHC(O)(substituted or unsubstituted alkylene)S(substituted or unsubstituted alkylene)C(O)NH—;
U is a substituted or unsubstituted cycloalkyl, heterocycloalkyl, aryl, or heteroaryl; and
V is a substituted or unsubstituted cycloalkylene, heterocyclene, arylene, or heteroarylene.
70 . The method of claim 69 , wherein said compound corresponds to Formula (XXIX):
71 . The method of claim 70 , wherein said compound is
72 . The method of claim 70 , wherein said compound corresponds to Formula (XXX):
73 . The method of claim 72 , wherein said compound is selected from the group consisting of:
74 . The method of claim 70 , wherein said compound corresponds to Formula (XXXI):
wherein:
each of X 1 -X 5 is independently C, CR, N, NR, S, or O, wherein no more than three of X 1 -X 5 is a heteroatom, and no two adjacent ring atoms are S or O; and
each R is independently H, halogen, substituted or unsubstituted alkyl, —OH, substituted or unsubstituted alkoxy, —OC(O)R d , —NO 2 , —N(R d ) 2 , —SR d , —S(O) j R d where j is 1 or 2, —NR d C(O)R d , —C(O) 2 R d , —C(O)N(R d ) 2 or —C(O)R d , or two adjacent R's are taken together to form a substituted or unsubstituted aryl or hetroaryl, where
each R d is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted aryl or substituted or unsubstituted heteroaryl.
75 . The method of claim 74 , wherein V is a five-membered hetroarylene group.
76 . The method of claim 75 , wherein U is a substituted or unsubstituted five-membered heteroaryl, substituted or unsubstituted phenyl, or substituted or unsubstituted six-membered heteroaryl.
77 . The method of claim 76 , wherein said compound is selected from the group consisting of:
78 . The method of claim 1 , wherein said compound is selected from the group consisting of:
79 . The method of claim 1 , wherein said compound is selected from the group consisting of:
80 . A method of treating a PDGF-R mediated disease, said method comprising administering a therapeutically effective amount of a compound, corresponding to Formula (IA):
wherein:
M is substituted or unsubstituted heteroaryl, or substituted or unsubstituted aryl;
N is a substituted or unsubstituted aryl, or substituted or unsubstituted hetroaryl; and
K is
Y is O or S;
each R k is independently H, halogen, substituted or unsubstituted alkyl, —OH, substituted or unsubstituted alkoxy, —OC(O)R 2 , —NO 2 , —N(R 2 ) 2 , —SR 2 , —C(O)R 2 , —C(O) 2 R 2 , —C(O)N(R 2 ) 2 , or —N(R 2 )C(O)R 2 ,
each R 2 is independently H, substituted or unsubstituted alkyl, substituted or unsubstituted cycloalkyl, substituted or unsubstituted heterocyclyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; or wherein two R 2 groups are linked together by an optionally substituted alkylene; and
each n is independently 0, 1, 2, 3 or 4;
or an active metabolite, or a pharmaceutically acceptable prodrug, isomer, pharmaceutically acceptable salt or solvate thereof.