IP Library Granted Patent US 7,678,791
Granted Patent B2
US 7,678,791 · App. 11/827,467 · Granted Mar 16, 2010

Nitroheteroaryl-containing rifamycin derivatives

View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 7,678,791
App. No.
11/827,467
Granted
Mar 16, 2010
Kind
B2
Abstract

Substituted rifamycin derivatives in which a nitroimidazole, nitrothiazole or nitrofuran pharmacophore is covalently bonded to a rifamycin, methods of using the rifamycin derivatives, and pharmaceutical compositions containing the rifamycin derivatives are disclosed. Methods of synthesizing these substituted rifamycin derivatives are also disclosed. The rifamycin derivatives possess antibacterial activity, and are effective against a number of human and veterinary pathogens in the treatment of bacterial diseases.

Claims (63)

1. A compound of structural formula (I) as defined below:

or their pharmaceutically acceptable salt thereof,

wherein R 1 is a hydrogen or acetyl group, G is a structure of formula II, III, IV or V:

wherein, in formula II, III, IV or V, Q is N— or CR 2 —, which is bonded to a linkage group “L”, which in turn is bonded to a structure

and R 2 is a group selected from hydrogen, (C 1 -C 6 )alkyl, aryl, heteroaryl, or heterocycloalkyl group;

L is a bond, or a linker group selected from one or a combination of two to five of the following groups:

1) (C 1 -C 6 )alkylene,

2) (C 3 -C 8 )cycloalkylene,

3) arylene,

4) heteroarylene,

5) heterocycloalkylene containing 1 to 3 heteroatoms,

6) —C(═O)—,

7) —C(═N—O—R 3 )—,

8) —C═N—,

9) —O—,

10) —S(O) n —, wherein n is number between 0 and 2,

11) —N(R 4 )—,

wherein the carbon or nitrogen atoms of the linker group are unsubstituted or are independently substituted by 1 to 3 substituents selected from (C 1 -C 6 )alkyl, (C 1 -C 6 )alkyl, amino, (C 1 -C 6 )alkylamino, di(C 1 -C 6 )alkylamino, hydroxyl, (C 1 -C 6 )alkoxy or heterocycloalkyl group; R 3 and R 4 are independently a group selected from hydrogen, substituted or unsubstituted (C 1 -C 6 )alkyl, aryl, heteroaryl or heterocycloalkyl group; and

structure

is a structural formula VI, VII, VIII or IX:

wherein Y is a bond which is bonded to linkage group “L”, defined as above; and Z is a carbon (—CR 7 R 8 —), carbonyl (—C(O)—), amide (—C(O)NH—), sulfonamide (—S(O 2 )N—), or a heteroatom selected from N, O, S, SO or SO 2 ; wherein R 5 , R 6 , R 7 , and R 8 are independently a group selected from hydrogen, (C 1 -C 6 )alkyl, aryl, heteroaryl, or heterocycloalkyl group; R 5 and R 6 , R 7 and R 8 can join together to form a five to seven-member ring system optionally containing one to three heteroatoms, and

wherein if R 1 is an acetyl group, G is II, Q is N—, and L is —C(═O)—, then

is not VIII in which R 5 and R 6 are hydrogen.

2. The compound of claim 1 , wherein R 1 is acetyl group.

3. The compound of claim 1 , wherein L is a bond or a group selected from one or a combination of two to three groups of:

1) (C 1 -C 6 )alkylene,

2) (C 3 -C 8 )cycloalkylene,

3) heterocycloalkylene containing 1 to 3 heteroatoms,

4) —C(═O)—,

5) —O—, and

6) —N(R 4 )—,

wherein R 4 is selected from hydrogen, (C 1 -C 6 )alkyl, aryl, heteroaryl, and heterocycloalkyl groups that are all optionally substituted.

4. The compound of claim 1 , wherein the structure

is selected from the following nitroheteroaryl groups:

5. A compound selected from:

a. 4-Deoxy-3,4-[2-spiro-[1-[2-(2-methyl-5-nitro-imidazol-1-yl)ethyl]-piperidin-4-yl]]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

b. 4-Deoxy-3,4-[2-spiro-[1-[(5-nitro-thiazol-2-ylcarbamoyl)-methyl]-piperidin-4-yl]]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

c. 3′-Hydroxy-5′-[4-[2-(2-methyl-5-nitro-imidazol-1-yl)ethyl]-1-piperazinyl]benzoxazinorifamycin,

d. 3-[[[4-[2-(2-methyl-5-nitro-imidazol-1-yl)ethyl]-1-piperazinyl]imino]methyl]rifamycin SV,

e. 4-Deoxy-3,4-[2-spiro-[1-(2-methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethyl)-piperidin-4-yl]]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

