IP Library Patent Application 13492159
Patent Application
App. No. 13/492,159

THERAPEUTICALLY ACTIVE COMPOSITIONS AND THEIR METHODS OF USE

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Patent No.
US None
App. No.
13/492,159
Abstract

Compounds and compositions comprising compounds useful in the treatment of cancer are described herein.

Claims (98)

1 . A method of treating a cancer characterized as having an IDH mutation, the method comprising administering to a subject a therapeutically effective amount of a compound of formula (I) or a pharmaceutically acceptable salt thereof, wherein:

wherein:

W, X, Y and Z are each independently selected from CH or N;

B and B 1 are independently selected from hydrogen, alkyl or when taken together with the carbon to which they are attached form a carbonyl group;

Q is C═O or SO 2 ;

D and D 1 are independently selected from a bond, oxygen or NR c ;

A is aryl or heteroaryl each substituted with 0-3 occurrences of R 2 ;

R 1 is independently selected from alkyl, acyl, cycloalkyl, aryl, heteroaryl, heterocyclyl, heterocyclylalkyl, cycloalkylalkyl, aralkyl, and heteroaralkyl; each of which may be optionally substituted with 0-3 occurrences of R d ;

each R 2 is independently selected from halo, hydroxy, haloalkyl, aryl, heteroaryl, alkyl, —NR c R c′ alkyl-NR c R c′ , —OR a , —C(O)OH, —C(O)OR b , —C(O)NR c R c′ , cycloalkyl, heterocyclyl, heterocyclylalkyl, cycloalkylalkyl, aralkyl, or heteroaralkyl;

each R 3 is independently selected from halo, haloalkyl, alkyl, alkenyl, alkynyl, heterocyclyl and —OR a , or two adjacent R 3 s (when n is 2) taken together with the carbon atoms they are attached to form an optionally substituted heterocyclyl;

each R a is independently selected from alkyl, alkoxy, alkylalkoxy, alkylalkoxylalkoxy, alkyl-C(O)OR b , alkyl-C(O)OR b , and haloalkyl;

each R b is independently alkyl;

each R c and R c′ is independently selected from hydrogen, alkyl, alkyl-C(O)OR b and alkenyl;

each R d is independently selected from halo, haloalkyl, alkyl, nitro, cyano, and —OR a , or two R d taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl;

n is 0, 1, or 2;

h is 0, 1, 2; and

g is 0, 1 or 2.

2 . The method of claim 1 , wherein the compound is selected from any one of the compounds set forth in the table below:

Compound

3 . The method of claim 1 or 2 , wherein the compound or pharmaceutically acceptable salt thereof is formulated into a pharmaceutical together with a pharmaceutically acceptable carrier.

4 . The method of any one of claims 1 to 3 , wherein the subject is evaluated for the presence of an IDH1 R132X mutant allele prior to administration of the compound.

5 . The method of any one of claims 1 to 3 , wherein the subject is evaluated for the presence of an elevated level of 2HG prior to administration of the compound.

6 . The method of any one of claims 1 to 3 , wherein efficacy of treatment of cancer comprises monitoring the level of 2HG in a subject during treatment.

7 . The method of any one of claims 1 to 3 , wherein efficacy of treatment of cancer comprises monitoring the level of 2HG in a subject following termination of treatment.

8 . (canceled)

9 . A compound of formula (Ic):

W, X, Y and Z are each independently selected from CH or N;

B and B 1 are independently selected from hydrogen, alkyl or when taken together with the carbon to which they are attached form a carbonyl group;

D and D 1 are independently selected from a bond or NR c ;

A is aryl or heteroaryl, each substituted with 0-3 occurrences of R 2 ;

