IP Library Granted Patent US 8,372,608
Granted Patent B2
US 8,372,608 · App. 13/053,404 · Granted Feb 12, 2013

Processes for making [R]-ethyl 4-cyano-3 hydroxybutyric acid

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Quick Facts
Patent No.
US 8,372,608
App. No.
13/053,404
Granted
Feb 12, 2013
Kind
B2
Abstract

The invention provides novel processes for making ethyl-4-cyano-3-hydroxybutyrate, e.g., (R)-ethyl 4-cyano-3-hydroxybutyric acid, and 4-cyano-3-hydroxybutyric acid. The invention provides protocols for making and 4-cyano-3-hydroxybutyric acid and ethyl-4-cyano-3-hydroxybutyrate by whole cell processes, cell lysate processes, “one pot processes” and “multi-pot” processes using a variety of parameters.

Claims (22)

1. A method for making 4-cyano-3-hydroxybutyric acid comprising the following steps

(a) providing a 3-hydroxyglutaronitrile;

(b) providing a polypeptide having a nitrilase activity, wherein the polypeptide is encoded by a nucleic acid at least 85% identical to SEQ ID NO:209; and

(c) catalyzing the conversion of the 3-hydroxyglutaronitrile to 4-cyano-3-hydroxybutyric acid by contacting the 3-hydroxyglutaronitrile, with the polypeptide having a nitrilase activity.

2. A method for making 4-cyano-3-hydroxybutyric acid comprising the following steps

(a) providing an epichlorohydrin;

(b) providing a polypeptide having a nitrilase activity, wherein the polypeptide is encoded by a nucleic acid at least 85% identical to SEQ ID NO:209;

(c) converting the epichlorohydrin to 3-hydroxyglutaronitrile; and

(d) catalyzing the conversion of the 3-hydroxyglutaronitrile to 4-cyano-3-hydroxybutyric acid by contacting the 3-hydroxyglutaronitrile with the polypeptide having a nitrilase activity.

3. A method for making ethyl-4-cyano-3-hydroxybutyric acid comprising the following steps

(a) providing a 3-hydroxyglutaronitrile;

(b) providing a polypeptide having a nitrilase activity, wherein the polypeptide is encoded by a nucleic acid at least 85% identical to SEQ ID NO:209;

(c) catalyzing the conversion of the 3-hydroxyglutaronitrile to 4-cyano-3-hydroxybutyric acid by contacting the 3-hydroxyglutaronitrile, with the polypeptide having a nitrilase activity; and

(d) converting the 4-cyano-3-hydroxybutyric acid to ethyl-4-cyano-3-hydroxybutyric acid.

4. The method of claim 2 , wherein the epichlorohydrin is converted to 3-hydroxyglutaronitrile by cyanide treatment.

5. The method of claim 1 further comprising conversion of the 4-cyano-3-hydroxybutyric acid to ethyl-4-cyano-3-hydroxybutyric acid.

6. The method of claim 1 wherein the reaction is a one-pot reaction.

7. The method of claim 1 wherein at least two steps of the reaction take place in sequential pots.

8. The method of claim 1 further comprising converting the 4-cyano-3-hydroxybutyric acid to its potassium salt by reaction with a potassium hydroxide in water, methanol or ethanol.

9. The method of claim 2 , wherein the preparation of hydroxyglutaronitrile from epichlorohydrin is followed by the addition of a neutralizing agent, a buffer or a diluent, and then subsequent conversion to 4-cyano-3-hydroxybutyric acid with the nitrilase.

10. The method of claim 1 , wherein the nitrilase comprises a sequence as set forth in SEQ ID NO:210 and having a mutation at residue 190, wherein alanine at residue 190 is replaced with a hydrogen-binding amino acid residue.

11. The method of claim 1 , wherein the nitrilase comprises a sequence as set forth in SEQ ID NO:210 and having a mutation at residue 190, wherein alanine at residue 190 is replaced with a hydrophobic amino acid residue.

Assignments (6)
RELEASE OF SECURITY INTEREST Recorded Jan 9, 2014
From: ATHYRIUM OPPORTUNITIES FUND (A) LP
To: VERENIUM CORPORATION
Reel/Frame 031956/0016 →
CORRECTIVE ASSIGNMENT TO CORRECT THE EXECUTION DATE OF ASSIGNOR GRACE DESANTIS FROM 10/01/2003 TO 10/10/2003 PREVIOUSLY RECORDED ON REEL 026563 FRAME 0841. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT OF ASSIGNOR'S INTEREST TO VERENIUM CORPORATION.. Recorded Aug 26, 2013
From: BURK, MARK J.; DESANTIS, GRACE; MORGAN, BRIAN; ZHU, ZOULIN; DIVERSA CORPORATION
To: VERENIUM CORPORATION
Reel/Frame 031086/0678 →
NOTICE OF GRANT OF SECURITY INTEREST IN PATENTS Recorded Dec 11, 2012
From: VERENIUM CORPORATION
To: ATHYRIUM OPPORTUNITIES FUND (A) LP
Reel/Frame 029444/0119 →
RELEASE OF SECURITY INTEREST Recorded Jun 1, 2012
From: COMERICA BANK
To: VERENIUM CORPORATION
Reel/Frame 028301/0456 →
SECURITY AGREEMENT Recorded Nov 3, 2011
From: VERENIUM CORPORATION, A DELAWARE CORPORATION
To: COMERICA BANK, A TEXAS BANKING ASSOCIATION
Reel/Frame 027170/0824 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 8, 2011
From: BURK, MARK J.; DESANTIS, GRACE; MORGAN, BRIAN; ZHU, ZOULIN; DIVERSA CORPORATION
To: VERENIUM CORPORATION
Reel/Frame 026563/0841 →