IP Library Patent Application 11676226
Patent Application
App. No. 11/676,226

COMPOSITIONS AND METHODS FOR COMPLEXES OF NUCLEIC ACIDS AND ORGANIC CATIONS

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Patent No.
US None
App. No.
11/676,226
Abstract

What is described is a stable double stranded (ds) nucleic acid molecule composition, comprising a dsRNA molecule complexed with an organic cation.

Claims (33)

1 . A method for producing a complex between a double stranded (ds) nucleic acid and an organic salt, comprising:

a. solubilizing the nucleic acid in an aqueous solution, wherein the nucleic acid is present with a first counterion;

b. mixing the solubilized nucleic acid with an organic salt; and

c. separating the nucleic acid from the first counterion.

2 . The method of claim 1 , wherein the ds nucleic acid is a dsRNA.

3 . The method of claim 2 , wherein the dsRNA is siRNA.

4 . The method of claim 3 , wherein siRNA has 19-50 base pairs.

5 . The method of claim 4 , wherein siRNA is comprised of a sequence that is complementary to a region of a TNF-alpha gene.

6 . The method of claim 1 , wherein the ds nucleic acid is a dsDNA.

7 . The method of claim 1 , wherein the organic salt is an organic cation.

8 . The method of claim 7 , wherein the organic cation is selected from the group consisting of: ammonium hydroxide, D-arginine, L-arginine, t-butylamine, calcium acetate hydrate, calcium carbonate, calcium DL-malate, calcium hydroxide, choline, ethanolamine, ethylenediamine, glycine, L-histidine, L-lysine, magnesium hydroxide, N-methyl-D-glucamine, L-ornithine hydrochloride, potassium hydroxide, procaine hydrochloride, L-proline, pyridoxine, L-serine, sodium hydroxide, DL-triptophan, tromethamine, L-tyrosine, L-valine, carnitine, taurine, creatine malate, arginine alpha keto glutarate, ornithine alpha keto glutarate, spermine acetate, and spermidine chloride.

9 . The method of claim 7 , wherein the organic cation is selected from the group consisting of N-methyl D-glucamine, choline, arginine, lysine, procaine, tromethamine (TRIS), spermine, N-methyl-morpholine, glucosamine, N,N-bis 2-hydroxyethyl glycine, diazabicycloundecene, creatine, arginine ethyl ester, amantadine, rimantadine, ornithine, taurine, and citrulline.

10 . A stable double stranded (ds) nucleic acid molecule composition, comprising a dsRNA molecule complexed with an organic salt.

11 . The composition of claim 10 , wherein the dsRNA is siRNA.

12 . The composition of claim 10 , wherein siRNA has 19-50 base pairs.

13 . The composition of claim 12 , wherein siRNA is comprised of a sequence that is complementary to a region of a TNF-alpha gene.

14 . The composition of claim 10 , wherein the ds nucleic acid is a dsDNA.

15 . The composition of claim 10 , wherein the organic salt is selected from the group consisting of sugar amines and acids, peptide amines and acids, biocompatible salts, hydrophilic salts, and salts naturally occurring in man.

16 . The composition of claim 10 , wherein the organic salt is an organic cation.

17 . The composition of claim 16 , wherein the organic cation is selected from the group consisting of: ammonium hydroxide, D-arginine, L-arginine, t-butylamine, calcium acetate hydrate, calcium carbonate, calcium DL-malate, calcium hydroxide, choline, ethanolamine, ethylenediamine, glycine, L-histidine, L-lysine, magnesium hydroxide, N-methyl-D-glucamine, L-ornithine hydrochloride, potassium hydroxide, procaine hydrochloride, L-proline, pyridoxine, L-serine, sodium hydroxide, DL-triptophan, tromethamine, L-tyrosine, L-valine, camitine, taurine, creatine malate, arginine alpha keto glutarate, ornithine alpha keto glutarate, spermine acetate, and spermidine chloride.

