IP Library Granted Patent US 7,183,544
Granted Patent B2
US 7,183,544 · App. 11/014,225 · Granted Feb 27, 2007

Bi-functional polymer chip

Assignee: Ciphergen Biosystems Inc.
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Quick Facts
Patent No.
US 7,183,544
App. No.
11/014,225
Granted
Feb 27, 2007
Kind
B2
Abstract

In relation to a chromatographic chip, for protein separation, a polymer surface is provided that has a first polymer layer, attached to a support surface, which can be anionic or cationic. To the first layer is attached a second polymer layer, characterized by an opposite charge.

Claims (85)

1. A biochip comprising:

(a) substrate comprising a covalently coupled coating that has ionic groups; and

(b) polymer coating comprising

(1) ionic groups of a charge opposite to the coating, whereby the polymer coating is ionically bound to the substrate coating, and

(2) binding groups,

wherein the biochip is adapted to engage a probe interface of a mass spectrometer and wherein the polymer coating comprises apolysaccharide, a polysaccharide derivative, or dextran.

2. The biochip according to claim 1 , wherein the substrate coating comprises anionic groups and the polymer coating comprises cationic groups.

3. The biochip according to claim 1 , wherein the polymer coating comprises DEAE dextran.

4. The biochip according to claim 2 , wherein the polymer coating comprises cationic groups and hydrophobic groups.

5. The biochip according to claim 4 , wherein the hydrophobic group is selected from an aliphatic, aromatic or heterocyclic group.

6. The biochip according to claim 2 , wherein the polymer coating is attached to the substrate coating via ion exchange by a multipoint interaction mode.

7. The biochip according to claim 1 , wherein the substrate coating comprises cationic groups and the polymer coating comprises anionic groups.

8. The biochip according to claim 1 , wherein the polymer coating comprises a carboxymethyl dextran polymer.

9. The biochip according to claim 7 , wherein the polymer coating comprises an alginic acid polymer or a polyacrylic acid.

10. The biochip according to claim 7 , wherein the polymer coating comprises anionic groups and hydrophobic groups.

11. The biochip according to claim 10 , wherein the hydrophobic group is selected from an aliphatic, aromatic or heterocyclic group.

12. The biochip according to claim 7 , wherein the polymer coating is attached to the substrate coating via ion exchange by a multipoint interaction mode.

13. The biochip according to claim 1 , wherein the polymer coating comprises linear or branched soluble polymers.

14. The biochip according to claim 1 , wherein the functionality of the binding groups is other than that of the ionic groups of the polymer coating.

15. The biochip according to claim 1 , wherein the polymer coating further comprises energy absorbing moieties.

16. The biochip according to claim 1 , wherein the polymer coating comprises a a polysaccharide.

17. The biochip according to claim 1 , wherein the polymer coating comprises a polysaccharide derivative.

18. The biochip according to claim 17 , wherein the synthetic ionic coating polymer is hydrophilic or hydrophobic.

19. The biochip according to claim 1 , wherein the substrate comprises a material selected from metal and synthetic polymer.

20. The biochip according to claim 1 , wherein the binding group of the polymer coating is a functionality selected from an anionic functionality, a cationic functionality, a metal chelate functionality, a hydrophbobic functionality, a hydrophilic functionality, a dye functionality or a biospecific functionality.

21. A method comprising:

(a) providing a biochip of claim 1 ;

(b) depositing an analyte on the polymer coating so that the analyte binds to the binding group;

(c) desorbing/ionizing the analyte from the biochip with photo-irradiation; and

(d) detecting the desorbed/ionized analyte.

22. The method of claim 21 further comprising applying a matrix to the analyte after deposition.

23. The method of claim 22 wherein the photo-irradiation is laser irradiation.

24. The biochip of claim 1 further comprising an analytes bound to the binding groups and a matrix material applied to the surface of the biochip.

25. A kit comprised of:

(a) biochip comprising a substrate that is adapted to engage a probe interface of a mass spectrometer, wherein the substrate has a covalently coupled coating that has ionic groups; and

(b) a receptacle containing a linear polymer that comprises

(1) ionic groups of opposite charge to those on the substrate and

(2) binding groups,

wherein the polymer coating comprises a detran polymer.

26. The kit according to claim 25 , further comprising instructions for coating the biochip with a coating of the polymer so that the polymer coating ionically binds to the substrate coating.

