IP Library Granted Patent US 9,096,873
Granted Patent B2
US 9,096,873 · App. 12/921,547 · Granted Aug 4, 2015

Adipate (ester or thioester) synthesis

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Quick Facts
Patent No.
US 9,096,873
App. No.
12/921,547
Granted
Aug 4, 2015
Kind
B2
Abstract

The present invention relates to a method for preparing an adipate ester or thioester. The invention further relates to a method for preparing adipic acid from said ester or thioester. Further the invention provides a number of methods for preparing an intermediate for said ester or thioester. Further the invention relates to a method for preparing 6-amino caproic acid (6-ACA), a method for preparing 5-formyl valeric acid (5-FVA), and a method for preparing caprolactam. Further, the invention relates to a host cell for use in a method according to the invention.

Claims (18)

1. A method for preparing an adipate ester or adipate thioester, comprising converting a 2,3-dehydroadipate ester or 2,3-dehydroadipate thioester into the adipate ester or thioester in the presence of a biocatalyst, wherein the biocatalyst comprises an enzyme, wherein said enzyme comprises the amino acid sequence of SEQ ID NO:42 or an amino acid sequence that has at least 95% sequence identity to SEQ ID NO:42, and wherein said enzyme catalyzes the conversion of 2,3-dehydroadipate ester or 2,3-dehydroadipate thioester into the adipate ester or thioester.

2. The method according to claim 1 , wherein the enzyme comprises the amino acid sequence of SEQ ID NO:42.

3. The method according to claim 1 , wherein said 2,3-dehydroadipate ester or 2,3-dehydroadipate thioester is prepared by converting a 3-hydroxyadipate ester or 3-hydroxyadipate thioester to 2,3-dehydroadipate ester or 2,3-dehydroxyadipate thioester, respectively.

4. The method according to claim 1 , wherein said biocatalyst is a host cell comprising said enzyme.

5. The method according to claim 4 , wherein said host cell is a microorganism.

6. The method according to claim 5 , wherein said microorganism is a bacterium, yeast or fungi.

7. The method according to claim 5 , wherein said microorganism is selected from the group consisting of Eschericia coli, Bacillus subtilis, Bacillus amyloliquefaciens, Corynebacterium glutamicum, Aspergillus niger, Penicillium chrysogenum, Pichia pastoris , and Saccharomyces cerevisiae.

8. The method according to claim 3 , wherein said 3-hydroxyadipate ester or 3-hydroxyadipate thioester is biocatalytically converted in the presence of a biocatalyst comprising an enzyme capable of catalysing the dehydration of a 3-hydroxyacyl ester or 3-hydroxyacyl thioester to 2-enoyl ester or 2-enoyl thioester.

9. The method according to claim 8 , wherein said enzyme capable of catalysing the dehydration of a 3-hydroxyacyl ester or 3-hydroxyacyl thioester to 2-enoyl ester or 2-enoyl thioester is selected from the group consisting of an enoyl-CoA hydratase, a 3-hydroxybutyryl-CoA dehydratase and a long-chain-enoyl-CoA hydratase.

10. The method according to claim 3 , wherein said 3-hydroxyadipate ester or 3-hydroxyadipate thioester is prepared by converting a 3-oxoadipate ester or 3-oxoadipate thioester to said 3-hydroxyadipate ester or 3-hydroxyadipate thioester, respectively.

11. The method according to claim 10 , wherein said 3-oxoadipate ester or 3-oxoadipate thioester is biocatalytically converted in the presence of a biocatalyst comprising an enzyme capable of catalysing the reduction of a carbonyl group to an alcohol group or capable of catalysing the reduction of a 3-oxoacyl ester or 3-oxoacyl thioester to 3-hydroxyacyl ester or 3-hydroxyacyl thioester.

12. The method accordingly to claim 11 , wherein said enzyme capable of catalysing the reduction of a carbonyl group to an alcohol group or capable of catalysing the reduction of a 3-oxoacyl ester or 3-oxoacyl thioester to 3-hydroxyacyl ester or 3-hydroxyacyl thioester is selected from the group consisting of a 3-hydroxyacyl-CoA dehydrogenase, a 3-hydroxybutanoyl-CoA dehydrogenase, a 3-hydroxypimeloyl-CoA dehydrogenase and a long-chain-3-hydroxyacyl-CoA dehydrogenase.

13. The method according to claim 10 , wherein said 3-oxoadipate ester or 3-oxoadipate thioester is prepared by converting a succinate ester or succinate thioester and an acetate ester or acetate thioester to 3-oxoadipate ester or 3-oxoadipate thioester.

14. The method according to claim 13 , wherein said 3-oxoadipate ester or 3-oxoadipate thioester is biocatalytically converted in the presence of a biocatalyst comprising an enzyme capable of acetyl-group transfer.

15. The method of claim 14 , wherein said enzyme capable of acetyl-group transfer is selected from the group consisting of an acetyl-CoA:acetyl-CoA C-acetyltransferase, an acyl-CoA:acetyl-CoA C-acetyltransferase and a succinyl-CoA:acetyl-CoA C-succinyltransferase.

16. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 97% sequence identity to SEQ ID NO:42.

17. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 98% sequence identity to SEQ ID NO:42.

18. The method of claim 1 , wherein said enzyme comprises an amino acid sequence that has at least 99% sequence identity to SEQ ID NO:42.

Assignments (5)
SECURITY INTEREST Recorded Feb 10, 2026
From: GENOMATICA, INC.
To: AGAIN BIO APS
Reel/Frame 074708/0001 →
SECURITY INTEREST Recorded Dec 9, 2025
From: GENOMATICA, INC.
To: NOVO HOLDINGS A/S, AS COLLATERAL AGENT
Reel/Frame 073915/0027 →
SECURITY INTEREST Recorded Jun 2, 2025
From: GENOMATICA, INC.
To: OXFORD FINANCE LLC
Reel/Frame 071471/0770 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 27, 2014
From: DSM IP ASSETS B.V.; DSM FIBRE INTERMEDIATES B.V.
To: GENOMATICA, INC.
Reel/Frame 032969/0886 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 26, 2011
From: WU, LIANG; TREFZER, AXEL CHRISTOPH; DE WILDEMAN, STEFAAN MARIE ANDRE; VAN DEN BERG, MARCO ALEXANDER
To: DSM IP ASSETS B.V.
Reel/Frame 026345/0932 →