R 1 is independently selected from acyl, cycloalkyl, aryl, heteroaryl, heterocyclyl, heterocyclylalkyl, cycloalkylalkyl, aralkyl, and heteroaralkyl; each of which may be optionally substituted with 0-3 occurrences of R d ;

each R 2 is independently selected from halo, hydroxy, haloalkyl, aryl, heteroaryl, alkyl, —NR c R c′ , alkyl-NR c R c′ , —OR a , —C(O)OH, —C(O)OR b , or —C(O)NR c R c′ ;

each R 3 is independently selected from halo, haloalkyl, alkyl, alkenyl, alkynyl, heterocyclyl and —OR a , or two adjacent R 3 s (when n is 2) taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl;

each R a is independently selected from alkyl, alkoxy, alkylalkoxy, alkylalkoxylalkoxy, alkyl-C(O)OR b , alkyl-C(O)OR b , and haloalkyl;

each R b is independently alkyl;

each R c and R c′ is independently selected from hydrogen, alkyl, alkyl-C(O)OR b and alkenyl;

each R d is independently selected from halo, haloalkyl, alkyl, nitro, cyano, and —OR a , or two R d taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl;

n is 0, 1, or 2;

h is 0, 1, 2; and

g is 0, 1 or 2;

provided that:

(1) when W, X, Y and Z are each independently selected from CH;

B and B 1 taken together with the carbon to which they are attached form a carbonyl group;

each R 3 is independently selected from halo, alkyl and —OR a ;

(i) h and g are each 1; one of D and D 1 is a bond and the other is NH; R 1 is phenyl or monocyclic heteroaryl, each of which may be optionally substituted with 0-3 occurrences of R d ;

then A is not phenyl optionally substituted with unsubstituted alkyl, unsubstituted alkoxy, halo, CF 3 , CH 2 CH 2 NH 2 , NO 2 , or acyl;

(ii) h and g are each 1; of D and D 1 is a bond and the other is NH; R 1 is acyl;

then n is 1, R 3 is alkyl and R 3 is connected to W, and A is not phenyl substituted by methyl, F, methoxy or ethoxy; and

(iii) the sum of h and g is 3, D is a bond and D 1 is NH; R 1 is o-methoxyphenyl;

then A is not phenyl substituted with unsubstituted alkyl, methoxy, ethoxy or halo;

(2) the compound is not N-(4-butylphenyl)-N′-[3-[[4-2-(methoxyphenyl)-1-piperazinyl]carbonyl]-4-methylphenyl]-sulfamide.

10 . The compound of claim 9 , wherein the compound is a compound of formula (II):

wherein:

B and B 1 are independently selected from hydrogen, alkyl or when taken together with the carbon to which they are attached form a carbonyl group;

D and D 1 are independently selected from a bond or NR c ;

A is aryl or heteroaryl, each substituted with 0-3 occurrences of R 2 ;

R 1 is independently selected from cycloalkyl, aryl, heteroaryl or heterocyclyl; each of which may be optionally substituted with 0-3 occurrences of R d ;

each R 2 is independently selected from halo, hydroxy, haloalkyl, aryl, heteroaryl, alkyl, —NR c R c′ , alkyl-NR c R c′ , —OR a , —C(O)OH, —C(O)OR b , or —C(O)NR c R c′ ;

each R 3 is independently selected from halo, haloalkyl, alkyl and —OR a , or two adjacent R 3 s (when n is 2) taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl;

each R a is independently selected from alkyl, alkoxy, alkylalkoxy, alkylalkoxylalkoxy, alkyl-C(O)OR b , alkyl-C(O)OR b , and haloalkyl; each R c and R c′ is independently selected from hydrogen, alkyl, alkyl-C(O)OR b and alkenyl;

each R b is independently alkyl;

each R d is independently selected from halo, haloalkyl, alkyl, nitro, cyano, and —OR a , or two R d taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl;

n is 0, 1, or 2; and

provided that when B and B 1 taken together with the carbon to which they are attached form a carbonyl group;

each R 3 is independently selected from halo, alkyl and —OR a ;

one of D and D 1 is a bond and the other is NH; and

R 1 is phenyl or monocyclic heteroaryl, each of which may be optionally substituted with 0-3 occurrences of R d ;

then A is not phenyl optionally substituted with unsubstituted alkyl, unsubstituted alkoxy, halo, CF 3 , CH 2 CH 2 NH 2 , NO 2 , or acyl.

