IP Library Granted Patent US 9,005,900
Granted Patent B2
US 9,005,900 · App. 12/889,630 · Granted Apr 14, 2015

TLE3 as a marker for chemotherapy

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Quick Facts
Patent No.
US 9,005,900
App. No.
12/889,630
Granted
Apr 14, 2015
Kind
B2
Abstract

Methods of using TLE3 as a marker for predicting the likelihood that a patient's cancer will respond to chemotherapy. Methods of using TLE3 as a marker for selecting a chemotherapy for a cancer.

Claims (54)

1. A method of identifying a breast cancer that will respond favorably to a chemotherapy treatment that includes a taxane or taxane derivative, the method comprising:

(a) performing immunohistochemical staining for TLE3 polypeptide on a cancer sample obtained from a breast cancer patient, wherein the breast cancer patient is triple negative for estrogen receptor, progesterone receptor, and HER-2 markers;

(b) detecting a percentage and/or intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample, wherein the detected percentage and/or intensity is higher than a reference; and

(c) identifying the patient's breast cancer as one that will respond favorably to a chemotherapy treatment that includes a taxane or taxane derivative,

wherein the step of performing immunohistochemical staining comprises contacting the cancer sample with an antibody that binds TLE3 polypeptide thereby forming a complex comprising the antibody and TLE3 polypeptide, and the step of detecting comprises detecting the complex in the cancer sample.

2. The method of claim 1 , wherein the step of detecting comprises quantifying a percentage of cells in which immunohistochemical staining for TLE3 polypeptide is detected.

3. The method of claim 1 wherein the step of detecting comprises quantifying an intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample.

4. The method of claim 1 , wherein the step of identifying comprises identifying the patient's breast cancer as one that will respond favorably to a chemotherapy treatment that includes a taxane.

5. The method of claim 4 , wherein the taxane is paclitaxel or docetaxel.

6. The method of claim 1 , further comprising administering a chemotherapy treatment that includes a taxane or taxane derivative to the breast cancer patient.

7. A method of identifying a breast cancer that will respond favorably to a chemotherapy treatment that includes a taxane or taxane derivative, the method comprising:

(a) performing immunohistochemical staining for TLE3 polypeptide on a cancer sample obtained from a breast cancer patient, wherein the breast cancer patient is triple negative for estrogen receptor, progesterone receptor, and HER-2 markers;

(b) detecting a percentage and/or intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample, wherein the detected percentage and/or intensity is higher than a reference; and

(c) identifying the patient's breast cancer as one that will respond favorably to a chemotherapy treatment that includes a taxane or taxane derivative,

wherein the step of performing immunohistochemical staining comprises contacting the cancer sample with a primary antibody that binds TLE3 polypeptide and a labeled secondary antibody that binds the primary antibody thereby forming a complex comprising the primary antibody, secondary antibody and TLE3 polypeptide, and the step of detecting comprises detecting the complex in the cancer sample.

8. A method of predicting the likelihood that a breast cancer will respond to a chemotherapy treatment that includes a taxane or taxane derivative, the method comprising:

(a) performing immunohistochemical staining for TLE3 polypeptide on a cancer sample obtained from a breast cancer patient, wherein the breast cancer patient is triple negative for estrogen receptor, progesterone receptor, and HER-2 markers;

(b) detecting a percentage and/or intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample, wherein the detected percentage and/or intensity is higher than a reference; and

(c) predicting that the patient's breast cancer will likely respond to a chemotherapy treatment that includes a taxane or taxane derivative,

wherein the step of performing immunohistochemical staining comprises contacting the cancer sample with an antibody that binds TLE3 polypeptide thereby forming a complex comprising the antibody and TLE3 polypeptide, and the step of detecting comprises detecting the complex in the cancer sample.

9. The method of claim 8 , wherein the step of detecting comprises quantifying a percentage of cells in which immunohistochemical staining for TLE3 polypeptide is detected.

10. The method of claim 8 , wherein the step of detecting comprises quantifying an intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample.

11. The method of claim 8 , wherein the step of predicting comprises predicting that the patient's breast cancer will likely respond to a chemotherapy treatment that includes a taxane.

12. The method of claim 11 , wherein the taxane is paclitaxel or docetaxel.

13. The method of claim 8 further comprising administering a chemotherapy treatment that includes a taxane or taxane derivative to the breast cancer patient.

14. A method of predicting the likelihood that a breast cancer will respond to a chemotherapy treatment that includes a taxane or taxane derivative, the method comprising:

(a) performing immunohistochemical staining for TLE3 polypeptide on a cancer sample obtained from a breast cancer patient, wherein the breast cancer patient is triple negative for estrogen receptor, progesterone receptor, and HER-2 markers;

(b) detecting a percentage and/or intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample, wherein the detected percentage and/or intensity is higher than a reference; and

(c) predicting that the patient's breast cancer will likely respond to a chemotherapy treatment that includes a taxane or taxane derivative,

wherein the step of performing immunohistochemical staining comprises contacting the cancer sample with a primary antibody that binds TLE3 polypeptide and a labeled secondary antibody that binds the primary antibody thereby forming a complex comprising the primary antibody, secondary antibody and TLE3 polypeptide, and the step of detecting comprises detecting the complex in the cancer sample.