27. The kit according to claim 25 , wherein the biochip has anionic groups and the polymer coating has cationic groups.

28. The kit according to claim 25 , wherein the biochip has cationic groups and the polymer coating has anionic groups.

29. The kit according to claim 25 , further comprising a cross-linking agent.

30. The kit according to claim 25 , wherein the functionality of the binding groups is other than that of the ionic groups of the polymer coating.

31. The kit according to claim 25 , wherein the polymer coating further comprises energy absorbing moieties.

32. The kit according to claim 25 , wherein the polymer coating comprises a dextran polymer.

33. The kit according to claim 25 , wherein the polymer coating comprises a synthetic ionic polymer.

34. The kit according to claim 25 , wherein the substrate comprises a material selected from metal and synthetic polymer.

35. The kit according to claim 25 , wherein the binding group is a functionality selected from an anionic functionality, a cationic functionality, a metal chelate functionality, a hydrophbobic functionality, a hydrophilic functionality, a dye functionality or a biospecific functionality.

36. The kit according to claim 25 , wherein the polymer coating comprises DEAE dextran.

37. The kit according to claim 25 , wherein the polymer coating comprises a carboxymethyl dextran polymer.

38. The kit of claim 25 further comprising (c) a receptacle containing a matrix material for laser desorption/ionization mass spectrometry.

39. A method of making a biochip comprising:

(a) providing a substrate comprising a coating layer of ionic material bound to the substrate; and

(b) contacting the substrate with a linear polymer comprising ionic groups of a charge opposite to those of the ionic material, whereby the linear polymer attaches to the substrate through ionic bonds

wherein the linear polymer comprises a dextran polymer.

40. The method according to claim 39 , wherein the biochip has anionic groups and the polymer coating has cationic groups.

41. The method according to claim 39 , wherein the biochip has cationic groups and the polymer coating has anionic groups.

42. The method according to claim 39 , wherein the linear polymer comprises binding groups for a analyte.

43. The method according to claim 42 , wherein the functionality of the binding groups is other than that of the ionic groups of the polymer coating.

44. The method according to claim 39 , wherein the linear polymer comprises energy absorbing moieties.

45. The method according to claim 39 , wherein the liner polymer comprises a dextran polymer.

46. The method according to claim 39 , wherein the liner polymer comprises a synthetic ionic polymer.

47. The method according to claim 39 , wherein the substrate comprises a material selected from metal and synthetic polymer.

48. The method according to claim 39 , wherein the polymer coating comprises DEAE dextran.

49. The method according to claim 39 , wherein the polymer coating comprises a carboxymethyl dextran polymer.

50. A biochip comprising:

(a) substrate comprising a covalently coupled coating that has ionic groups; and

(b) polymer coating comprising

(1) ionic groups of a charge opposite to the coating, whereby the polymer coating is ionically bound to the substrate coating, and

(2) EAM functionalities,

wherein the biochip is adapted to engage a probe interface of a mass spectrometer and wherein the polymer comprises a dextran polymer.

51. The biochip of claim 50 wherein the polymer coating further comprises binding groups.

52. A method comprising:

(a) providing a biochip of claim 50 ;

(b) depositing an analyte on the polymer coating;

(c) desorbing/ionizing the analyte from the biochip with photo-irradiation; and

(d) detecting the desorbed/ionized analyte.

53. The method of claim 52 wherein the photo-irradiation is laser irradiation.

54. A kit comprised of:

(a) biochip comprising a substrate that is adapted to engage a probe interface of a mass spectrometer, wherein the substrate has a covalently coupled coating that has ionic groups; and

(b) a receptacle containing a linear polymer that comprises

(1) ionic groups of opposite charge to those on the substrate and

(2) EAM functionalities,

wherein the linear polymer comprises a dextran polymer.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Apr 11, 2007
From: CIPHERGEN BIOSYSTEMS, INC.
To: BIO-RAD LABORATORIES, INC.
Reel/Frame 019148/0358 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 27, 2005
From: BOSCHETTI, EGISTO; BOURGEOIS, LUC
To: CIPHERGEN BIOSYSTEMS, INC.
Reel/Frame 016285/0563 →
Continuity (2)
Provisional Application 6053324700 · Dec 31, 2003
Related Publication 20050214815A1 · Sep 29, 2005