Cyanovirin variant-polymer conjugates
View Patent ↗The present invention provides variants of cyanovirin-N and water-soluble polymer conjugates thereof, and methods of preparing such conjugates. The cyanovirin-N of the invention are particularly suited for site-selective covalent attachment of one or more water soluble polymers, to provide polymer conjugates of cyanovirin-N variants exhibiting antiviral activity.
1. A method for preparing an antiviral polypeptide-polymer conjugate, comprising:
(i) providing an antiviral polypeptide having at least 70% sequence identity to native cyanovirin-N (SEQ ID NO. 1), wherein said polypeptide is modified relative to SEQ ID NO: 1 to contain 1-4 reactive sites for selective conjugation, each said reactive site being selected from:
(a) a cysteine substitution or insertion of at least one position selected from the group consisting of 5, 9-21, 25, 29-40, 45-49, 52, 57, 59-72, 79-91, 96-101 of SEQ ID NO: 1, the C-terminus, and the N-terminus; and
(b) a single lysine residue remaining after arginine substitution of all but one of the lysine residues in the polypeptide;
or a fragment thereof, wherein the fragment includes the sequence set forth in residues 40-80 of SEQ ID NO: 1, modified to contain at least one said reactive site for selective conjugation; and
(ii) covalently attaching thereto, at at least one said reactive site for selective conjugation, a water-soluble polymer,
wherein said antiviral polypeptide-polymer conjugate has antiviral activity.
2. The method of claim 1 , wherein said antiviral polypeptide has fewer than ten non-conservative amino acid substitutions relative to native cyanovirin-N (SEQ ID NO. 1).
3. The method of claim 1 , wherein said antiviral polypeptide has a cysteine substitution or insertion at at least one position selected from the group consisting of 5, 9-21, 25, 29-40, 45-49, 52, 57, 59-72, 79-91, 96-101, the C-terminus, and the N-terminus; or an arginine substitution at at least four residues selected from the group consisting of 3, 48, 74, 84, and 99; and otherwise has the sequence set forth in SEQ ID NO: 1.
4. The method of claim 3 , wherein said positions are selected from the group consisting of 11, 14, 16, 19, 20, 31, 32, 33, 38, 46, 61, 62, 67, 68, 82, and 83.
5. The method of claim 4 , wherein said polypeptide has a single cysteine substitution, at position 62 or position 14.
6. The method of claim 1 , comprising attaching one or two water-soluble polymers to said antiviral polypeptide.
7. The method of claim 6 , comprising attaching a single water-soluble polymer at a cysteine substitution at position 14 or position 62 of said antiviral polypeptide.
8. The method of claim 1 , wherein the water soluble polymer is a polyethylene glycol (PEG).
9. An antiviral polypeptide having at least 70% sequence identity to native cyanovirin-N (SEQ ID NO. 1) and having fewer than ten non-conservative amino acid substitutions relative to native cyanovirin-N (SEQ ID NO. 1), wherein said polypeptide is modified relative to SEQ ID NO: 1 to contain 1-4 reactive sites for selective conjugation, each said reactive site being selected from:
(a) a cysteine substitution or insertion of at least one position selected from the group consisting of 5, 9-21, 25, 29-40, 45-49, 52, 57, 59-72, 79-91, 96-101 of SEQ ID NO: 1, the C-terminus, and the N-terminus; and
(b) a single lysine residue remaining after arginine substitution of all but one of the lysine residues in the polypeptide;
or a fragment thereof, wherein the fragment includes the sequence set forth in residues 40-80 of SEQ ID NO: 1, modified to contain at least one said reactive site for selective conjugation.
10. An antiviral polypeptide as recited in claim 9 , having at least 80% sequence identity to native cyanovirin-N (SEQ ID NO. 1).