IP Library Granted Patent US 7,786,099
Granted Patent B2
US 7,786,099 · App. 11/039,230 · Granted Aug 31, 2010

Aromatic a-ring derivatives of tetracycline compounds

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Quick Facts
Patent No.
US 7,786,099
App. No.
11/039,230
Granted
Aug 31, 2010
Kind
B2
Abstract

Aromatized A-ring derivatives of tetracycline compounds are described.

Claims (77)

1. A tetracycline compound of the formula (I)

wherein

R 1 is hydrogen, alkyl, alkenyl, alkynyl, aryl, arylalkyl, amido, alkylamino, amino, arylamino, alkylcarbonyl, arylcarbonyl, alkylaminocarbonyl, alkoxy, alkoxycarbonyl, alkylcarbonyloxy, alkyloxycarbonyloxy, arylcarbonyloxy, aryloxy, thiol, alkylthio, arylthio, heterocyclic, hydroxyl or halogen;

R 2′ , R 2″ , R 4a and R 4b are each independently hydrogen, alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, arylalkyl, aryl, heterocyclic, heteroaromatic or a prodrug moiety;

R 10 and R 11 are each independently hydrogen, alkyl, aryl, benzyl, arylalkyl or a pro-drug moiety;

R 3′ is hydroxyl, alkoxy, arylalkyloxy, hydrogen or a pro-drug moiety;

R 4 is NR 4a R 4b , alkyl, alkenyl, alkynyl, hydroxyl or halogen;

R 5 and R 5′ are each independently hydroxyl, hydrogen, thiol, alkanoyl, aroyl, alkaroyl, aryl, heteroaromatic, alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, arylalkyl, alkyl carbonyloxy or aryl carbonyloxy;

R 6 and R 6′ are each hydrogen;

R 7 is hydroxyl, substituted alkyl, alkenyl, alkynyl, aryl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, arylalkyl, amino, arylalkenyl, arylalkynyl, acyl, aminoalkyl, heterocyclic, thionitroso or —(CH 2 ) 0-3 NR 7c C(═W′)WR 7a ;

R 8 is hydrogen, hydroxyl, halogen, thiol, nitro, alkyl, alkenyl, alkynyl, aryl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, amino, arylalkenyl, arylalkynyl, acyl, aminoalkyl, heterocyclic, thionitroso or —(CH 2 ) 0-3 NR 8c C(═E′)ER 8a ;

R 9 is hydrogen, hydroxyl, halogen, thiol, nitro, substituted alkyl, alkenyl, alkynyl, aryl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, arylalkyl, amino, arylalkenyl, arylalkynyl, acyl, aminoalkyl, heterocyclic, thionitroso or —(CH 2 ) 0-3 NR 9c C(═Z′)ZR 9a ;

R 7a , R 7b , R 7c , R 7d , R 7e , R 7f , R 8a , R 8b , R 8c , R 8d , R 8e , R 8f , R 9a , R 9b , R 9c , R 9d , R 9e and R 9f are each independently hydrogen, acyl, alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, arylalkyl, aryl, heterocyclic, heteroaromatic or a prodrug moiety;

E is CR 8d R 8e , S, NR 8b or O;

E′ is O, NR 8f or S;

W is CR 7d R 7e , S, NR 7b or O;

W′ is O, NR 7f or S;

X is CR 6′ R 6 ;

Z is CR 9d R 9e , S, NR 9b or O; and

Z′ is O, S or NR 9f ,

and pharmaceutically acceptable salts, esters and enantiomers thereof.

2. The tetracycline compound of claim 1 , wherein R 2′ , R 3′ , R 10 and R 11 are each hydrogen or a prodrug moiety; R 4 is NR 4a R 4b ; R 4a and R 4b are each alkyl; and R 2″ , R 5 and R 5′ are each hydrogen.

3. The tetracycline compound of claim 1 , wherein it R 4 is NR 4a R 4b ; R 4a and R 4b are each alkyl; it R 5 is hydroxyl and R 5′ is hydrogen.

