Method of Prenatal Molecular Diagnosis of Down Syndrome and Other Trisomic Disorders
The present invention encompasses a method of diagnosing chromosomal trisomy in a human subject. In one embodiment, the method comprises pyrosequencing at least one single nucleotide polymorphism on a chromosome being assessed for trisomy, where the SNP comprises two alleles.
1 . A method of diagnosing chromosomal trisomy in a human subject, said method comprising pyrosequencing at least one single nucleotide polymorphism on a chromosome being assessed for trisomy, wherein said SNP comprises two alleles, said method of pyrosequencing comprising the steps of:
a) contacting an isolated DNA sample from said subject with at least one informative primer that specifically binds at a position adjacent to a single nucleotide polymorphism on a chromosome being assessed for trisomy of said subject under conditions suitable for elongation of a nucleic acid complementary to said isolated DNA sample, wherein the number of said expected elongated nucleic acids corresponds to the number of primers that bind to the DNA sample;
b) elongating said nucleic acid complementary to said isolated DNA sample, wherein incorporation of a deoxynucleotide triphosphate into said complementary strand creates a detectable signal, wherein said detectable signal represents the presence of one or two alleles; and,
e) detecting the allelic ratio or the relative allele strength (RAS) of said detectable signals of the two alleles, wherein when the allelic ratio of the two alleles is about 2:1 or the RAS of the two alleles is about 66%:33%, then said subject is diagnosed as having trisomy of said chromosome.
2 . The method of claim 1 , wherein the chromosome being assessed for trisomy is selected from the group consisting of chromosome 21, chromosome 18, chromosome 16, chromosome 13, chromosome 12, chromosome 9, chromosome 8, and any combination thereof.
3 . The method of claim 1 , wherein said primers are selected from the group consisting of SEQ ID NO. 1-9.
4 . The method of claim 1 , wherein said human subject is a fetus.
5 . A kit for diagnosing a chromosomal trisomy in a human subject, said kit comprising at least one primer that specifically binds at a position adjacent to a single nucleotide polymorphism on a chromosome present in an isolated DNA sample obtained from said subject, an applicator, and instructional material for the use thereof.
6 . The kit of claim 5 , wherein the chromosome being assessed for trisomy is selected from the group consisting of chromosome 21, chromosome 18, chromosome 16, chromosome 13, chromosome 12, chromosome 9, chromosome 8, and any combination thereof.
7 . The kit of claim 5 , wherein said primers are selected from the group consisting of SEQ ID NO. 1-9.
8 . The kit of claim 7 , wherein said human is a fetus.