11 . The compound of claim 9 , wherein the compound is a compound of formula (III):

wherein:

B and B 1 are independently selected from hydrogen, alkyl or when taken together with the carbon to which they are attached form a carbonyl group;

D and D 1 are independently selected from a bond or NR c ;

A is aryl or heteroaryl, each substituted with 0-3 occurrences of R 2 ;

R 1 is independently selected from acyl, optionally substituted with 0-3 occurrences of R d ;

each R 2 is independently selected from halo, hydroxy, haloalkyl, aryl, heteroaryl, alkyl, —NR c R c′ , alkyl-NR c R c′ , —OR a , —C(O)OH, —C(O)OR b , or —C(O)NR c R c′ ;

R 3 is halo, haloalkyl, alkyl, or —OR a ;

each R a is independently selected from alkyl and haloalkyl;each R c and R c′ is independently selected from hydrogen, alkyl, and alkenyl;

each R b is independently alkyl;

each R d is independently selected from halo, haloalkyl, alkyl, nitro, cyano, and —OR a , or two R d taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl; and

provided that when B and B 1 taken together with the carbon to which they are attached form a carbonyl group; D and D 1 is a bond and the other is NH;

then A is not phenyl substituted by methyl, fluorine, methoxy or ethoxy.

12 . The compound of claim 11 , wherein B and B 1 are taken together with the carbon atoms to which they are attached to form a carbonyl group.

13 . The compound of claim 11 , wherein D is a bond and D 1 is NR c .

14 . The compound of claim 9 , wherein the compound is a compound of formula (IV):

wherein:

D and D 1 are independently selected from a bond or NR c ;

A is aryl or heteroaryl, each substituted with 0-3 occurrences of R 2 ;

R 1 is independently selected from heterocyclylalkyl, cycloalkylalkyl, aralkyl and heteroaralkyl; each of which may be optionally substituted with 0-3 occurrences of R d ;

each R 2 is independently selected from halo, hydroxy, haloalkyl, aryl, heteroaryl, alkyl, —NR c R c′ , alkyl-NR c R c′ , —OR a , —C(O)OH, —C(O)OR b , or —C(O)NR c R c′ ;

R 3 is alkyl;

each R a is independently selected from alkyl and haloalkyl; each R c and R c′ is independently selected from hydrogen, alkyl, and alkenyl;

each R b is independently alkyl;

each R d is independently selected from halo, haloalkyl, alkyl, nitro, cyano, and —OR a , or two R d taken together with the carbon atoms to which they are attached form an optionally substituted heterocyclyl; and

provided that when D is a bond and D 1 is NH, then A is not phenyl substituted with methyl or methoxy.

15 . The compound of claim 14 , wherein D is a bond and D 1 is NR c .

16 . The compound of claim 15 , wherein R c is hydrogen.

17 . The compound of claim 14 , wherein R 1 is aralkyl or heteroaralkyl substituted with 0-3 occurrences of R d .

18 . The compound of claim 14 , wherein A is phenyl substituted with 0-3 occurrences of R 2 .

Assignments (5)
CORRECTIVE ASSIGNMENT TO CORRECT THE ASSIGNEE NAME SERVIER PHARMACEUTICALS LLC BY REMOVAL OF COMMA AND UPDATING ZIP CODE TO 02210 PREVIOUSLY RECORDED ON REEL 056224 FRAME 0921. ASSIGNOR(S) HEREBY CONFIRMS THE CORRECTIVE ASSIGNMENT. Recorded Oct 28, 2021
From: AGIOS PHARMACEUTICALS, INC.
To: SERVIER PHARMACEUTICALS LLC
Reel/Frame 057970/0314 →
CORRECTIVE ASSIGNMENT TO CORRECT THE APPLICATION NO. 10,172,864 TO THE CORRECT APP NO. 61/160,253 PREVIOUSLY RECORDED ON REEL 056179 FRAME 0417. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded May 12, 2021
From: AGIOS PHARMACEUTICALS, INC.
To: SERVIER PHARMACEUTICALS, LLC
Reel/Frame 056224/0921 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 7, 2021
From: AGIOS PHARMACEUTICALS, INC.
To: SERVIER PHARMACEUTICALS, LLC
Reel/Frame 056179/0417 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 12, 2012
From: SAUNDERS, JEFFREY O.; SALITURO, FRANCESCO G.
To: AGIOS PHARMACEUTICALS, INC
Reel/Frame 029122/0396 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Aug 21, 2012
From: SAUNDERS, JEFFREY O.; SALITURO, FRANCESCO G.
To: AGIOS PHARMACEUTICALS, INC
Reel/Frame 028821/0742 →