4. The tetracycline compound of claim 1 , wherein it R 4 is NR 4a R 4b ; R 4a and R 4b are each alkyl; R 5 and R 5′ are hydrogen atoms and R 7 is dimethylamino.

5. The tetracycline compound of claim 1 , wherein R 9 is hydrogen.

6. The tetracycline compound of claim 1 , wherein R 9 is substituted or unsubstituted aryl.

7. The tetracycline compound of claim 6 , wherein R 9 is substituted or unsubstituted phenyl.

8. The tetracycline compound of claim 6 , wherein R 9 is substituted or unsubstituted heteroaryl.

9. The tetracycline compound of claim 1 , wherein R 9 is substituted alkyl.

10. The tetracycline compound of claim 9 , wherein R 9 is aminoalkyl.

11. The tetracycline compound of claim 10 , wherein R 9 is aminomethyl.

12. The tetracycline compound of claim 11 , wherein R 9 is alkylaminomethyl.

13. The tetracycline compound of claim 1 , wherein R 9 is substituted or unsubstituted amino.

14. The tetracycline compound of claim 1 , wherein R 9 is nitro or halogen.

15. The tetracycline compound of claim 1 , wherein R 7 is substituted or unsubstituted aryl.

16. The tetracycline compound of claim 1 , wherein R 7 is substituted alkyl.

17. The tetracycline compound of claim 16 , wherein R 7 is aminoalkyl.

18. The tetracycline compound of claim 17 , wherein R 7 is aminomethyl.

19. The tetracycline compound of claim 18 , wherein R 7 is alkylaminomethyl.

20. The tetracycline compound of claim 1 , wherein R 7 is substituted or unsubstituted amino.

21. The tetracycline compound of claim 1 , wherein R 8 is hydrogen.

22. The tetracycline compound of claim 1 , wherein R 3′ is hydrogen, hydroxyl or alkoxy.

23. The tetracycline compound of claim 1 , wherein R 10 is hydrogen, alkyl, aryl or arylalkyl.

24. The tetracycline compound of claim 1 , wherein R 11 is hydrogen, alkyl, aryl or arylalkyl.

25. The tetracycline compound of claim 1 , wherein R 1 is hydrogen, halogen, hydroxyl, thiol, alkoxy or amino.

26. The tetracycline compound of claim 1 , wherein R 1 is alkyl, alkenyl, alkynyl or aryl.

27. The tetracycline compound of claim 1 , wherein said tetracycline compound is:

or

28. A pharmaceutical composition comprising an effective amount of a tetracycline compound and a pharmaceutically acceptable carrier, wherein said tetracycline compound is a compound of claim 1 .

29. A tetracycline compound of the formula (I)

wherein

R 1 is hydrogen, alkyl, alkenyl, alkynyl, aryl, arylalkyl, amido, alkylamino, amino, arylamino, alkylcarbonyl, arylcarbonyl, alkylaminocarbonyl, alkoxy, alkoxycarbonyl, alkylcarbonyloxy, alkyloxycarbonyloxy, arylcarbonyloxy, aryloxy, thiol, alkylthio, arylthio, heterocyclic, hydroxyl or halogen;

R 2′ , R 2″ , R 4a and R 4b are each independently hydrogen, alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, arylalkyl, aryl, heterocyclic, heteroaromatic or a prodrug moiety;

R 10 and R 11 are each independently hydrogen, alkyl, aryl, benzyl, arylalkyl or a pro-drug moiety;

R 3′ is hydroxyl, alkoxy, arylalkyloxy, hydrogen or a pro-drug moiety;

R 4′ alkyl, alkenyl, alkynyl, hydroxyl or halogen;

R 5 and R 5′ are each independently hydroxyl, hydrogen, thiol, alkanoyl, aroyl, alkaroyl, aryl, heteroaromatic, alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, arylalkyl, alkyl carbonyloxy or aryl carbonyloxy;

R 6 and R 6′ are each hydrogen;

