Releasable polymeric conjugates based on aliphatic biodegradable linkers
View Patent ↗Activated polymeric bicine derivatives such as as well as conjugates made therewith are disclosed. Methods of making and using the bicine derivatives are also disclosed.
1. A compound comprising the formula:
wherein:
R 1 and R 2 are independently selected from the group consisting of polyethylene glycol, C 1-6 alkyls, aralkyls, and terminal branching groups;
Y 1-3 are independently O, S or NR 11 ;
L 1 and L 2 are independently selected bifunctional linkers;
Z is selected from the group consisting of
wherein L 3 is a bifunctional linker and Y 4 is O, S or NR 11 , hydrophobic moieties, bifunctional linking moieties and combinations thereof;
R 3 -R 11 , R 24 and R 25 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
A is an organic compound containing an amine;
a and c are each independently 0 or a positive integer;
b, d and e are independently 0 or 1; and
m, n, o, and p are independently selected positive integers,
provided that at least one of R 1 and R 2 is a polyethylene glycol and the weight average molecular weight thereof is about 40,000 Da.
2. The compound of claim 1 , wherein A is selected from the group consisting of cardiovascular agents, anti-neoplastic agents, anti-infective agents, anti-fungal agents, anti-anxiety agents, gastrointestinal agents, central nervous system-activating agents, analgesic agents, fertility agents, contraceptive agents, anti-inflammatory agents, and steroidal agents.
3. The compound of claim 1 , wherein R 1 is a polyethylene glycol; R 2 is C 1-6 alkyl; and both c and d are zero.
4. The compound of claim 1 , wherein R 3 -R 10 , R 24 and R 25 are each hydrogen.
5. The compound of claim 1 , wherein a, b, c, d, m, n, o and p are each 1 and e is 0 or 1.
6. The compound of claim 1 , wherein R 1 comprises a polyalkylene oxide.
7. The compound of claim 1 , wherein R 2 comprises a polyalkylene oxide.
8. The compound of claim 1 , wherein R 1 comprises a polyethylene glycol.
9. The compound of claim 1 , wherein R 2 comprises a polyethylene glycol.
10. The compound of claim 1 , wherein R 1 or R 2 further include a capping group J, selected from the group consisting of OH, NH 2 , SH, CO 2 H, C 1-6 alkyl moieties,
11. A compound of claim 10 , selected from the group consisting of:
wherein L 3 is a bifunctional linker and Y 4 is O, S or NR 11 .
12. The compound of claim 1 , wherein R 1 is selected from the group consisting of:
J-O—(CH 2 CH 2 O) x —,
J-O—(CH 2 CH 2 O) x —CH 2 C(O)—O—,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 NR 12 —,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 S—,
—OC(O)CH 2 —O—(CH 2 CH 2 O) X —CH 2 C(O)—O—,
—NR 12 CH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 NR 12 — and
—SCH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 S—
wherein:
x is the degree of polymerization;
R 12 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy; and
J is a capping group.
13. The compound of claim 1 , wherein R 1 and R 2 are individually selected from the group consisting of:
CH 3 —O—(CH 2 CH 2 O) x —,
CH 3 —O—(CH 2 CH 2 O) x —CH 2 C(O)—O—,
CH 3 —O—(CH 2 CH 2 O) x —CH 2 CH 2 NH— and
CH 3 —O—(CH 2 CH 2 O) x —CH 2 CH 2 S—
wherein x is the degree of polymerization.
14. The compound of claim 1 , wherein R 2 is selected from the group consisting of:
J-O—(CH 2 CH 2 O) x —,
J-O—(CH 2 CH 2 O) x —CH 2 C(O)—O—,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 NR 13 —,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 S—,
—OC(O)CH 2 —O—(CH 2 CH 2 O) X —CH 2 C(O)—O—,
—NR 13 CH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 NR 13 — and
—SCH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 S—,
wherein:
x is the degree of polymerization;
R 13 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy; and
J is a capping group.
15. The compound of claim 1 , wherein R 1 and R 2 each comprise a polymer residue of the formula —O—(CH 2 CH 2 O) x and x is the degree of polymerization.
16. The compound of claim 15 , wherein R 1 and R 2 each have a weight average molecular weight of from about 2,000 Da to about 25,000 Da.
17. The compound of claim 1 , wherein L 1 is selected from the group consisting of:
—NH(CH 2 CH 2 O) 2 CH 2 C(O)—,
—NH(CH 2 ) 3 OC(O)—,
—(CH 2 ) t C(O)—,
—C(O)NH(CH 2 ) t C(O)—,
—NH(CH 2 ) t C(O)—,
—NR 19 (CH 2 ) t (CH 2 CH 2 O) q NHC(O)—,
—(CH 2 CH 2 O) t NHC(O)—,
—O(CR 14 R 15 ) t NHC(O)—,
—NR 19 (CR 14 R 15 ) q C(O)NH(CR 16 R 17 ) t C(O)—,
—O(CH 2 ) t OC(O)—,
—NR 19 (CR 14 R 15 ) t C(O)—,
—NR 19 (CH 2 CH 2 O) t —OC(O)—,
—O(CR 14 R 15 ) t OC(O)—,
wherein
R 14 -R 17 and R 19 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
R 18 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy, NO 2 , haloalkyl and halogen; and
t and q are individually selected positive integers.
