IP Library Granted Patent US 8,603,968
Granted Patent B2
US 8,603,968 · App. 12/682,129 · Granted Dec 10, 2013

Cyclic peptides comprising at least one aza-β3-aminoacyl residue and their uses

View Patent ↗
Loading inventors, assignments & file history…
Monitor This Case
Get email alerts when status or documents change.
Order Certified Copies
Most orders are placed with the USPTO same day — all within 24 business hours.
Order via The Patent Place →
Pre-filled with this patent's details
Quick Facts
Patent No.
US 8,603,968
App. No.
12/682,129
Granted
Dec 10, 2013
Kind
B2
Abstract

Cyclic peptides having a random alternation of L-α-aminoacyl residues and aza-β 3 -aminoacyl residues and their uses.

Claims (105)

1. A cyclic peptide having a random alternation of L-α-aminoacyl residues and aza-β 3 -aminoacyl residues corresponding to formula (A),

wherein,

R1 represents a proteogenic side chain,

providing that,

L-α-aminoacyl residues are always separated by one aza-β 3 -aminoacyl residue, and

the total number of L-α-aminoacyl residues and aza-β 3 -aminoacyl residues is between 4 and 8, inclusive.

2. The cyclic peptide according to claim 1 , wherein the peptide is a hexapeptide or an octapeptide.

3. The cyclic peptide according to claim 1 , wherein the L-α-aminoacyl residues are selected from the group consisting of: arginine, leucine, lysine, phenylalanine, serine, threonine and tryptophan.

4. The cyclic peptide according to claim 1 , wherein R1 represents a side chain of natural amino acid residues or non-natural amino acid residues.

5. The cyclic peptide according to claim 4 , wherein the natural amino acid residues are selected from the group consisting of: arginine, leucine, lysine, phenylalanine, serine, threonine and tryptophan residues.

6. The cyclic peptide according to claim 4 , wherein the non-natural amino acid residues are selected from the group consisting of:

1-naphthylalanine [(1)Nal],

2-naphthylalanine [(2)Nal],

4-phenyl-phenylalanine (4Bip),

diphenylalanine (Dip),

9-anthracenylalanine [(9)Ath],

4-pyridylalanine [(4)Pal],

3-pyridylalanine [(3)Pal],

2-pyridylalanine [(2)Pal],

fluorophenylalanine (4-Fpa),

dodecylalanine (Amy),

nonylalanine (Non),

octylalanine (Oct),

cyclohexylalanine (Cha),

4-fluoro-1-naphthylalanine (4-F-1-Nal),

homoserine (Hse),

homo γ-hydroxythreonine, and

norleucine (Nle) residues.

7. The cyclic peptide according to claim 1 , having the sequence (Ia):

c[azaβ 3 aa 1′ -aa 1 -azaβ 3 aa 2′ -aa 2 -azaβ 3 aa 2′ -aa 3 -(azaβ 3 aa 4′ )m 4 -(aa 4 )n 4 ]  (Ia)

wherein,

each of aa 1 , aa 2 , aa 3 , and aa 4 independently represents an L-α-aminoacyl residue,

each of azaβ 3 aa 1′ , azaβ 3 aa 2′ , azaβ 3 aa 2′ , and azaβ 3 aa 4′ independently represents an aza-β 3 -amino acid, corresponding to formula (A), and

m 4 and n 4 each simultaneously represent 0 or 1.

8. The cyclic peptide according to claim 1 , having the sequence (Ib):

c[aa 1 -azaβ 3 aa 1′ -aa 2 -azaβ 3 aa 2′ -aa 2 -azaβ 3 aa 2′ -(aa 4 )n 4 -(azaβ 3 aa 4′ )m 4 ]  (Ib)

wherein,

each of aa 1 , aa 2 , aa 2 , and aa 4 independently represents an L-α-aminoacyl residue,

each of azaβ 3 aa 4′ , azaβ 3 aa 2′ , azaβ 3 aa 2′ and azaβ 3 aa 4′ , independently represents an aza-β 3 -amino acid, corresponding to formula (A), and

m 4 and n 4 each simultaneously represent 0 or 1.

9. The cyclic peptide according to claim 1 , having the sequence (Ic):

c(azaβ 3 aa 1′ -azaβ 3 aa 2′ -azaβ 3 aa 2′ -aa 1 -azaβ 3 aa 4′ -aa 2 )  (Ic)

wherein,

each of aa 1 and aa 2 independently represents an L-α-aminoacyl residue,

each of azaβ 3 aa 4′ , azaβ 3 aa 2′ , azaβ 3 aa 2′ and azaβ 3 aa 4′ independently represents an aza-β 3 -amino acid, corresponding to formula (A).

10. The cyclic peptide according to claim 1 , having the sequence (Id):

c(azaβ 3 aa 1′ -azaβ 3 aa 2′ -aa 1 -azaβ 3 aa 1′ -aa 2 )  (Id)

wherein,

each of aa 1 and aa 2 independently represents an L-α-aminoacyl residue,

each of azaβ 3 aa 1′ and azaβ 3 aa 2′ independently represents an aza-β 3 -amino acid, corresponding to formula (A).

