IP Library Patent Application 12608227
Patent Application
App. No. 12/608,227

METHODS FOR SYNTHESIZING AND PURIFYING AMINOALKYL TETRACYCLINE COMPOUNDS

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Patent No.
US None
App. No.
12/608,227
Abstract

Methods for the synthesis and purification of 9-amino alkyl tetracycline compounds are described.

Claims (36)

1 . A method of purifying an alkylaminomethyl minocycline compound, comprising:

a) injecting a low pH aqueous solution of said alkylaminomethyl minocycline compound into a liquid chromatography device in a polar organic solvent gradient, and combining the product fractions;

b) adjusting the pH of said product fractions to 4.0-4.5;

c) washing said product fractions with a first non-polar organic solvent to form a first organic layer and a first aqueous layer, and discarding said first organic layer;

d) adjusting the pH of said first aqueous layer to 7.5-8.5; and

e) washing said first aqueous layer with a second non-polar organic solvent to form a second organic layer and a second aqueous layer, and discarding said second aqueous layer,

such that said alkylaminomethyl minocycline compound is purified.

2 . The method of claim 1 , wherein said low pH aqueous solution has a pH of 2-3.

3 . The method of claim 1 , wherein said low pH aqueous solution comprises methyl sulfonic acid.

4 . The method of claim 1 , wherein said polar organic solvent is acetonitrile.

5 . The method of claim 1 , wherein said pH in step b) or d) is adjusted with a base.

6 . The method of claim 5 , wherein said base is selected from the group consisting of metal hydroxide, metal carbonate, metal bicarbonate, ammonia, organic primary amine, organic secondary amine and organic tertiary amine

7 . The method of claim 6 , and wherein said metal is selected from the group consisting of lithium, sodium, potassium, calcium, magnesium and aluminum.

8 . The method of claim 6 , wherein said base is sodium hydroxide or ammonia.

9 . The method of claim 1 , wherein said first non-polar organic solvent is methylene chloride.

10 . The method of claim 1 , wherein said first organic layer comprises by-products, hydrophobic impurities and oxidative degradents of said alkylaminomethyl minocycline compound.

11 . The method of claim 1 , wherein said second non-polar organic solvent is methylene chloride.

12 . The method of claim 1 , wherein said second aqueous layer comprises by-products and β epimer of said alkylaminomethyl minocycline compound.

13 . The method of claim 1 , wherein an antioxidant is added.

14 . The method of claim 13 , wherein said antioxidant is ammonium sulfite, sodium sulfite, bisulfite or meta bisulfite.

15 . The method of claim 1 , wherein said alkylaminomethyl minocycline compound is:

wherein R A is alkyl, and R B is hydrogen or alkyl.

16 . The method of claim 15 , wherein R B is hydrogen.

17 . The method of claim 16 , wherein R A is alkyl.

18 . The method of claim 17 , wherein said alkyl is (CH 3 ) 3 CCH 2 —.

19 . The method of claim 1 , wherein said alkylaminomethyl minocycline compound is:

20 . The method of claim 1 , wherein hydrophobic impurities and oxidative degradents are removed from said alkylaminomethyl minocycline compound.

21 . The method of claim 1 , wherein by-products and β-C-4 epimer are removed from said alkylaminomethyl minocycline compound.

22 . The method of claim 1 , wherein said alkylaminomethyl minocycline compound is essentially free of hydrophobic impurities and oxidative degradents.

23 . The method of claim 1 , wherein said alkylaminomethyl minocycline compound is essentially free of by-products, β-C-4 epimer, hydrophobic impurities and oxidative degradents.

24 . The method of claim 1 , wherein said alkylaminomethyl minocycline compound comprises at least 50% α-C-4 epimer.

25 . The method of claim 24 , wherein said alkylaminomethyl minocycline compound comprises at least 95% α-C-4 epimer.

26 . The method of claim 25 , wherein said alkylaminomethyl minocycline compound comprises at least 99.9% α-C-4 epimer.

27 . The method of claim 1 , wherein said alkylaminomethyl minocycline compound comprises less than 7% β-C-4 epimer.

28 . The method of claim 27 , wherein said alkylaminomethyl minocycline compound comprises less than 3% β-C-4 epimer.

29 . A pharmaceutical composition comprising alkylaminomethyl minocycline compound purified by the method of claim 1 and a pharmaceutically acceptable carrier.

Assignments (5)
TERMINATION OF LIEN ON PATENTS Recorded Dec 23, 2014
From: MINTZ LEVIN COHN FERRIS GLOVSKY AND POPEO PC
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 034700/0377 →
RELEASE OF SECURITY INTEREST Recorded Oct 31, 2014
From: HBM HEALTHCARE INVESTMENTS (CAYMAN) LTD., AS COLLATERAL AGENT
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 034113/0910 →
SECURITY INTEREST Recorded Mar 14, 2014
From: PARATEK PHARMACEUTICALS, INC.
To: HBM HEALTHCARE INVESTMENTS (CAYMAN) LTD., AS COLLATERAL AGENT
Reel/Frame 032448/0001 →
NOTICE Recorded Mar 8, 2013
From: PARATEK PHARMACEUTICALS, INC.
To: MINTZ LEVIN COHN FERRIS GLOVSKY AND POPEO PC
Reel/Frame 029940/0106 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 20, 2010
From: JOHNSTON, SEAN; WARCHOL, TADEUSZ
To: PARATEK PHARMACEUTICALS, INC.
Reel/Frame 023813/0809 →