18. The compound of claim 1 , wherein L 2 is selected from the group consisting of:
—NH(CH 2 CH 2 O) 2 CH 2 C(O)—,
—NH(CH 2 ) 3 OC(O)—,
—(CH 2 ) v C(O)—,
—C(O)(CH 2 ) v NHC(O)—,
—NH(CH 2 ) v C(O)—,
—NR 25 (CH 2 ) v (CH 2 CH 2 O) w NHC(O)—,
—(CH 2 CH 2 O) v NHC(O)—,
—O(CR 20 R 21 ) v NHC(O)—,
—NR 25 (CR 20 R 21 ) w (O)CNH(CR 22 R 23 ) v C(O)—,
—O(CH 2 ) v OC(O)—,
—NR 25 (CR 20 R 21 ) v C(O)—,
—NR 25 (CH 2 CH 2 O) v —OC(O)—,
—O(CR 20 R 21 ) v OC(O)—,
wherein
R 20 -R 23 and R 25 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
R 24 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy, C 1-6 heteroalkoxy, NO 2 , haloalkyl and halogen; and
v and w are individually selected positive integers.
19. The compound of claim 1 , wherein said terminal branching group comprises the formula:
wherein:
Y 5 is O, S or NR 46 ;
L 4 is a bifunctional linker;
R 40 -R 46 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
j and k are each independently 0 or a positive integer;
q is 0 or 1;
g, h, v and w are independently selected positive integers;
R 50 is selected from the group consisting of substantially non-antigenic polymer residues, C 1-6 alkyls, C 1-6 aralkyls, and
wherein:
L 5 is a bifunctional linker; and
R 60 is selected from the group consisting of substantially non-antigenic polymer residues, C 1-6 alkyls and C 1-6 aralkyls.
20. A compound of claim 19 , comprising the structure:
21. A compound of claim 19 , comprising the structure:
22. The compound of claim 1 , wherein R 3 -R 10 , R 24 and R 25 are each hydrogen; Y 1 is oxygen; and R 1 is a polyethylene glycol.
23. The compound of claim 22 , wherein a, b, c, d, m, n, o and p are each 1; and e is 0 or 1.
24. A method of treatment of a condition that is treatable by a moiety A of claim 2 , comprising administering to a mammal in need thereof, an effective amount of a compound of claim 4 , wherein R 1 is a polyethylene glycol.
25. A compound comprising the formula:
wherein:
R 1 and R 2 are independently selected from the group consisting of substantially non-antigenic polymer residues, C 1-6 alkyls, aralkyls, and terminal branching groups;
Y 1-3 are independently O, S or NR 11 ;
L 1 and L 2 are independently selected bifunctional linkers;
Z is selected from the group consisting of
wherein L 3 is a bifunctional linker and Y 4 is O, S or NR 11 , hydrophobic moieties, bifunctional linking moieties and combinations thereof;
R 3 -R 11 , R 24 and R 25 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
A is selected from the group consisting of proteins, and enzymes;
a and c are each independently 0 or a positive integer;
b, d and e are independently 0 or 1; and
m, n, o, and p are independently selected positive integers,
provided that at least one of R 1 and R 2 is a substantially non-antigenic polymer.
26. The compound of claim 25 , wherein A is selected from the group consisting of cardiovascular agents, anti-neoplastic agents, anti-infective agents, anti-fungal agents, anti-anxiety agents, gastrointestinal agents, central nervous system-activating agents, analgesic agents, fertility agents, contraceptive agents and anti-inflammatory agents.
27. The compound of claim 25 , wherein R 3 -R 10 , R 24 and R 25 are each hydrogen.
28. The compound of claim 25 , wherein a, b, c, d, m, n, o and p are each 1 and e is 0 or 1.
29. The compound of claim 25 , wherein R 1 comprises a polyalkylene oxide.
30. The compound of claim 25 , wherein R 2 comprises a polyalkylene oxide.
31. The compound of claim 25 , wherein R 1 comprises a polyethylene glycol.
32. The compound of claim 25 , wherein R 2 comprises a polyethylene glycol.
33. The compound of claim 25 , wherein R 1 or R 2 further include a capping group J, selected from the group consisting of OH, NH 2 , SH, CO 2 H, C 1-6 alkyl moieties,
34. A compound of claim 33 , selected from the group consisting of:
wherein L 3 is a bifunctional linker and Y 4 is O, S or NR 11 .
35. The compound of claim 25 , wherein R 1 is selected from the group consisting of:
J-O—(CH 2 CH 2 O) x —,
J-O—(CH 2 CH 2 O) x —CH 2 C(O)—O—,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 NR 12 —,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 S—,
—OC(O)CH 2 —O—(CH 2 CH 2 O) X —CH 2 C(O)—O—,
—NR 12 CH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 NR 12 — and
—SCH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 S—
wherein:
x is the degree of polymerization;
R 12 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy; and
J is a capping group.
