IP Library Granted Patent US 7,642,354
Granted Patent B2
US 7,642,354 · App. 11/105,668 · Granted Jan 5, 2010

Polycyclic pyrazines as potassium ion channel modulators

Assignee: Icagen, Inc.
View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 7,642,354
App. No.
11/105,668
Granted
Jan 5, 2010
Kind
B2
Abstract

The present invention provides a genus of polycyclic pyrazines of formula (I): wherein A and B are independently substituted or unsubstituted 5- or 6- membered heterocycloalkyl, or substituted or unsubstituted 5- or 6- membered heteroaryl, W 1 is W 2 is —CH═, —NH—, —N═, —S—, or —O—; Z 1 is Z 2 is —CH═, —NH—, —N═, —S—, or —O—; Y is a bond, —CH═N—NH—, —NH—CH 2 , or —NR 5 —; s and t are independently integers from 1 to 4; and the substituents R 1 , R 2A , R 2B and R 3 are as defined in the specification for compounds of formula (I). The polycyclic pyrazine compounds are useful as modulators of potassium ion channels in both therapeutic and diagnostic methods.

Claims (112)

1. A compound having a structure according to Formula I:

or a pharmaceutically acceptable salt thereof,

wherein

A is substituted or unsubstituted pyridinyl, substituted or unsubstituted benzopyridinyl;

B is substituted or unsubstituted pyridinyl, substituted or unsubstituted benzopyridinyl;

W 1 is

W 2 is or —N═;

Z 1 is

Z 2 is or —N═;

Y is —NR 5 —;

s and t are independently integers from 1 to 4;

R 2A and R 2B are each independently —H, halogen or —C(O)NH 2 ;

R 1 and R 3 are independently H, —OH, —NH 2 , —NO 2 , —SO 2 NH 2 , —C(O)NH 2 , halogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted 3- to 7- membered cycloalkyl, substituted or unsubstituted 5- to 7- membered heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl; and

R 5 is H, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted 3- to 7- membered cycloalkyl, substituted or unsubstituted 5- to 7- membered heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl;

wherein if s is greater than one, then each R 1 is optionally different;

wherein if t is greater than one, then each R 3 is optionally different;

wherein two R 1 groups are optionally joined together with the atoms to which they are attached to form a substituted or unsubstituted ring;

wherein two R 3 groups are optionally joined together with the atoms to which they are attached to form a substituted or unsubstituted ring;

wherein substituents for the alkyl, heteroalkyl, cycloalkyl, heterocycloalkyl, are selected from the group consisting of —OR′, ═O, ═NR′, ═N—OR′, —NR′R″, —SR′, -halogen, —SiR′R″R′″, —OC(O)R′, —C(O)R′, —CO 2 R′, —CONR′R″, —OC(O)NR′R″, —NR″C(O)R′, —NR′—C(O)NR″R′″, —NR ″C(O) 2 R′, —NR—C (NR′R″R′″)═NR″″, —NR—C(NR′R″)═NR′″, —S(O)R′, —S(O) 2 R′, —S(O) 2 NR′R″, —NRSO 2 R′, —CN and —NO 2 in a number ranging from zero to (2m′+1), where m′ is the total number of carbon atoms in such radical and R′, R″, R′″and R″″are each independently hydrogen, unsubstituted heteroalkyl, unsubstituted aryl, unsubstituted alkyl, alkoxy or thioalkoxy groups, or arylalkyl groups;

wherein substituents for the aryl and heteroaryl groups are selected from the group consisting of halogen, —OR′, —NR′R″, —SR′, -halogen, —SiR′R″R′″, —OC(O)R′, —C(O)R′, —CO 2 R′, —CONR′R″, —OC(O)NR′R″, —NR″C(O)R′, —NR′—C(O)NR″R′″, —NR″C(O) 2 R′, —NR—C(NR′R″R′″)═NR″″, —NR—C(NR′R″)═NR′″, —S(O)R′, —S(O) 2 R′, —S(O) 2 NR′R″, —NRSO 2 R′, —CN, —NO 2 , —R′, —N 3 , —CH(Ph) 2 , fluoro(C 1 -C 4 )alkoxy, and fluoro(C 1 -C 4 )alkyl, in a number ranging from zero to the total number of open valences on the aromatic ring system, and where R′, R″, R″and R″″are independently selected from hydrogen, alkyl, heteroalkyl, aryl and heteroaryl;