f. 3-{4-[4-(6-Nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-benzyl]-piperazin-1-yl}rifamycin S,

g. 4-Deoxy-3,4-[2-[4-(6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-phenyl]]-(1H)-imidazo-rifamycin SV,

h. 3-{4-[4-(2-Methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-benzoyl]-piperazin-1-yl}rifamycin S,

i. 4-Deoxy-3,4-[2-spiro-[1-[4-[6S-(2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)]-benzyl]-piperidin-4-yl]]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

j. 3-{4-[4-[(65)-(2-Nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)]-benzyl]-piperazin-1-yl}rifamycin S,

k. 3-{4-[4-(2-Methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-benzyl]-piperazin-1-yl}rifamycin S,

l. 3′-Hydroxy-5′-[4-[4-(6S-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)-benzyl]-1-piperazinyl]benzoxazinorifamycin,

m. 4-Deoxy-3,4-[2-spiro-[1-[3-(6S-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)]-benzyl]-piperidin-4-yl]]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

n. 3-{4-[3-(6S-(2-Nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)]-benzyl]-piperazin-1-yl}rifamycin S,

o. 3′-Hydroxy-5′-[4-[3-(65′-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)-benzyl]-1-piperazinyl]benzoxazinorifamycin,

p. 3-[[[4-[4-(6S-2-Nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)-benzyl]-piperazin-1-yl]imino]methyl]rifamycin SV,

q. 4-Deoxy-3,4-[2-spiro-[1-[[4-(6S-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)-phenoxy]-acetyl]-piperidin-4-yl]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

r. 3-[4-[1-[4-(6S-2-Nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)-benzyl]-1H-[1,2,3]triazol-4-ylmethyl]-piperazin-1-yl]rifamycin S,

s. 3′-Hydroxy-5′-[4-[1-[4-(6S-2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxymethyl)-benzyl]-1H-[1,2,3]triazol-4-ylmethyl]-piperazin-1-yl]-benzoxazinorifamycin,

t. 3′-Hydroxy-5′-{4-[4-(2-methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-phenyl]-piperazin-1-yl}-benzoxazinorifamycin,

u. 3-(2-{4-[4-(2-Methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-phenyl]-piperazin-1-yl}) Rifamycin S,

v. 3-[4-(2-{4-[4-(2-methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethoxy)-phenyl]-piperazin-1-yl}-acetyl)-piperazin-1-yl]-rifamycin S,

w. 4-Deoxy-3,4-[2-spiro-[1-[2-(2-nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxy)-acetyl]-piperidin-4-yl]]-(1H)-imidazo-(2,5-dihydro)rifamycin S,

x. 2-[4-(2-Bromo-4-nitro-imidazol-1-ylmethyl)-4-hydroxy-piperidin-1-yl]-rifamycin S,

y. 3-{4-[2-(6S-2-Nitro-6,7-dihydro-5H-imidazo[2,1-b][1,3]oxazin-6-yloxy)-acetyl]-piperazin-1-yl}-rifamycin S, and

z. 3-[4-(2-Methyl-6-nitro-2,3-dihydro-imidazo[2,1-b]oxazol-2-ylmethyl)-piperazin-1-yl]rifamycin S.

6. A pharmaceutical composition, useful as a medicament for treatment of bacterial infections, comprising therapeutically effective amount of a compound in accordance with claim 1 in combination with a pharmaceutically acceptable carrier.

7. A method of treating bacterial infections in a patient in need of such treatment by administering a pharmaceutical composition as defined by claim 6 .

Assignments (6)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 26, 2021
From: TENNOR THERAPEUTICS LIMITED
To: TENNOR THERAPEUTICS (SUZHOU) LIMITED
Reel/Frame 057921/0982 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 15, 2015
From: CUMBRE IP VENTURES, L.P.
To: TENNOR THERAPEUTICS LIMITED
Reel/Frame 034721/0101 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 26, 2010
From: DING, CHARLES Z.; KIM, IN HO; WANG, JIANCHENG; JIN, YAFEI; COMBRINK, KEITH D.; LU, GENLIANG; LYNCH, A. SIMON
To: CUMBRE PHARMACEUTICALS INC.
Reel/Frame 023845/0905 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 26, 2010
From: MA, ZHENKUN
To: GLOBAL ALLIANCE FOR TB DRUG DEVELOPMENT
Reel/Frame 023846/0026 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 26, 2010
From: GLOBAL ALLIANCE FOR TB DRUG DEVELOPMENT
To: CUMBRE IP VENTURES, L.P.
Reel/Frame 023846/0106 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 13, 2009
From: CUMBRE PHARMACEUTICALS INC.
To: CUMBRE IP VENTURES, L.P.
Reel/Frame 022678/0001 →