IP Library Granted Patent US 7,666,855
Granted Patent B2
US 7,666,855 · App. 11/589,363 · Granted Feb 23, 2010

2′-C-methyl nucleoside derivatives

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Quick Facts
Patent No.
US 7,666,855
App. No.
11/589,363
Granted
Feb 23, 2010
Kind
B2
Abstract

Compounds of Formula I, stereoisomers, and pharmaceutically acceptable salts or prodrugs thereof, their preparation, and their uses for the treatment of hepatitis C viral infection are described:

Claims (71)

1. A compound of Formula II:

wherein:

B is selected from the group consisting of

V is selected from the group consisting of optionally substituted monocyclic aryl and unsubstituted or substituted monocyclic heteroaryl wherein said substituted monocyclic aryl and said substituted monocyclic heteroaryl are substituted with 1-6 substituents selected from the group consisting of lower alkyl, lower alkoxy, lower perhaloalkyl, halogen, hydroxy, cyano, amino, —OR 3 , —OR 12 , —COR 3 , —CO 2 R 3 , —NR 3 2 , —NR 12 2 , —CO 2 NR 2 2 , —SR 3 , —SO 2 R 3 , and —SO 2 NR 2 2 ;

W and W′ are independently selected from the group consisting of —H, methyl, and V, or W and W′ are each methyl, with the proviso that when W is V, then W′ is H;

Z is selected from the group consisting of —H, —OMe, —OEt, phenyl, C 1 -C 3 alkyl, —NR 4 2 , —SR 4 , —(CH 2 ) p —OR 6 , —(CH 2 ) p —SR 6 and —OCOR 5 ; or

together V and Z are connected via an additional 3-5 atoms to form a cyclic group, containing 0-1 heteroatom, that is fused to an aryl group at the beta and gamma position to the O attached to the phosphorus; or

together Z and W are connected via an additional 3-5 atoms to form a cyclic group, containing 0-1 heteroatom; or

together W and W′ are connected via an additional 2-5 atoms to form a cyclic group;

R 2 is selected from the group consisting of R 3 and hydrogen;

R 3 is selected from the group consisting of alkyl, aryl, heterocycloalkyl, and aralkyl;

R 4 is C 1 -C 4 alkyl;

R 5 is selected from the group consisting of C 1 -C 4 alkyl, monocyclic aryl, and monocyclic aralkyl; and

R 6 is C 1 -C 4 acyl; and

together R 7 and R 8 form a cyclic carbonate; and

R 10 is selected from the group consisting of OR 4 , OR 6 , NH 2 , NHR 4 , halogen, and H;

or a pharmaceutically acceptable salt thereof.

2. The compound of claim 1 , wherein:

V is selected from the group consisting of phenyl, substituted phenyl with 1-3 substituents independently selected from the group consisting of halogen, C 1 -C 6 alkyl, —CF 3 , —OR 3 , —OR 12 , —COR 3 , —CO 2 R 3 , —NR 3 2 , —NR 12 2 , —CO 2 NR 2 2 , —SR 3 , —SO 2 R 3 , —SO 2 NR 2 2 and —CN, monocyclic heteroaryl, and substituted monocyclic heteroaryl with 1-2 substituents independently selected from the group consisting of halogen, C 1 -C 6 alkyl, —CF 3 , —OR 3 , —OR 12 , —COR 3 , —CO 2 R 3 , —NR 3 2 , —NR 12 2 , —CO 2 NR 2 2 , —SR 3 , —SO 2 R 3 , —SO 2 NR 2 2 and —CN, and wherein said monocyclic heteroaryl and substituted monocyclic heteroaryl has 1-2 heteroatoms that are independently selected from the group consisting of N, O, and S with the provisos that

a) when there are two heteroatoms and one is O, then the other can not be O or S, and

b) when there are two heteroatoms and one is S, then the other can not be O or S; or

together V and Z are connected via an additional 3-5 atoms to form a cyclic group, containing 0-1 heteroatom, that is fused to an aryl group at the beta and gamma position to the O attached to the phosphorus; and

R 3 is C 1 -C 6 alkyl.