18 . The composition of claim 16 , wherein the organic cation is selected from the group consisting of N-methyl D-glucamine, choline, arginine, lysine, procaine, tromethamine (TRIS), spermine, N-methyl-morpholine, glucosamine, N,N-bis 2-hydroxyethyl glycine, diazabicycloundecene, creatine, arginine ethyl ester, amantadine, rimantadine, ornithine, taurine, and citrulline.

19 . A stable double stranded (ds) nucleic acid molecule composition, comprising a dsRNA molecule complexed with an organic salt, wherein the composition is produced by:

a. solubilizing the nucleic acid in an aqueous solution, wherein the nucleic acid is present with a first counterion;

b. mixing the solubilized nucleic acid with an organic salt; and

c. separating the nucleic acid from the first counterion.

20 . The composition of claim 19 , wherein the dsRNA is siRNA.

21 . The composition of claim 19 , wherein siRNA has 19-50 base pairs.

22 . The composition of claim 21 , wherein siRNA is comprised of a sequence that is complementary to a region of a TNF-alpha gene.

23 . The composition of claim 19 , wherein the ds nucleic acid is a dsDNA.

24 . The composition of claim 19 , wherein the organic salt is selected from the group consisting of sugar amines and acids, peptide amines and acids, biocompatible salts, hydrophilic salts, and salts naturally occurring in man.

25 . The composition of claim 19 , wherein the organic salt is an organic cation.

26 . The composition of claim 25 , wherein the organic cation is selected from the group consisting of: ammonium hydroxide, D-arginine, L-arginine, t-butylamine, calcium acetate hydrate, calcium carbonate, calcium DL-malate, calcium hydroxide, choline, ethanolamine, ethylenediamine, glycine, L-histidine, L-lysine, magnesium hydroxide, N-methyl-D-glucamine, L-ornithine hydrochloride, potassium hydroxide, procaine hydrochloride, L-proline, pyridoxine, L-serine, sodium hydroxide, DL-triptophan, tromethamine, L-tyrosine, L-valine, camitine, taurine, creatine malate, arginine alpha keto glutarate, ornithine alpha keto glutarate, spermine acetate, and spermidine chloride.

27 . The composition of claim 25 , wherein the organic cation is selected from the group consisting of N-methyl D-glucamine, choline, arginine, lysine, procaine, tromethamine (TRIS), spermine, N-methyl-morpholine, glucosamine, N,N-bis 2-hydroxyethyl glycine, diazabicycloundecene, creatine, arginine ethyl ester, amantadine, rimantadine, ornithine, taurine, and citrulline.

Assignments (6)
RELEASE OF SECURITY INTEREST Recorded Jul 30, 2010
From: CEQUENT PHARMACEUTICALS, INC.
To: MARINA BIOTECH, INC. (F/K/A MDRNA, INC.)
Reel/Frame 024767/0466 →
SECURITY AGREEMENT (PATENTS) Recorded Apr 28, 2010
From: MDRNA, INC. FKA NASTECH PHARMACEUTICAL COMPANY INC.
To: CEQUENT PHARMACEUTICALS, INC.
Reel/Frame 024300/0825 →
RELEASE OF SECURITY INTEREST Recorded Feb 23, 2010
From: EOS HOLDINGS LLC, AS AGENT
To: MDRNA, INC.; MDRNA RESEARCH, INC.; NASTECH PHARMACEUTICAL COMPANY, INC.
Reel/Frame 023973/0286 →
SECURITY AGREEMENT Recorded Dec 29, 2009
From: MDRNA, INC.; MDRNA RESEARCH, INC.; NASTECH PHARMACEUTICAL COMPANY, INC.
To: EOS HOLDINGS LLC, AS AGENT
Reel/Frame 023708/0389 →
CHANGE OF NAME Recorded Nov 10, 2009
From: NASTECH PHARMACEUTICAL COMPANY INC.
To: MDRNA, INC.
Reel/Frame 023495/0020 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 14, 2007
From: ADAMI, ROGER C.; COSTANTINO, HENRY R.; SWEEDLER, DAVID S.; QUAY, STEVEN C.
To: NASTECH PHARMACEUTICAL COMPANY INC.
Reel/Frame 019011/0476 →