METHODS OF IDENTIFYING ACTIVATORS OF LYN KINASE
The present invention relates to methods of identifying activators of lyn kinase by preincubating a test compound in the presence of lyn kinase; adding ATP and substrate to the lyn kinase and test compound; incubating the test compound, lyn kinase, ATP, and substrate; and measuring phosphorylation level of the substrate, whereby an increase in the phosphorylation of the substrate indicates that the test compound is an activator of lyn kinase.
1 . A method of identifying an activator of lyn kinase comprising:
preincubating a test compound in the presence of lyn kinase;
adding ATP and substrate to the lyn kinase and test compound;
incubating the test compound, lyn kinase, ATP, and substrate; and
measuring the phosphorylation level of the substrate, whereby an increase in the phosphorylation level of the substrate indicates that the test compound is an activator of lyn kinase.
2 . The method of claim 1 wherein the test compound is preincubated in the presence of lyn kinase from about 5 minutes to about 120 minutes.
3 - 5 . (canceled)
6 . The method of claim 1 wherein the test compound is preincubated in the presence of lyn kinase at about 0° C. to about 30° C.
7 - 8 . (canceled)
9 . The method of claim 1 wherein the concentration of the lyn kinase is from about 10 ng/ml to about 500 ng/ml.
10 . (canceled)
11 . The method of claim 1 wherein the concentration of ATP is from about 5 μM to about 25 μM.
12 . (canceled)
13 . The method of claim 1 wherein the ATP is radiolabelled.
14 . The method of claim 1 wherein the substrate is a protein or peptide that comprises a tyrosine.
15 . The method of claim 1 wherein the substrate is a synthetic FRET peptide comprising a tyrosine.
16 . The method of claim 1 wherein the test compound, lyn kinase, ATP, and substrate are incubated at about room temperature from about 5 minutes to about 90 minutes.
17 - 19 . (canceled)
20 . The method of claim 13 wherein measuring the phosphorylation level of the substrate comprises quantitatively or qualitatively measuring the radiolabelled substrate.
21 . The method of claim 15 wherein measuring the phosphorylation level of the substrate comprises quantitatively or qualitatively measuring the fluorescence of the synthetic FRET peptide substrate.
22 . The method of claim 1 wherein the incubation of the test compound, lyn kinase, ATP, and substrate takes place in the presence of from about 0.05% to about 0.25% bovine serum albumin, from about 0.5 mM to about 2.5 mM dithiothreitol, from about 0.05% to about 0.25% bovine serum albumin and from about 0.5 mM to about 2.5 mM dithiothreitol, or from about 0.05% to about 0.25% β-mercaptoethanol.
23 . The method of claim 1 wherein the incubation of the test compound, lyn kinase, ATP, and substrate takes place in the presence of from about 0.05% to about 0.25% β-mercaptoethanol.
24 . The method of claim 1 wherein the incubation of the test compound, lyn kinase, ATP, and substrate takes place in the presence of about 0.1% β-mercaptoethanol.
25 . The method of claim 1 wherein:
the test compound is preincubated in the presence of lyn kinase from about 5 minutes to about 120 minutes;
the test compound is preincubated in the presence of lyn kinase at about 0° C. to about 30° C.; and
the test compound, lyn kinase, ATP, and substrate are incubated at about room temperature from about 5 minutes to about 90 minutes, in the presence of from about 0.05% to about 0.25% β-mercaptoethanol.
26 - 28 . (canceled)
29 . The method of claim 1 wherein the test compound is a compound of formula II
wherein:
R 1 is an alkyl group;
X is a halogen;
Y is O, S, or NH;
Z is O or S;
n is an integer from 0 to 5 and m is 0 or 1, wherein m+n is less than or equal to 5.
30 - 37 . (canceled)
38 . The method of claim 29 wherein the test compound is
39 . A kit comprising lyn kinase, ATP, substrate, and instructions for carrying out the method of claim 1 .
40 . (canceled)
41 . A composition comprising a first compound of formula II:
wherein
each of R 1 , R 2 , R 3 , R 4 , R 5 , R 6 , and R 7 are independently a hydrogen, alkoxy, alkyl, alkenyl, alkynyl, aryl, aryloxy, benzyl, cycloalkyl, halogen, heteroaryl, heterocycloalkyl, —CN, —OH, —NO 2 , —CF 3 , —CO 2 H, —CO 2 alkyl, or —NH 2 ;
R 8 is alkyl or hydrogen;
X is O, S, NH, or N-alkyl; and
Z is O or S; or a pharmaceutically acceptable salt thereof; and
one or more second compounds, or pharmaceutically acceptable salt thereof, selected from the compounds listed in Table I.
42 . The composition of claim 41 wherein the first compound is of formula II
wherein:
R 1 is an alkyl group;
X is a halogen;
Y is O, S, or NH;
Z is O or S; and
n is an integer from 0 to 5 and m is 0 or 1, wherein m+n is less than or equal to 5.
43 . A method of treating diabetes in a human comprising administering to the human in need thereof a therapeutically effective amount of a composition of claim 41 .
44 . A pharmaceutical composition comprising a compound of formula II
wherein:
R 1 is an alkyl group;
X is a halogen;
Y is O, S, or NH;
Z is O or S; and
n is an integer from 0 to 5 and m is 0 or 1, wherein m+n is less than or equal to 5, or a pharmaceutically acceptable salt thereof; and
rosiglitazone.
45 . The pharmaceutical composition of claim 44 wherein the compound of formula II is
46 . The pharmaceutical composition of claim 44 wherein the compound of formula II is