3. The compound of claim 2 wherein:

V is selected from the group consisting of phenyl, substituted phenyl with 1-3 substituents independently selected from the group consisting of —Cl, —Br, —F, C 1 -C 3 alkyl, —CF 3 , —COCH 3 , —OMe, —NMe 2 , —OEt, —CO 2 t-butyl, —CO 2 NH 2 , —SMe, —SO 2 Me, —SO 2 NH 2 and —CN, monocyclic heteroaryl, and substituted monocyclic heteroaryl with 1-2 substituents independently selected from the group consisting of —Cl, —Br, —F, C 1 -C 3 alkyl, —CF 3 , —COCH 3 , —OMe, —NMe 2 , —OEt, —CO 2 t-butyl, —CO 2 NH 2 , —SMe, —SO 2 Me, —SO 2 NH 2 and —CN and wherein said monocyclic heteroaryl and substituted monocyclic heteroaryl has 1-2 heteroatoms that are independently selected from the group consisting of N, O, and S with the provisos that

a) when there are two heteroatoms and one is O, then the other can not be O or S, and

b) when there are two heteroatoms and one is S, then the other can not be O or S; or

together V and Z are connected via an additional 4 atoms to form a 6-membered ring that is fused to a phenyl or substituted phenyl at the beta and gamma position to the O attached to the phosphorus, wherein said substituted phenyl is substituted with 1-6 substituents selected from the group consisting of lower alkyl, lower alkoxy, lower perhaloalkyl, halogen, hydroxy, cyano, amino, —OR 3 , —OR 12 , —COR 3 , —CO 2 R 3 , —NR 3 2 , —NR 12 2 , —CO 2 NR 2 2 , —SR 3 , —SO 2 R 3 , and —SO 2 NR 2 2 .

4. The compound of claim 1 wherein V is selected from the group consisting of phenyl; substituted phenyl with 1-2 substituents independently selected from the group consisting of —Cl, —Br, —F, C 1 -C 3 alkyl, and —CF 3 ; pyridyl; substituted pyridyl with 1 substituent independently selected from the group consisting of —Cl, —Br, —F, C 1 -C 3 alkyl, and

—CF 3 ; furanyl; substituted furanyl with 1 substituent independently selected from the group consisting of —Cl, —Br, —F, C 1 -C 3 alkyl, and —CF 3 ; thienyl; and substituted thienyl with 1 substituent independently selected from the group consisting of —Cl, —Br, —F, C 1 -C 3 alkyl, and —CF 3 ;

and wherein Z, W, and W′ are each —H.

5. The compound of claim 4 wherein V is selected from the group consisting of phenyl, 3-chlorophenyl, 3-bromophenyl, 2-bromophenyl, 3,5-dichlorophenyl, 3-bromo-4-fluorophenyl, 2-pyridyl, 3-pyridyl, and 4-pyridyl.

6. The compound of claim 5 wherein V is selected from the group consisting of 3-chlorophenyl, 3-bromophenyl, 2-bromophenyl, 3,5-dichlorophenyl, 3-pyridyl, and 4-pyridyl.

7. The compound of claim 1 , wherein said compound is a compound of Formula III:

wherein:

V and the 5′oxymethylene group of the ribose sugar moiety are cis to one another and wherein V is selected from the group consisting of 3-chlorophenyl, 3-bromophenyl, 2-bromophenyl, 3,5-dichlorophenyl, 3-pyridyl, and 4-pyridyl.

8. The compound of claim 7 , wherein said compound has R-stereochemistry at the V-attached carbon and has S-stereochemistry at the phosphorus center.

9. The compound of claim 7 wherein said compound has S-stereochemistry at the V-attached carbon and has R-stereochemistry at the phosphorus center.

10. A compound of Formula I:

wherein:

B is

V is phenyl optionally substituted by one or two halogen atoms, or V is pyridyl;

and W, W′ and Z are all —H;

or a pharmaceutically acceptable salt thereof.