15. A method of treating a breast, lung or ovarian cancer patient, the method comprising:

(a) performing immunohistochemical staining for TLE3 polypeptide on a cancer sample obtained from a breast, lung or ovarian cancer patient;

(b) detecting a percentage and/or intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample, wherein the detected percentage and/or intensity is higher than a reference; and

(c) administering a chemotherapy treatment that includes a taxane or taxane derivative to the patient,

wherein the step of performing immunohistochemical staining comprises contacting the cancer sample with an antibody that binds TLE3 polypeptide thereby forming a complex comprising the antibody and TLE3 polypeptide and the step of detecting comprises detecting the complex in the cancer sample.

16. The method of claim 15 , wherein the step of detecting comprises quantifying a percentage of cells in which immunohistochemical staining for TLE3 polypeptide is detected.

17. The method of claim 15 , wherein the step of detecting comprises quantifying an intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample.

18. The method of claim 15 , wherein the cancer sample is obtained from a breast cancer patient.

19. The method of claim 15 , wherein the step of administering comprises administering a taxane.

20. The method of claim 19 , wherein the taxane is paclitaxel or docetaxel.

21. The method of claim 18 , wherein the breast cancer patient is triple negative for estrogen receptor, progesterone receptor, and HER-2 markers.

22. The method of claim 15 , wherein the cancer sample is obtained from a lung cancer patient.

23. The method of claim 22 , wherein the step of administering comprises administering a taxane.

24. The method of claim 23 , wherein the taxane is paclitaxel or docetaxel.

25. The method of claim 15 , wherein the cancer sample is obtained from an ovarian cancer patient.

26. The method of claim 25 , wherein the step of administering comprises administering a taxane.

27. The method of claim 26 , wherein the taxane is paclitaxel or docetaxel.

28. A method of treating a breast, lung or ovarian cancer patient, the method comprising:

(a) performing immunohistochemical staining for TLE3 polypeptide on a cancer sample obtained from a breast, lung or ovarian cancer patient;

(b) detecting a percentage and/or intensity of immunohistochemical staining for TLE3 polypeptide in the cancer sample, wherein the detected percentage and/or intensity is higher than a reference; and

(c) administering a chemotherapy treatment that includes a taxane or taxane derivative to the patient,

wherein the step of performing immunohistochemical staining comprises contacting the cancer sample with a primary antibody that binds TLE3 polypeptide and a labeled secondary antibody that binds the primary antibody thereby forming a complex comprising the primary antibody, secondary antibody and TLE3 polypeptide; and the step of detecting comprises detecting the complex in the cancer sample.

29. The method of claim 28 , wherein the cancer sample is obtained from a breast cancer patient, and the taxane is paclitaxel or docetaxel.

30. The method of claim 29 , wherein the breast cancer patient is triple negative for estrogen receptor, progesterone receptor, and HER-2 markers.

Assignments (8)
TERMINATION AND RELEASE OF SECURITY INTEREST IN PATENTS Recorded Jun 28, 2019
From: REGIONS BANK, AS COLLATERAL AGENT
To: CLARIENT DIAGNOSTIC SERVICES, INC.
Reel/Frame 049629/0243 →
RELEASE OF SECURITY INTEREST Recorded Dec 23, 2016
From: WELLS FARGO BANK, NATIONAL ASSOCIATION
To: CLARIENT, INC.; CLARIENT DIAGNOSTIC SERVICES, INC.
Reel/Frame 040759/0857 →
NOTICE OF GRANT OF SECURITY INTEREST IN PATENTS Recorded Dec 23, 2016
From: CLARIENT DIAGNOSTIC SERVICES, INC.
To: REGIONS BANK, AS COLLATERAL AGENT
Reel/Frame 041182/0700 →
RELEASE OF SECURITY INTEREST Recorded Dec 22, 2016
From: AB PRIVATE CREDIT INVESTORS LLC, AS COLLATERAL AGENT
To: NEOGENOMICS LABORATORIES, INC.; NEOGENOMICS, INC.; CLARIENT, INC.; CLARIENT DIAGNOSTIC SERVICES, INC.; PATH LABS, LLC
Reel/Frame 040754/0293 →
SECURITY INTEREST Recorded Jan 5, 2016
From: NEOGENOMICS LABORATORIES, INC.; NEOGENOMICS, INC.; CLARIENT, INC.; CLARIENT DIAGNOSTIC SERVICES, INC.; PATH LABS, LLC
To: AB PRIVATE CREDIT INVESTORS LLC, AS COLLATERAL AGENT
Reel/Frame 037408/0921 →
SECURITY INTEREST Recorded Dec 30, 2015
From: CLARIENT, INC.; CLARIENT DIAGNOSTIC SERVICES, INC.
To: WELLS FARGO BANK, NATIONAL ASSOCIATION
Reel/Frame 037386/0565 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 29, 2012
From: APPLIED GENOMICS, INC.
To: CLARIENT DIAGNOSTIC SERVICES, INC.
Reel/Frame 028468/0455 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 27, 2010
From: RING, BRIAN Z.; ROSS, DOUGLAS T.; SEITZ, ROBERT S.; BECK, RODNEY A.
To: APPLIED GENOMICS, INC.
Reel/Frame 025045/0109 →