IP Library Granted Patent US 8,580,803
Granted Patent B2
US 8,580,803 · App. 12/981,138 · Granted Nov 12, 2013

Substituted pyrrolo-aminopyrimidine compounds

Inventors: Yanbin Liu (Acton, MA); Nivedita Namdev (Westford, MA); Rocio Palma (North Andover, MA); Manish Tandon (Framingham, MA); Jianqiang Wang (Acton, MA); Hui Wu (Malden, MA)
Assignee: ArQule, Inc.
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Quick Facts
Patent No.
US 8,580,803
App. No.
12/981,138
Granted
Nov 12, 2013
Kind
B2
Abstract

The present invention relates to substituted pyrrolo-aminopyrimidine compounds and methods of synthesizing these compounds. The present invention also relates to pharmaceutical compositions containing substituted pyrrolo-aminopyrimidine compounds and methods of treating cell proliferative disorders, such as cancer, by administering these compounds and pharmaceutical compositions to subjects in need thereof. The substituted pyrrolo-aminopyrimidine compounds have the following general formula:

Claims (62)

1. A compound of Formula I, or a pharmaceutically acceptable salt thereof:

wherein:

X is CH or N;

R 1 is H or unsubstituted or substituted C 1 -C 6 alkyl;

R a1 and R a2 are each independently H, —NHR 2 , —(CH 2 ) m YR 2 , —C(O)YR 2 , —NHC(O)R 2 , halogen, —NHC(O)NHR 2 , unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, or

when adjacent, R a1 and R a2 , together with the carbon atoms to which they are attached, form an unsubstituted or substituted aryl comprising one or two 5- or 6-member rings, an unsubstituted or substituted C 3 -C 8 carbocycle, an unsubstituted or substituted heteroaryl comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S, or an unsubstituted or substituted heterocycle comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S;

R 2 is H, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 1 -C 6 alkoxy, unsubstituted or substituted C 1 -C 6 alkoxycarbonyl, unsubstituted or substituted aminocarbonyl, unsubstituted or substituted C 1 -C 6 alkylcarbonylamino, unsubstituted or substituted di-C 1 -C 6 -alkylamino, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, or R 2 and Z, together with the nitrogen atom to which they are attached, form a 5- or 6-member ring which optionally comprises 1-3 additional heteroatoms selected from N, O and S and is optionally substituted;

Y is NH, NZ or O, provided that when Y is NZ, then Z and R 2 , together with the nitrogen atom to which they are attached, form a 5- or 6-member ring which optionally comprises 1-3 additional heteroatoms selected from N, O and S and is optionally substituted;

m is 0, 1, 2 or 3;

R b1 , R b2 , R b3 , R b4 and R b5 are each independently H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, —(CH 2 ) p OR 3 , or

any two adjacent of R b1 , R b2 , R b3 , R b4 and R b5 , together with the carbon atoms to which they are attached, form an unsubstituted or substituted aryl comprising one or two 5- or 6-member rings, an unsubstituted or substituted C 3 -C 8 carbocycle, an unsubstituted or substituted heteroaryl comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S, or an unsubstituted or substituted heterocycle comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S;

R 3 is H, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, or unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S; and

p is 0, 1, 2, 3 or 4.

2. The compound of claim 1 , wherein X is CH and R 1 is H.

3. The compound of claim 2 , wherein R a1 is —NHC(O)R 2 .

4. The compound of claim 2 , wherein R a1 is —C(O)YR 2 .

5. A compound of Formula II, or a pharmaceutically acceptable salt thereof:

wherein:

R 1 is H or unsubstituted or substituted C 1 -C 6 alkyl;

T is unsubstituted or substituted C 1 -C 6 alkyl linker or a bond;

Q is H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, halogen substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, OR 5 , NR 5 R 6 , NR 6 C(O)R 5 , NR 6 C(O)OR 5 , NHC(O)NR 5 R 6 , C(O)R 5 , C(O)OR 5 , C(O)NR 5 R 6 or NHS(O) 2 R 5 ;

R b1 , R b2 , R b3 , R b4 and R b5 are each independently H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, —(CH 2 ) p OR 3 , or

any two adjacent of R b1 , R b2 , R b3 , R b4 and R b5 , together with the carbon atoms to which they are attached, form an unsubstituted or substituted aryl comprising one or two 5- or 6-member rings, an unsubstituted or substituted C 3 -C 8 carbocycle, an unsubstituted or substituted heteroaryl comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S, or an unsubstituted or substituted heterocycle comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S;

R 3 , R 5 and R 6 are each independently H, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, or R 5 and R 6 , together with the nitrogen atom to which they are attached, form a 5- or 6-member ring which optionally comprises 1-3 additional heteroatoms selected from N, O and S and is optionally substituted; and

p is 0, 1, 2, 3 or 4.

