IP Library Granted Patent US 9,017,983
Granted Patent B2
US 9,017,983 · App. 12/772,114 · Granted Apr 28, 2015

Organisms for the production of 1,3-butanediol

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Quick Facts
Patent No.
US 9,017,983
App. No.
12/772,114
Granted
Apr 28, 2015
Kind
B2
Abstract

A non-naturally occurring microbial organism includes a microbial organism having a 1,3-butanediol (1,3-BDO) pathway having at least one exogenous nucleic acid encoding a 1,3-BDO pathway enzyme expressed in a sufficient amount to produce 1,3-BDO. The pathway includes an enzyme selected from a 2-amino-4-ketopentanoate (AKP) thiolase, an AKP dehydrogenase, a 2-amino-4-hydroxypentanoate aminotransferase, a 2-amino-4-hydroxypentanoate oxidoreductase (deaminating), a 2-oxo-4-hydroxypentanoate decarboxylase, a 3-hydroxybutyraldehyde reductase, an AKP aminotransferase, an AKP oxidoreductase (deaminating), a 2,4-dioxopentanoate decarboxylase, a 3-oxobutyraldehyde reductase (ketone reducing), a 3-oxobutyraldehyde reductase (aldehyde reducing), a 4-hydroxy-2-butanone reductase, an AKP decarboxylase, a 4-aminobutan-2-one aminotransferase, a 4-aminobutan-2-one oxidoreductase (deaminating), a 4-aminobutan-2-one ammonia-lyase, a butenone hydratase, an AKP ammonia-lyase, an acetylacrylate decarboxylase, an acetoacetyl-CoA reductase (CoA-dependent, aldehyde forming), an acetoacetyl-CoA reductase (CoA-dependent, alcohol forming), an acetoacetyl-CoA reductase (ketone reducing), a 3-hydroxybutyryl-CoA reductase (aldehyde forming), a 3-hydroxybutyryl-CoA reductase (alcohol forming), a 4-hydroxybutyryl-CoA dehydratase, and a crotonase. A method for producing 1,3-BDO, includes culturing such microbial organisms under conditions and for a sufficient period of time to produce 1,3-BDO.

Claims (9)

1. A non-naturally occurring microbial organism, comprising a set of enzymes that convert acetoacetyl-CoA to 1,3-butanediol, wherein said organism comprises at least two exogenous nucleic acids each encoding an enzyme of the set, which are expressed in a sufficient amount to produce the 1,3-butanediol, wherein the set of enzymes comprises:

an acetoacetyl-CoA reductase (ketone reducing) that converts acetoacetyl-CoA to 3-hydroxybutyryl-CoA; and

(i) a 3-hydroxybutyryl-CoA reductase (aldehyde forming) that converts 3-hydroxybutyryl-CoA to 3-hydroxybutyraldehyde; or

(ii) a 3-hydroxybutyraldehyde reductase that converts 3-hydroxybutyraldehyde to 1,3-butanediol;

and wherein said microbial organism produces 1,3-butanediol.

2. The non-naturally occurring microbial organism of claim 1 , wherein the microbial organism comprises three exogenous nucleic acids, each encoding an enzyme of the set.

3. The non-naturally occurring microbial organism of claim 1 , wherein at least one exogenous nucleic acid is a heterologous nucleic acid.

4. The non-naturally occurring microbial organism of claim 1 , wherein the at least two exogenous nucleic acids encode the acetoacetyl-CoA reductase (ketone reducing) and the 3-hydroxybutyryl-CoA reductase (aldehyde forming).

5. The non-naturally occurring microbial organism of claim 1 , wherein the at least two exogenous nucleic acids encode the acetoacetyl-CoA reductase (ketone reducing) and the 3-hydroxybutyraldehyde reductase.

Assignments (4)
SECURITY INTEREST Recorded Feb 10, 2026
From: GENOMATICA, INC.
To: AGAIN BIO APS
Reel/Frame 074708/0001 →
SECURITY INTEREST Recorded Dec 9, 2025
From: GENOMATICA, INC.
To: NOVO HOLDINGS A/S, AS COLLATERAL AGENT
Reel/Frame 073915/0027 →
SECURITY INTEREST Recorded Jun 2, 2025
From: GENOMATICA, INC.
To: OXFORD FINANCE LLC
Reel/Frame 071471/0770 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 9, 2010
From: BURGARD, ANTHONY P.; BURK, MARK J.; OSTERHOUT, ROBIN E.; PHARKYA, PRITI
To: GENOMATICA, INC.
Reel/Frame 024965/0622 →