wherein the heteroaryl is selected from the group consisting of 1 -pyrrolyl, 2-pyrrolyl, 3-pyrrolyl, 3-pyrazolyl, 2-imidazolyl, 4-imidazolyl, pyrazinyl, 2-oxazolyl, 4-oxazolyl, 2-phenyl-4-oxazolyl, 5-oxazolyl, 3-isoxazolyl, 4-isoxazolyl, 5-isoxazolyl, 2-thiazolyl, 4-thiazolyl, 5-thiazolyl, 2-furyl, 3-furyl, 2-thienyl, 3 -thienyl, 2-pyridinyl, 3-pyridinyl, 4-pyridinyl, 2-pyrimidyl, 4-pyrimidyl, 5-benzothiazolyl, purinyl, 2-benzimidazolyl, 5-indolyl, 1-isoquinolyl, 5-isoquinolyl, 2-quinoxalinyl, 5-quinoxalinyl, 3-quinolyl, and 6-quinolyl; and

wherein the heterocycloalkyl is selected from the group consisting of 1-(1,2,5,6-tetrahydropyridyl), 1 -piperidinyl, 2-piperidinyl, 3-piperidinyl, 4-morpholinyl, 3 -morpholinyl, tetrahvdrofuran-2-yl, tetrahydrofuran-3-yl, tetrahydrothien-2-yl tetrahydrothien-3-yl, 1-piperazinyl, 2-piperazinyl, 1 -pyrrolidinyl and pyrrolidin-1-yl-2-one.

2. The compound of claim 1 , wherein

R 2A and R 2B are each independently —H, halogen or —C(O)NH 2 ; and

R 1 and R 3 are independently H, —OH, —NH 2 , —NO 2 , halogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted 5- to 7- membered heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.

3. The compound of claim 2 , wherein

R 1 is H, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, or substituted or unsubstituted 5- to 7-membered heterocycloalkyl;

R 2A and R 2B are independently H, halogen, or —C(O)NH 2 ; and

R 3 is H, —NH 2 , —NO 2 , halogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted 5- to 7-membered heterocycloalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.

4. The compound of claim 3 , wherein

R 1 is H, —OCH 3 , methyl, unsubstituted pyrrolidine, or dimethylamino;

R 2A and R 2B are independently H, halogen, or —C(═O)—NH 2 ; and

R 3 is H, —NH 2 , —NO 2 , Cl, F, I, —OCH 3 , unsubstituted phenyl, flurophenyl, methyl, unsubstituted pyridinyl, unsubstituted thiophenyl, unsubstituted furanyl, unsubstituted pyrrolidinonyl, n—methyl piperizine, unsubstituted piperidinyl, or unsubstituted morpholinyl.

5. The compound of claim 1 , wherein

R 2A and R 2B are H;

A is

Y is —NH—;

B is

s and t are 1; and

R 1 and R 3 are independently H, halogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.

6. The compound of claim 1 , wherein

R 2A and R 2B are H;

A is substituted or unsubstituted pyridyl;

Y is —NH—;

B is

t is 1; and

R 1 and R 3 are independently H, halogen, substituted or unsubstituted alkyl, substituted or unsubstituted heteroalkyl, substituted or unsubstituted aryl, or substituted or unsubstituted heteroaryl.

7. The compound of claim 6 , wherein B is

wherein

R 3 is H,

8. The compound of claim 6 , wherein B is

wherein

R 3 is methyl.

9. The compound of claim 5 , wherein A is

wherein

R 1 is methyl or

B is

wherein R 3 is H, F, or methyl.

10. The compound of claim 5 , wherein

11. A pharmaceutical composition comprising a pharmaceutically acceptable carrier and the compound claim 1 .

12. The compound of claim 1 , having the formula:

13. A pharmaceutical composition comprising a pharmaceutically acceptable carrier and the compound claim 12 .

14. A compound of claim 1 , wherein the compound is selected from the group consisting of:

(4-Methyl-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

1-[6-(6-Pyridin-2-yl-2-ylamino)-pyridin-3-yl]-pyrrolidin-2one,

(6-Pyridin-2-yl-pyrazin-2-yl)-(5-pyrrolidin-1-yl-pyridin-2yl)-amine,

Pyridin-2-yl-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(5-Morpholin-4-yl-pyridin-2-yl)-(6-pyridin-2-yl- pyrazin-2-yl)-amine,

(6-Pyridin-2-yl-pyrazin-2-yl)-(3,4,5,6-tetrahydro-2H-[1,3 ′]bipyridinyl-6′-yl)-amine,

N 5 -(2-Methoxy-ethyl-N 5 -methyl-N 2 -(6-pyridin-2-pyrazin-2-yl)-pyridine-2,5-diamine,

[6-(6-Methoxy-pyridin-2-yl)-pyrazin-2-yl)]-pyridin-2-yl-amine,

Pyridin-2-yl-[6-(4-pyrrolidin-1-yl-pyridin-2-yl)-pyrazin-2-yl)]-amine,

(5-Fluoro-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(5-Chloro-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(5-Phenyl-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(4-Methyl-pyridin-2-yl)-[6-(4-pyrrolidin-1-yl-pyridin-2-yl)-pyrazin-2-yl]-amine,