11. The compound of claim 10 , wherein V is selected from the group consisting of phenyl, 3-chlorophenyl, 3-bromophenyl, 2-bromophenyl, 3,5-dichlorophenyl, 3-bromo-4-fluorophenyl, 2-pyridyl, 3-pyridyl, and 4-pyridyl.

12. The compound of claim 11 , wherein V is selected from the group consisting of 3-chlorophenyl, 3-bromophenyl, 2-bromophenyl, 3,5-dichlorophenyl, and 4-pyridyl.

13. The compound of claim 12 , wherein V and the 5′oxymethylene group of the ribose sugar moiety are cis to one another.

14. The compound of claim 13 , wherein said compound has R-stereochemistry at the V-attached carbon and has S-stereochemistry at the phosphorus center.

15. The compound of claim 13 , wherein said compound has S-stereochemistry at the V-attached carbon and has R-stereochemistry at the phosphorus center.

16. The compound of claim 10 wherein said compound is:

17. The compound of claim 10 , wherein said compound is:

18. A pharmaceutical composition comprising a pharmaceutically effective amount of a compound of claim 1 and a pharmaceutically acceptable carrier.

19. A pharmaceutical composition comprising a pharmaceutically effective amount of a compound of claim 10 and a pharmaceutically acceptable carrier.

20. A method of inhibiting viral replication in a human patient comprising administering to said human patient a therapeutically effective amount of a compound of claim 1 .

21. The method of claim 20 , wherein said viral replication is RNA-dependent RNA viral replication.

22. The method of claim 20 , wherein said viral replication is HCV replication.

23. A method of inhibiting viral replication in a human patient comprising administering to said human patient a therapeutically effective amount of a compound of claim 10 .

24. The method of claim 23 , wherein said viral replication is RNA-dependent RNA viral replication.

25. The method of claim 23 , wherein said viral replication is HCV replication.

26. A method of treating a viral infection in a human patient comprising administering to said human patient a therapeutically effective amount of a compound of claim 1 .

27. The method of claim 26 , wherein said viral infection is RNA-dependent RNA viral infection.

28. The method of claim 26 , wherein said viral infection is HCV infection.

29. The method of claim 26 , wherein said compound is used in combination with a therapeutically effective amount of a second agent active against HCV.

30. The method of claim 29 , wherein said second agent active against HCV is ribavirin; levovirin; viramidine; thymosin alpha-1; interferon-β; an inhibitor of NS3 serine protease; an inhibitor of inosine monophosphate dehydrogenase; interferon-α or pegylated interferon-α, alone or in combination with ribavirin or levovirin.

31. The method of claim 30 , wherein said second agent active against HCV is interferon-α or pegylated interferon-α, alone or in combination with ribavirin or levovirin.

32. A method of treating a viral infection in a human patient comprising administering to said human patient a therapeutically effective amount of a compound of claim 10 .

33. The method of claim 32 , wherein said viral infection is RNA-dependent RNA viral infection.

34. The method of claim 32 , wherein said viral infection is HCV infection.

35. The method of claim 34 , wherein said compound of Formula I is used in combination with a therapeutically effective amount of a second agent active against HCV.

36. The method of claim 35 , wherein said second agent active against HCV is ribavirin; levovirin; viramidine; thymosin alpha-1; interferon-β; an inhibitor of NS3 serine protease; an inhibitor of inosine monophosphate dehydrogenase; interferon-α or pegylated interferon-α, alone or in combination with ribavirin or levovirin.

37. The method of claim 36 , wherein said second agent active against HCV is interferon-α or pegylated interferon-α, alone or in combination with ribavirin or levovirin.

Assignments (2)
SECURITY INTEREST Recorded Oct 18, 2023
From: CYDEX PHARMACEUTICALS, INC.; LIGAND PHARMACEUTICALS INCORPORATED; METABASIS THERAPEUTICS, INC.; PFENEX INC.
To: CITIBANK, N.A., AS ADMINISTRATIVE AGENT
Reel/Frame 065271/0025 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Feb 9, 2007
From: REDDY, K. RAJA; ERION, MARK D.
To: METABASIS THERAPEUTICS, INC.
Reel/Frame 018872/0638 →