Object centric data reformation with application to rib visualization
View Patent ↗A computer-implemented method for visualizing components of a 3D medical image includes the steps of performing a segmentation on the 3D medical image to generate a segmented structure, obtaining a surface definition based upon the segmented structure, and generating a series of 2D images using the surface definition and deformations of the surface definition.
1. A computer-implemented method for detecting abnormalities, comprising:
performing a segmentation on a 3D image to generate a first segmented structure and a second segmented structure that is distinct from the first;
generating a first distance map from the first segmented structure and a second distance map from the second segmented structure;
generating a first iso-surface from the first distance map and a second iso-surface from the second distance map,
wherein the first iso-surface entirely surrounds a first boundary contour that bounds the first segmented structure, and space is present between the first iso-surface and the first boundary contour,
wherein the second iso-surface entirely surrounds a second boundary contour that bounds the second segmented structure, and space is present between the second iso-surface and the second boundary contour;
generating a connected surface by connecting closest respective points of the first iso-surface and the second iso-surface together;
generating a series of 2D images using the connected surface; and
using the 2D images to detect abnormalities.
2. The method of claim 1 , wherein each of the 2D images is generated by sampling points on the connected surface and deformations of the connected surface within the 3D image.
3. The method of claim 1 , further comprising using the 2D images to generate segmentations of additional anatomic structures.
4. The method of claim 1 , wherein performing a segmentation on the 3D image to generate each segmented structure comprises applying a level set function to the 3D image.
5. The method of claim 1 , wherein performing a segmentation on the 3D image to generate each segmented structure comprises performing a seeded region growing operation on the 3D image.
6. The method of claim 1 , wherein each distance map is obtained by applying a fast marching method to the corresponding segmented structure.
7. The method of claim 1 , wherein the first segmented structure is representative of a first lung of a pair of lungs and the second segmented structure is representative of a second lung of the pair and the 2D images forms an image of ribs.
8. The method of claim 1 , wherein the 3D image comprises, a computed tomography (CT) image.
9. The method of claim 1 , further comprising, stacking the series of 2D images to form a new 3D volume.
10. The method of claim 1 , wherein the first and second iso-surfaces do not surround one another.
11. A computer implemented-method for generating a visualization of a series of 2D images of ribs, comprising:
performing a segmentation on a 3D image of a pair of lungs to generate a first segmented structure and a second segmented structure;
generating a first distance map from the first segmented structure and a second distance map from the second segmented structure;
selecting a first iso-surface from the first distance map and a second iso-surface from the second distance map,
wherein the first iso-surface entirely surrounds a first boundary contour that bounds the first segmented structure, each point of the first iso-surface is spaced apart a first distance away from a corresponding point of the first boundary contour, and
wherein the second iso-surface entirely surrounds a second boundary contour that bounds the second segmented structure, and each point of the second iso-surface is spaced apart a second distance away from a corresponding point of the second boundary contour;
generating a connected surface by connecting the first iso-surface to the second iso-surface; and
generating 2D images of the ribs using points derived from the connected surface.
12. The method of claim 11 , wherein the visualization is used for a computer aided diagnosis application to detect abnormalities of the ribs.
13. The method of claim 11 , wherein the visualization is used as a basis to perform a segmentation of the ribs.
14. The method of claim 11 , wherein generating a first distance map from the first segmented structure and a second distance map from the second segmented structure comprises, applying a fast marching method to the first segmented structure and the second segmented structure.
15. The method of claim 11 , wherein the 3D image comprises, a computed tomography (CT) image.
16. The method of claim 11 , wherein the first iso-surface is connected to the second iso-surface by connecting closest respective points of the first iso-surface and the second iso-surface together.
17. The method of claim 11 , wherein the first and second distances are substantially the same.
18. The method of claim 11 , wherein the first and second iso-surfaces do not surround one another.
19. A computer-implemented method for generating a visualization of a series of 2D images, comprising:
performing a segmentation on a 3D image to generate a first segmented structure and a second segmented structure that is distinct from the first;
generating a first distance map from the first segmented structure and a second distance map from the second segmented structure;
generating a first iso-surface from the first distance map and a second iso-surface from the second distance map,
wherein the first iso-surface entirely surrounds a first boundary contour that bounds the first segmented structure, and space is present between the first iso-surface and the first boundary contour,
wherein the second iso-surface entirely surrounds a second boundary contour that bounds the second segmented structure, and space is present between the second iso-surface and the second boundary contour;
generating a connected surface by connecting the first and the second iso-surface together; and
generating a series of 2D images from the connected surface.
20. The method of claim 19 , wherein the first and second iso-surfaces do not surround one another.