R 7 is hydrogen, halogen, thiol or nitro;

R 8 is hydrogen, hydroxyl, halogen, thiol, nitro, alkyl, alkenyl, alkynyl, aryl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, amino, arylalkenyl, arylalkynyl, acyl, aminoalkyl, heterocyclic, thionitroso or —(CH 2 ) 0-3 NR 8c C(═E′)ER 8a ;

R 9 is hydroxyl, substituted alkyl, alkenyl, alkynyl, aryl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, arylalkyl, amino, arylalkenyl, arylalkynyl, acyl, aminoalkyl, heterocyclic, thionitroso or —(CH 2 ) 0-3 NR 9c C(═Z′)ZR 9a ;

R 8a , R 8b , R 8c , R 8d , R 8e , R 8f , R 9a , R 9b , R 9c , R 9d , R 9e , R 9f , are each independently hydrogen, acyl, alkyl, alkenyl, alkynyl, alkoxy, alkylthio, alkylsulfinyl, alkylsulfonyl, alkylamino, arylalkyl, aryl, heterocyclic, heteroaromatic or a prodrug moiety;

E is CR 8d R 8e , S, NR 8b or O;

E′ is O, NR 8f or S;

X is CR 6′ R 6 ;

Z is CR 9d R 9e , S, NR 9b or O;

Z′ is O, S or NR 9f ,

and pharmaceutically acceptable salts, esters and enantiomers thereof.

30. The tetracycline compound of claim 29 , wherein R 2′ , R 3′ , R 10 and R 11 are each hydrogen or a prodrug moiety; R 4 is NR 4a R 4b ; R 4a and R 4b are each alkyl; and R 2″ , R 5 and R 5′ are each hydrogen.

31. The tetracycline compound of claim 29 , wherein R 4 is NR 4a R 4b ; R 4a and R 4b are each alkyl; R 5 is hydroxyl and R 5′ is hydrogen.

32. The tetracycline compound of claim 29 , wherein R 9 is substituted or unsubstituted aryl.

33. The tetracycline compound of claim 32 , wherein R 9 is substituted or unsubstituted phenyl.

34. The tetracycline compound of claim 32 , wherein R 9 is substituted or unsubstituted heteroaryl.

35. The tetracycline compound of claim 29 , wherein R 9 is substituted alkyl.

36. The tetracycline compound of claim 29 , wherein R 9 is substituted or unsubstituted amino.

37. The tetracycline compound of claim 29 , wherein R 7 is hydrogen.

38. The tetracycline compound of claim 29 , wherein R 7 is nitro or halogen.

Assignments (7)
TERMINATION OF LIEN ON PATENTS Recorded Dec 23, 2014
From: MINTZ LEVIN COHN FERRIS GLOVSKY AND POPEO PC
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 034700/0377 →
RELEASE OF SECURITY INTEREST Recorded Oct 31, 2014
From: HBM HEALTHCARE INVESTMENTS (CAYMAN) LTD., AS COLLATERAL AGENT
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 034113/0910 →
SECURITY INTEREST Recorded Mar 14, 2014
From: PARATEK PHARMACEUTICALS, INC.
To: HBM HEALTHCARE INVESTMENTS (CAYMAN) LTD., AS COLLATERAL AGENT
Reel/Frame 032448/0001 →
NOTICE Recorded Mar 8, 2013
From: PARATEK PHARMACEUTICALS, INC.
To: MINTZ LEVIN COHN FERRIS GLOVSKY AND POPEO PC
Reel/Frame 029940/0106 →
RELEASE OF SECURITY INTEREST Recorded Oct 9, 2009
From: MIDCAP FINANCIAL, LLC
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 023348/0621 →
SECURITY AGREEMENT Recorded Jul 6, 2009
From: PARATEK PHARMACEUTICALS, INC.
To: MIDCAP FINANCIAL, LLC
Reel/Frame 022917/0112 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 19, 2005
From: NELSON, MARK L.
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 016815/0605 →