[6-(4-Methyl-pyridin-2-yl)-pyrazin-2-yl]-pyridin-2-yl-amine,

(5-Fluoro-pyridin-2-yl)-[6(4-methyl-pyridin-2-yl)-pyrazin-2-yl]-amine,

[6-(5-Methyl-pyridin-2-yl)-pyrazin-2-yl]-pyridin-2-yl-amine,

N 2 -(6-Pyridin-2-yl-pyrazin-2-yl)-pyridine-2,5-diamine,

[3,3′]Bipyridinyl-6-yl-(6-pyridin-2-yl-2-yl)-amine,

[5-(3-Fluoro-phenyl)-pyridin-2-yl]-(6pyridin-2-yl-pyrazin-2-yl)-amine,

[5-(2-Methoxy-phenyl)-pyridin-2-yl]-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(4-Methyl-3,4,5,6-tetrahydro-2H-[1,3′]bipyridinyl-6′-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(5 Bromo-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2yl)-amine, [5-(4-Dimethylamino-phenyl)-pyridin-2-yl]-(6-pyridin-2yl-pyrazin-2-yl)-amine,

(5-Chloro-pyridin-2-yl)-[6-(4pyrrolidin-1-yl-pyridin-2-yl)-pyrazin-2-yl]-amine,

(6-Fluoro-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

[5-(4-Methyl-piperazin-1-yl)-pyridin-2-yl]-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(5-Fluoro-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(3-Bromo-6-pyridin-2-yl-pyrazin-2-yl)-pyridin-2-yl-amine,

2,6-Bis-(methoxy-pyridin-2-yl)-pyrazine,

(5-Chloro-pyridin-2-yl)-[6-(6-methoxy-pyridin-2-yl)-pyrazin-2-yl]-amine,

(5-Fluoro-pyridin-2-yl)-[6-(4-pyrrolidin-1-yl-pyridin-2-yl)-pyrazin-2-yl]-amine,

(5-Phenyl-pyridin-2-[6-(4-pyrrolidin-1-yl-pyridin-2-yl)-pyrazin-2-yl]-amine,

(5-Nitro-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(5-Fluoro-pyridin-2-yl)-[6-(5-methyl-pyridin-2-yl)-pyrazin-2-yl]-amine,

N,N-Diethyl-6-(6-pyridin-2-yl-pyrazin-2-ylamino)-nicotinamide,

(6-Pyridin-2-yl-pyrazin-2-yl)-pyrimidin-2-yl-amine,

(6-Benzo[b]thiophen-2-yl-pyrazin-2-yl)-pyridin-2-yl-amine,

(3-Benzyloxy-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine

5-Pyridin-2-yl-3-(pyridin-2-ylamino)-pyrazine-2carboxylic acid amide,

(5-Bromo-pyridin-2-yl)-(5-bromo-6-pyridin-2-yl-pyrazin-2-yl)-amine,

(1-Oxy-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(3-Pentyloxy-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin2-yl)-amine,

6-(6-Pyridin-2-yl-pyrazin-2-ylamino)-nicotinamide,

4-Methyl-1-[6-(6-pyridin-2-yl-pyrazin-2-ylamino)-pyridin-3-yl]-piperazin-2-one,

2-(6-Pyridin-2-yl-pyrazin-2-ylamino)-pyridin-3-ol,

(3-Chloro-5-trifluoromethyl-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2yl)-amine,

(4-Methyl-3-nitro-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine,

(3-Benzyloxy-pyridin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine and

(4,6-Dimethoxy-pyrimidin-2-yl)-(6-pyridin-2-yl-pyrazin-2-yl)-amine.

15. A pharmaceutical composition comprising a pharmaceutically acceptable carrier and a compound of claim 14 .

Assignments (3)
MERGER & CHANGE OF NAME Recorded Dec 13, 2005
From: YAMANOUCHI PHARMACEUTICAL CO., LTD.
To: ASTELLAS PHARMA INC.
Reel/Frame 017083/0008 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 5, 2005
From: SUZUKI, TAKESHI; ISHII, TAKAHIRO; MORITOMO, AYAKO
To: ASTELLAS PHARMA INC.
Reel/Frame 016474/0192 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 5, 2005
From: WANG, XIADONG; SPEAR, KERRY LEIGH; FULP, ALAN BRADLEY; SECONI, DARRICK
To: ICAGEN, INC.
Reel/Frame 016475/0970 →
Continuity (2)
Provisional Application 6056214900 · Apr 13, 2004
Related Publication 20050239800A1 · Oct 27, 2005