6. The compound of claim 5 , wherein R 1 is H.

7. The compound of claim 6 , wherein Q is unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S.

8. The compound of claim 6 , wherein Q is unsubstituted or substituted C 1 -C 6 alkyl.

9. A compound of Formula III, or a pharmaceutically acceptable salt thereof:

wherein:

R 1 is H or unsubstituted or substituted C 1 -C 6 alkyl;

T is unsubstituted or substituted C 1 -C 6 alkyl linker or a bond;

Q is H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, halogen substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, OR 5 , NR 5 R 6 , NR 6 C(O)R 5 , NR 6 C(O)OR 5 , NHC(O)NR 5 R 6 , C(O)R 5 , C(O)OR 5 , C(O)NR 5 R 6 or NHS(O) 2 R 5 ;

R b1 , R b2 , R b3 , R b4 and R b5 are each independently H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, —(CH 2 ) p OR 3 , or

any two adjacent of R b1 , R b2 , R b3 , R b4 and R b5 , together with the carbon atoms to which they are attached, form an unsubstituted or substituted aryl comprising one or two 5- or 6-member rings, an unsubstituted or substituted C 3 -C 8 carbocycle, an unsubstituted or substituted heteroaryl comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S, or an unsubstituted or substituted heterocycle comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S;

R 3 , R 5 and R 6 are each independently H, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, or R 5 and R 6 , together with the nitrogen atom to which they are attached, form a 5- or 6-member ring which optionally comprises 1-3 additional heteroatoms selected from N, O and S and is optionally substituted; and

p is 0, 1, 2, 3 or 4.

10. The compound of claim 9 , wherein R 1 is H.

11. The compound of claim 10 , wherein Q is unsubstituted or substituted phenyl.

12. The compound of claim 10 , wherein Q is unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S.

13. A compound of Formula IV, or a pharmaceutically acceptable salt thereof:

wherein:

R 1 is H or unsubstituted or substituted C 1 -C 6 alkyl;

T is unsubstituted or substituted C 1 -C 6 alkyl linker or a bond;

Q is H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, halogen substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, OR 5 , NR 5 R 6 , NR 6 C(O)R 5 , NR 6 C(O)OR 5 , NHC(O)NR 5 R 6 , C(O)R 5 , C(O)OR 5 , C(O)NR 5 R 6 or NHS(O) 2 R 5 ;

R b1 , R b2 , R b3 , R b4 and R b5 are each independently H, halogen, cyano, nitro, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, —(CH 2 ) p OR 3 , or

any two adjacent of R b1 , R b2 , R b3 , R b4 and R b5 , together with the carbon atoms to which they are attached, form an unsubstituted or substituted aryl comprising one or two 5- or 6-member rings, an unsubstituted or substituted C 3 -C 8 carbocycle, an unsubstituted or substituted heteroaryl comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S, or an unsubstituted or substituted heterocycle comprising one or two 5- to 6-member rings which comprises 1-4 heteroatoms selected from N, O and S;

R 3 , R 5 and R 6 are each independently H, unsubstituted or substituted C 1 -C 6 alkyl, unsubstituted or substituted C 6 -C 10 aryl, unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, unsubstituted or substituted C 3 -C 10 carbocycle, unsubstituted or substituted heterocycle comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S, or R 5 and R 6 , together with the nitrogen atom to which they are attached, form a 5- or 6-member ring which optionally comprises 1-3 additional heteroatoms selected from N, O and S and is optionally substituted; and

p is 0, 1, 2, 3 or 4.

14. The compound of claim 13 , wherein R 1 is H.

15. The compound of claim 14 , wherein Q is unsubstituted or substituted heteroaryl comprising one or two 5- or 6-member rings and 1-4 heteroatoms selected from N, O and S.

16. The compound of claim 14 , wherein Q is unsubstituted or substituted di-C 1 -C 6 -alkylamino.

17. A pharmaceutical composition comprising a compound of claim 1 and a pharmaceutically acceptable carrier.

18. A pharmaceutical composition comprising a compound of claim 5 and a pharmaceutically acceptable carrier.

19. A pharmaceutical composition comprising a compound of claim 9 and a pharmaceutically acceptable carrier.

20. A pharmaceutical composition comprising a compound of claim 13 and a pharmaceutically acceptable carrier.

21. A compound selected from the group consisting of:

or a pharmaceutically acceptable salt thereof.

22. A pharmaceutical composition comprising a compound of claim 21 and a pharmaceutically acceptable carrier.

23. A compound:

or a pharmaceutically acceptable salt thereof.

24. A pharmaceutical composition comprising the compound of claim 23 and a pharmaceutically acceptable carrier.

Assignments (1)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 10, 2011
From: LIU, YANBIN; NAMDEV, NIVEDITA; PALMA, ROCIO; TANDON, MANISH; WANG, JIANQIANG; WU, HUI
To: ARQULE, INC.
Reel/Frame 025932/0918 →
Continuity (2)
Provisional Application 61290936 · Dec 30, 2009
Related Publication 20110160203A1 · Jun 30, 2011