36. The compound of claim 25 , wherein R 1 and R 2 are individually selected from the group consisting of:
CH 3 —O—(CH 2 CH 2 O) x —,
CH 3 —O—(CH 2 CH 2 O) x —CH 2 C(O)—O—,
CH 3 —O—(CH 2 CH 2 O) x —CH 2 CH 2 NH— and
CH 3 —O—(CH 2 CH 2 O) x —CH 2 CH 2 S—
wherein x is the degree of polymerization.
37. The compound of claim 35 , wherein R 2 is selected from the group consisting of:
J-O—(CH 2 CH 2 O) x —,
J-O—(CH 2 CH 2 O) x —CH 2 C(O)—O—,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 NR 13 —,
J-O—(CH 2 CH 2 O) x —CH 2 CH 2 S—,
—OC(O)CH 2 —O—(CH 2 CH 2 O) X —CH 2 C(O)—O—,
—NR 13 CH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 NR 13 — and
—SCH 2 CH 2 —O—(CH 2 CH 2 O) X —CH 2 CH 2 S—,
wherein:
x is the degree of polymerization;
R 13 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy; and
J is a capping group.
38. The compound of claim 25 , wherein R 1 and R 2 each comprise a polymer residue of the formula —O—(CH 2 CH 2 O) x and x is the degree of polymerization.
39. The compound of claim 30 , wherein R 1 and R 2 each have a weight average molecular weight of from about 2,000 Da to about 25,000 Da.
40. The compound of claim 25 , wherein L 1 is selected from the group consisting of:
—NH(CH 2 CH 2 O) 2 CH 2 C(O)—,
—NH(CH 2 ) 3 OC(O)—,
—(CH 2 ) t C(O)—,
—C(O)NH(CH 2 ) t C(O)—,
—NH(CH 2 ) t C(O)—,
—NR 19 (CH 2 ) t (CH 2 CH 2 O) q NHC(O)—,
—(CH 2 CH 2 O) t NHC(O)—,
—O(CR 14 R 15 ) t NHC(O)—,
—NR 19 (CR 14 R 15 ) q C(O)NH(CR 16 R 17 ) t C(O)—,
—O(CH 2 ) t OC(O)—,
—NR 19 (CR 14 R 15 ) t C(O)—,
—NR 19 (CH 2 CH 2 O) t —OC(O)—,
—O(CR 14 R 15 ) t OC(O)—,
wherein
R 14 -R 17 and R 19 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
R 18 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy, NO 2 , haloalkyl and halogen; and
t and q are individually selected positive integers.
41. The compound of claim 25 , wherein L 2 is selected from the group consisting of:
—NH(CH 2 CH 2 O) 2 CH 2 C(O)—,
—NH(CH 2 ) 3 OC(O)—,
—(CH 2 ) v C(O)—,
—C(O)(CH 2 ) v NHC(O)—,
—NH(CH 2 ) v C(O)—,
—NR 25 (CH 2 ) v (CH 2 CH 2 O) w NHC(O)—,
—(CH 2 CH 2 O) v NHC(O)—,
—O(CR 20 R 21 ) v NHC(O)—,
—NR 25 (CR 20 R 21 ) w (O)CNH(CR 22 R 23 ) v C(O)—,
—O(CH 2 ) v OC(O)—,
—NR 25 (CR 20 R 21 ) v C(O)—,
—NR 25 (CH 2 CH 2 O) v —OC(O)—,
—O(CR 20 R 21 ) v OC(O)—,
wherein
R 20 -R 23 and R 25 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
R 24 is selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy, C 1-6 heteroalkoxy, NO 2 , haloalkyl and halogen; and
v and w are individually selected positive integers.
42. The compound of claim 25 , wherein said terminal branching group comprises the formula:
wherein:
Y 5 is O, S or NR 46 ;
L 4 is a bifunctional linker;
R 40 -R 46 are independently selected from the group consisting of hydrogen, C 1-6 alkyls, C 3-19 branched alkyls, C 3-8 cycloalkyls, C 1-6 substituted alkyls, C 3-8 substituted cycloalkyls, aryls, substituted aryls, aralkyls, C 1-6 heteroalkyls, substituted C 1-6 heteroalkyls, C 1-6 alkoxy, phenoxy and C 1-6 heteroalkoxy;
j and k are each independently 0 or a positive integer;
q is 0 or 1;
g, h, v and w are independently selected positive integers;
R 50 is selected from the group consisting of substantially non-antigenic polymer residues, C 1-6 alkyls, C 1-6 aralkyls, and
wherein:
L 5 is a bifunctional linker; and
R 60 is selected from the group consisting of substantially non-antigenic polymer residues, C 1-6 alkyls and C 1-6 aralkyls.
43. A compound of claim 42 , comprising the structure:
44. A compound of claim 42 , comprising the structure: