IP Library Granted Patent US 8,288,352
Granted Patent B2
US 8,288,352 · App. 11/667,437 · Granted Oct 16, 2012

Auristatins having an aminobenzoic acid unit at the N terminus

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Quick Facts
Patent No.
US 8,288,352
App. No.
11/667,437
Granted
Oct 16, 2012
Kind
B2
Abstract

Auristatin-type peptides are disclosed which are highly cytotoxic, synthetically accessible, and can be conjugated to antibodies and other ligands.

Claims (116)

1. A Conjugate Compound having the Formula Ia:

or a pharmaceutically acceptable salt thereof;

wherein:

L- is a Ligand Unit;

-A a -W w — is a Linker Unit (LU), wherein:

-A- is a Stretcher Unit,

a is 0 or 1,

each —W— is independently an Amino Acid Unit,

w is an integer ranging from 0 to 12,

p is an integer ranging from 1 to about 20; and

-D is a Drug Unit of the formula

wherein independently at each location:

R 2 is selected from the group consisting of -hydrogen, —C 1 -C 8 alkyl, —O—(C 1 -C 8 alkyl), -halogen, —NO 2 , —COOH, and —C(O)OR 11 ;

each R 3 is selected independently from the group consisting of -hydrogen and —C 1 -C 8 alkyl;

I is an integer ranging from 0-10;

R 4 is selected from the group consisting of -hydrogen, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, -aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle); and R 5 is selected from the group consisting of —H and -methyl; or R 4 and R 5 jointly have the formula —(CR a R b ) n —, wherein R a and R b are independently selected from the group consisting of —H, —C 1 -C 8 alkyl and —C 3 -C 8 carbocycle, n is selected from the group consisting of 2, 3, 4, 5 and 6, and form a ring with the carbon atom to which they are attached;

R 6 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 7 is selected from the group consisting of —H, —C 1 —C 8 alkyl, —C 3 -C 8 carbocycle, aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle);

each R 8 is independently selected from the group consisting of —H, —OH, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, —O-alkyl-(C 1 -C 8 carbocycle) and —O—(C 1 -C 8 alkyl);

R 9 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 10 is selected from the group consisting of aryl group and —C 3 -C 8 heterocycle;

Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 — where R 12 is C 1 -C 8 alkyl or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

2. The Conjugate Compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the Linker Unit has the general Formula Ib:

wherein R 17 is selected from the group consisting of —C 1 -C 10 alkylene-, —C 3 -C 8 carbocyclo-, —O—(C 1 -C 8 alkyl)-, - arylene-, —C 1 -C 10 alkylene-arylene-, -arylene—C 1 -C 10 alkylene-, —C 1 -C 10 alkylene-(C 3 -C 8 carbocyclo)-, -(C 1 -C 8 carbocyclo)—C 1 -C 10 alkylene-, —C 3 -C 8 heterocyclo-, —C 1 -C 10 alkylene-(C 3 -C 8 heterocyclo)-, —(C 3 -C 8 heterocyclo)—C 1 -C 10 alkylene-, —(CH 2 CH 2 O) r —, and —(CH 2 CH 2 O) r —CH 2 —; and r is an integer ranging from 1-100.

3. The Conjugate Compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the Drug Unit has the following formula:

wherein independently at each location:

R 4 is selected from the group consisting of -hydrogen, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, -aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle); and R 5 is selected from the group consisting of —H and -methyl; or R 4 and R 5 jointly have the formula —(CR a R b ) n —, wherein R a and R b are independently selected from the group consisting of —H, —C 1 -C 8 alkyl and —C 3 -C 8 carbocycle, n is selected from the group consisting of 2, 3, 4, 5 and 6, and form a ring with the carbon atom to which they are attached;

R 6 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 7 is selected from the group consisting of —H, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle);

each R 8 is independently selected from the group consisting of —H, —OH, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, —O-alkyl-(C 1 -C 8 carbocycle) and —O—(C 1 -C 8 alkyl);

R 9 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 19 is selected from the group consisting of aryl group and —C 3 -C 8 heterocycle;

Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 — where R 12 is C 1 -C 8 alkyl or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

4. The Conjugate Compound of claim 3 or a pharmaceutically acceptable salt thereof, wherein the Drug Unit has the following formula:

wherein independently as each location:

R 10 is selected from the group consisting of aryl group and —C 3 -C 8 heterocycle;

Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 —where R 12 is C 1 -C 8 alkyl or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r—CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

5. The Conjugate Compound of claim 4 or a pharmaceutically acceptable salt thereof, wherein the Drug Unit has the following formula:

wherein Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 —; where R 12 is C 1 -C 8 alkyl or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

6. The Conjugate Compound of claim 5 or a pharmaceutically acceptable salt thereof, wherein the Drug Unit has the following formula:

7. The Conjugate Compound of claim 1 or a pharmaceutically acceptable salt thereof, wherein the Ligand Unit is an antibody that binds to an antigen.

8. The Conjugate Compound of claim 7 or a pharmaceutically acceptable salt thereof, wherein the antibody a chimeric antibody, a humanized antibody, or a functionally active fragment thereof.

9. The Conjugate Compound of claim 7 or a pharmaceutically acceptable salt thereof, wherein the antibody is attached to the Linker Unit through a cysteine residue of the antibody.

10. The Conjugate Compound of claim 7 or a pharmaceutically acceptable salt thereof, wherein p is 2 to 8.

11. The Conjugate Compound of claim 10 or a pharmaceutically acceptable salt thereof, wherein p is 4.

12. The Conjugate Compound of claim 7 , having the formula:

or a pharmaceutically acceptable salt thereof, wherein Ab is an antibody, and S is a sulfur atom of the antibody.

13. The Conjugate Compound of claim 7 or a pharmaceutically acceptable salt thereof, having the formula:

wherein Ab is an antibody, and S is a sulfur atom of the antibody.

14. The Conjugate Compound of claim 7 , having the formula:

or a pharmaceutically acceptable salt thereof, wherein Ab is an antibody, and S is a sulfur atom of the antibody.

15. The Conjugate Compound of claim 14 having the formula:

or a pharmaceutically acceptable salt thereof, wherein Ab is an antibody, and S is a sulfur atom of the antibody.

16. The Conjugate Compound of claim 7 , wherein a Drug Linker Unit of the following formula or a pharmaceutically acceptable salt thereof is conjugated to the antibody:

17. The Conjugate Compound of claim 7 , wherein a Drug Linker Unit of the following formula or a pharmaceutically acceptable salt thereof is conjugated to the antibody:

18. A pharmaceutical composition, comprising

a Conjugate Compound of claim 1 or a pharmaceutically acceptable salt thereof;

a container; and

a package insert or label indicating that the compound can be used to treat cancer.

19. A Drug Compound having the Formula I:

or a pharmaceutically acceptable salt or solvate thereof; wherein, independently at each location:

R 2 is selected from the group consisting of -hydrogen —C 1 -C 8 alkyl, —O—(C 1 -C 8 alkyl), -halogen, —NO 2 , —COOH, and —C(O)OR″;

each R 3 is selected independently from the group consisting of -hydrogen and —C 1 -C 8 alkyl;

I is an integer ranging from 0-10;

R 4 is selected from the group consisting of -hydrogen, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, -aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 1 -C 8 heterocycle);

R 5 is selected from the group consisting of —H and -methyl; or R 4 and R 5 jointly have the formula —(CR a R b ) n —, wherein R a and R b are independently selected from the group consisting of —H, —C 1 -C 8 alkyl and —C 3 -C 8 carbocycle and n is selected from the group consisting of 2, 3, 4, 5 and 6, and form a ring with the carbon atom to which they are attached;

R 6 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 7 is selected from the group consisting of —H, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle);

each R 8 is independently selected from the group consisting of —H, —OH, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, —O-alkyl-(C 1 -C 8 carbocycle) and —O—(C 1 -C 8 alkyl);

R 9 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 10 is selected from the group consisting of aryl group and —C 3 -C 8 heterocycle;

Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 —where R 12 is C 1 -C 8 alkyl; or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

20. The Drug Compound of claim 19 having the following formula:

or a pharmaceutically acceptable salt thereof; wherein independently at each location:

R 4 is selected from the group consisting of -hydrogen, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, -aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle);

R 5 is selected from the group consisting of —H and -methyl; or R 4 and R 5 jointly have the formula —(CR a R b ) n —, wherein R a and R b are independently selected from the group consisting of —H, —C 1 -C 8 alkyl and —C 3 -C 8 carbocycle, n is selected from the group consisting of 2, 3, 4, 5 and 6, and form a ring with the carbon atom to which they are attached;

R 6 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 7 is selected from the group consisting of —H, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, aryl, —C 1 -C 8 alkyl-aryl, —C 1 -C 8 alkyl-(C 3 -C 8 carbocycle), —C 3 -C 8 heterocycle and —C 1 -C 8 alkyl-(C 3 -C 8 heterocycle);

each R 8 is independently selected from the group consisting of —H, —OH, —C 1 -C 8 alkyl, —C 3 -C 8 carbocycle, —O-alkyl-(C 1 -C 8 carbocycle) and —O—(C 1 -C 8 alkyl);

R 9 is selected from the group consisting of —H and —C 1 -C 8 alkyl;

R 10 is selected from the group consisting of aryl group and —C 3 -C 8 heterocycle;

Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 —where R 12 is C 1 -C 8 alkyl or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

21. The Drug Compound of claim 20 having the following formula:

or a pharmaceutically acceptable salt thereof; wherein independently as each location:

R 10 is selected from the group consisting of aryl group and —C 3 -C 8 heterocycle;

Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 —where R 12 is C 1 -C 8 alkyl or aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

22. The Drug Compound of claim 21 having the following formula:

or a pharmaceutically acceptable salt thereof; wherein Z is selected from the group consisting of —O—, —S—, —NH—, and —NR 12 —; where R 12 is C 1 -C 8 alkyl and aryl; and

R 11 is selected from the group consisting of —H, C 1 -C 8 alkyl, aryl, —C 3 -C 8 heterocycle, —(CH 2 CH 2 O) r —H, —(CH 2 CH 2 O) r —CH 3 , and —(CH 2 CH 2 O) r —CH 2 CH 2 C(O)OH;

wherein r is an integer ranging from 1-10.

23. The Drug Compound of claim 22 having the following formula:

or a pharmaceutically acceptable salt thereof.

24. A Linker Drug Conjugate having the following formula:

or a pharmaceutically acceptable salt thereof.

25. A Linker Drug Conjugate having the following formula:

or a pharmaceutically acceptable salt thereof.

26. A Linker Drug Conjugate having the following formula:

or a pharmaceutically acceptable salt thereof.

27. A Linker Drug Conjugate having the following formula:

or a pharmaceutically acceptable salt thereof.

28. A Conjugate Compound of claim 15 , having the following formula:

or a pharmaceutically acceptable salt thereof.

Assignments (2)
CHANGE OF NAME Recorded Feb 18, 2021
From: SEATTLE GENETICS, INC.
To: SEAGEN INC.
Reel/Frame 055334/0754 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 5, 2008
From: DORONINA, SVETLANA O.; MENDELSOHN, BRIAN A.
To: SEATTLE GENETICS, INC.
Reel/Frame 020605/0425 →