Polymer backbone element tags
View Patent ↗Element tags based on novel metal-polymer conjugates are provided for elemental analysis of analytes, including ICP-MS. A polymer backbone is functionalized to irreversibly bind metals that are selected prior to use by the user. The polymer is further functionalized to attach a linker which allows for attachment to antibodies or other affinity reagents. The polymer format allows attachment of many copies of a given isotope, which linearly improves sensitivity. The metal-polymer conjugate tags enable multiplexed assay in two formats: bulk assay, where the average biomarker distribution in the sample is diagnostic, and single cell format to distinguish a rare (for example a diseased) cell in a complex sample (for example, blood).
1. An element tag comprising:
1) a copolymer comprising N-N-dimethyl acrylamide and N-acryloxysuccinimide, the copolymer having a polydispersity index from 1.02 to 1.2; and
2) at least one metal-binding pendant group covalently attached to the copolymer, the metal-binding pendant group selected from the group consisting of a diethylenetriaminepentaacetate (DTPA) ligand, a 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA) ligand, and an amide or an ester of any of the forgoing;
wherein at least one metal atom is bound to the at least one metal-binding pendant group.
2. The element tag of claim 1 further comprising a functional group that allows the copolymer to be attached to one of a linker, a spacer, or a biomolecule.
3. The element tag of claim 1 wherein the copolymer is water soluble.
4. The element tag of claim 1 wherein the copolymer is negatively charged.
5. The element tag of claim 1 wherein the at least one metal-binding pendant group is between 1 and 1000.
6. The element tag of claim 1 wherein the at least one metal-binding pendant group is between 10 and 250.
7. The element tag of claim 1 wherein the copolymer is selected from the group consisting of linear copolymers, branched copolymers, graft copolymers, block copolymers, star copolymers, and hyperbranched copolymers.
8. The element tag of claim 1 wherein the at least one metal-binding pendant group is attached to the copolymer through an ester or through an amide.
9. The element tag of claim 1 wherein the copolymer has a degree of polymerization of between approximately 1 and 1000.
10. The element tag of claim 1 wherein the copolymer has a degree of polymerization of between approximately 10 and 250.
11. The element tag of claim 2 wherein the functional group is a thiol-reactive group.
12. The element tag of claim 1 wherein the metal atom is a transition element, a lanthanide or an isotope of any of the foregoing.
13. The element tag of claim 2 further comprising a linker attached to the functional group of the copolymer, wherein the linker is capable of covalent attachment to a biomolecule.
14. The element tag of claim 13 further comprising a spacer attached to the linker, wherein the spacer is capable of attachment to a biomolecule.
15. The element tag of claim 14 wherein the spacer is a polyethylene glycol (PEG) spacer.
16. The element tag of claim 1 further comprising a spacer, wherein the spacer comprises a functional group that is capable of binding the spacer to the copolymer via a spacer-reactive functional group on the polymer.
17. The element tag of claim 16 wherein the spacer contains a functional group that is capable of binding a linker to the spacer.
18. The element tag of claim 1 covalently attached to a biomolecule.
19. The element tag of claim 18 wherein the biomolecule is an affinity reagent.
20. The element tag of claim 19 wherein the affinity reagent is an antibody.
21. An element tagged affinity reagent, wherein the affinity reagent is tagged with the element tag of claim 1 , and wherein at least one of the at least one metal-binding pendant group is bound to at least one metal atom.
22. An element tag prepared by a method comprising:
(i) providing a copolymer comprising N-N-dimethyl acrylamide and N-acryloxysuccinimide, the copolymer having a polydispersity index from 1.02 to 1.2; and
(ii) covalently attaching at least one metal-binding pendant group containing at least one metal atom to the copolymer;
wherein the at least one metal-binding pendant group is selected from the group consisting of diethylenetriaminepentaacetate (DTPA) ligand, a 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid (DOTA) ligand, and an amide or an ester of any of the foregoing.
23. The element tag of claim 1 having a polydispersity index of 1.1 to 1.2.
24. The element tag of claim 1 having a polydispersity index of 1.01 to 1.05.