11. The cyclic peptide according to claim 7 , selected from the group consisting of the following sequences:

SEQ ID NO 1: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 (1)Nal-Leu-

azaβ 3 (1)Nal-] (NafNaf),

SEQ ID NO 2: c[-Lys- azaβ 3 Lys-Leu- azaβ 3 (1)Nal-Leu-

azaβ 3 (1)Nal-] (NalNal),

SEQ ID NO 3: c[-Lys- azaβ 3 Lys-Trp- azaβ 3 Leu-Trp-

azaβ 3 Leu-] (TrypTryp),

SEQ ID NO 4: c[-Lys- azaβ 3 Lys-Lys- azaβ 3 Leu-Trp-

azaβ 3 Leu-] (3KW),

SEQ ID NO 5: c[-Trp- azaβ 3 Lys-Lys- azaβ 3 Lys-Trp-

azaβ 3 Leu-] (3K2),

SEQ ID NO 6: c[-Lys- azaβ 3 Lys-Lys- azaβ 3 Lys-Trp-

azaβ 3 (1)Nal-] (4KW),

SEQ ID NO 7: c[-Ser- azaβ 3 (1)Nal-Phe- azaβ 3 Lys-Thr-

azaβ 3 Lys-Ser- azaβ 3 Lys-] (SNalF),

SEQ ID NO 8: c[Leu- azaβ 3 Arg-Arg- azaβ 3 (1)Nal-Leu-

azaβ 3 (1)Nal-] (RNaf),

SEQ ID NO 9: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 (1)Nal-]

azaβ 3 Leu- azaβ 3 (1)Nal-] (Nafaza)

SEQ ID NO 10: c[-Phe- azaβ 3 Lys-Lys- azaβ 3 (1)Nal-

Phe- azaβ 3 (1)Nal-] (PheNal),

SEQ ID NO 11: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 Leu- azaβ 3

(1)Nal-] (5pNala),

SEQ ID NO 12: c[- azaβ 3 Lys-Lys- azaβ 3 (1)Nal-Leu-

azaβ 3 (1)Nal-] (5pNafa).

SEQ ID NO 13: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 (1)-Nal-

Leu- azaβ 3 (4F-1)Nal-]( 4Fluo1Naf),

SEQ ID NO 14: c[-Lys- azaβ 3 Lys-Trp- azaβ 3 Oct-Trp-

azaβ 3 Oct-] (OctOct),

SEQ ID NO 15: c[-Lys- azaβ 3 Lys-Cha- azaβ 3 Amy-Trp-

azaβ 3 (1)Nal-] (Chado),

SEQ ID NO 16: c[-Arg- azaβ 3 Lys-Cha- azaβ 3 (4)Fpa-Trp-

azaβ 3 Cha-] (FluoKil),

SEQ ID NO 17: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 (2)Nal-Leu-

azaβ 3 (2)Nal-] (Naf2Naf2),

SEQ ID NO 18: c[-Phe- azaβ 3 Lys-Arg- azaβ 3 (2)Nal-Phe-

azaβ 3 (2)Nal-] (PheNar2),

SEQ ID NO 19: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 (1)Nal-Leu-

azaβ 3 (4)Fluo-(1)Nal-] (4FluoNaf),

SEQ ID NO 20: c[-Leu- azaβ 3 Lys-Lys- azaβ 3 Bip-Leu-

azaβ 3 Bip-] (BipBip),

SEQ ID NO 21: c[- azaβ 3 Lys-Lys- azaβ 3 Bip-Leu-

azaβ 3 Bip-] (5pBip),

SEQ ID NO 22: c[-Leu- azaβ 3 Arg-Arg- azaβ 3 (1)Nal-

Leu-] (5pRNaf),

SEQ ID NO 23: c[-Leu- azaβ 3 Lys-Lys-Leu- azaβ 3 (1)

Nal-] (5pNafaza),

SEQ ID NO 24: c[- azaβ 3 Lys-Arg- azaβ 3 (2)Nal-Phe-

azaβ 3 (2)Nal-] (5pPheNar2),

SEQ ID NO 25: c[- azaβ 3 Lys-Lys- azaβ 3 (2)Nal-Leu-

azaβ 3 (2)Nal-] (5pNaf2).

12. A medicament, comprising the cyclic peptide according to claim 1 .

13. The medicament according to claim 12 , wherein the medicament is an anti-infective agent or a disinfectant.

14. A pharmaceutical composition, comprising at least one cyclic peptide according to claim 1 combined with a pharmaceutically acceptable excipient.

15. A method of treating bacterial infections in humans or animals, comprising bringing said bacterial cells into contact with at least one cyclic peptide according to claim 1 , in a quantity of said cyclic peptide sufficient to cause death of the bacterial cells without causing death of cells of said human or said animal.

Assignments (2)
MERGER Recorded Oct 19, 2023
From: UNIVERSITE DE RENNES I
To: UNIVERSITE DE RENNES
Reel/Frame 065490/0667 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 26, 2010
From: LAURENCIN, MATHIEU; ZATYLNY-GAUDIN, CELINE; HENRY, JOEL; BAUDY FLOC'H, MICHELE
To: CENTRE NATIONAL DE LA RECHERCHE SCIENTIFIQUE; UNIVERSITE DE RENNES I
Reel/Frame 024740/0035 →