IP Library Granted Patent US 9,593,109
Granted Patent B2
US 9,593,109 · App. 13/594,598 · Granted Mar 14, 2017

Bicyclic agonists of GPR131 and uses thereof

Inventors: Jiangao Song (Sunnyvale, CA); Phuongly Pham (San Francisco, CA); Jingyuan Ma (Sunnyvale, CA); Aaron Robert Novack (San Jose, CA); Imad Nashashibi (San Jose, CA); David W. G. Wone (Newark, CA); Dong-Fang Shi (Fremont, CA); Xin Chen (San Ramon, CA)
Assignee: CYMABAY THERAPEUTICS, INC.
C07D471/04C07D473/04C07D498/04
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Quick Facts
Patent No.
US 9,593,109
App. No.
13/594,598
Granted
Mar 14, 2017
Kind
B2
Abstract

The present disclosure relates to compounds that act as agonists of, or otherwise modulate the activity of, GPR131 and to their use in the treatment of various diseases. In particular embodiments, the structure of the compounds is given by Formula I: wherein the variables are as described herein. Related compositions, formulations and methods for the preparation of compounds of formula I are also described.

Claims (134)

1. A compound of formula (I)

or a derivative thereof, wherein

A is an optionally substituted aryl or heteroaryl;

D 1 and D 2 are each independently C or N; and D 3 , D 4 , and D 5 are each independently CR 2 , N, NR 8 , or O, wherein D 1 , D 2 , D 3 , D 4 , and D 5 together form Het 2 , which is an optionally substituted 5-membered heteroaryl;

E is alkyl, aryl, arylalkyl, cycloalkyl, heteroalkyl, heteroaryl, or heterocycloalkyl, each of which may be optionally substituted,

is selected from the group consisting of

and

R 2 is independently H, alkoxy, optionally substituted C 1-6 alkyl, amido, amino, cyano, halo, hydroxyl, sulfonyl, or sulfonamido; and

R 8 is H or optionally substituted C 1-6 alkyl.

2. The compound of claim 1 , wherein A is an optionally substituted phenyl or heteroaryl.

3. The compound of claim 2 , wherein A is phenyl optionally substituted with one or more substituents selected from the group consisting of alkoxy, amido, amino, an optionally substituted C 1-6 alkyl, carboxylate, cyano, halo, and hydroxyl.

4. The compound of claim 1 , wherein Het 2 is selected from the group consisting of imidazole, triazole and tetrazole.

5. The compound of claim 1 , wherein D 2 is carbon.

6. The compound of claim 1 , wherein E is an optionally substituted aryl or heteroaryl.

7. A compound represented by Formula (Ib2)

or a derivative thereof, wherein

A is an optionally substituted aryl or heteroaryl;

D 4 and D 5 are each independently CR 2 , or N, wherein D 4 and D 5 together with the two nitrogen attached thereto Het 2 , which is an optionally substituted 5-membered heteroaryl;

E is aryl, cycloalkyl, heteroalkyl, heteroaryl, or heterocycloalkyl, each of which may be optionally substituted, or E is an unsubstituted alkyl; and

R 2 is independently H, alkoxy, optionally substituted C 1-6 alkyl, amido, amino, cyano, halo, hydroxyl, sulfonyl, or sulfonamido.

8. A compound represented by Formula (Ib3)

or a derivative thereof, wherein

A is an optionally substituted aryl or heteroaryl;

D 3 and D 5 are each independently CR 2 or N, wherein D 3 and D 5 together with the two nitrogen attached thereto Het 2 , which is an optionally substituted 5-membered heteroaryl;

E is aryl, cycloalkyl, heteroalkyl, heteroaryl, or heterocycloalkyl, each of which may be optionally substituted, or E is an unsubstituted alkyl; and

R 2 is independently H, alkoxy, optionally substituted C 1-6 alkyl, amido, amino, cyano, halo, hydroxyl, sulfonyl, or sulfonamido.

9. A compound selected from the group consisting of:

2-(2-Chlorophenyl)-3-(1-(4-chlorophenyl)-1H-tetrazol-5-yl)imidazo[1,2-a]pyridine;

2-(2-Chlorophenyl)-3-(4-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

3-(4-Cyclohexyl-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(2-Chlorophenyl)-3-(1-(4-chlorophenyl)-1H-1,2,4-triazol-5-yl)imidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-3-methyl-1H-1,2,4-triazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(4-(4-Chlorophenyl)-5-methyl-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-imidazol-2-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-imidazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(pyridin-4-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-isopropyl-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-N,N-dimethylaniline;

4-(4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)phenyl)morpholine;

2-(2,5-Dichlorophenyl)-3-(4-(4-(methylsulfonyl)phenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(4-(trifluoromethyl)phenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

5-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1H-indazole;

4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)benzonitrile;

6-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1H-indazole;

6-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1-methyl-1H-benzo[d]imidazole;

5-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)benzo[d]thiazole;

5-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1-methyl-1H-indazole;

6-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1-methyl-1H-indazole;

5-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1-methyl-1H-benzo[d]imidazole;

6-(3-(2-(2-Chlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1H-indazole;

3-(4-(1H-Indazol-6-yl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-b]pyridazine;

3-(4-(4-Chlorophenyl)-4H-1,2,4-triazol-3-yl)-2-(4-fluorophenyl)pyrazolo[1,5-a]pyridine;

4-(4-Chlorophenyl)-3-(2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-1H-1,2,4-triazol-5 (4H)-one;

4-(4-Chlorophenyl)-3-(2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-1H-1,2,4-triazole-5 (4H)-thione;

3-(4-(4-Chlorophenyl)-5-methoxy-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(4-(4-Chlorophenyl)-5-(methylthio)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(4-ethylphenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(4-isopropylphenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

3-(4-([1,1′-Biphenyl]-4-yl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

Ethyl 4-(3-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine-3-yl)-4H-1,2,4-triazol-4-yl)benzoate;

2-(2,5-Dichlorophenyl)-3-(4-(4-fluorophenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(2-fluorophenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(3-fluorophenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(1-methyl-1H-indol-5-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(4-(4-(3-(trifluoromethyl)-1H-pyrazol-1-yl)phenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridine-3-yl)-4H-1,2,4-triazol-4-yl)-3,5-dimethylisoxazole;

N-(4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)phenyl)-N-methylacetamide;

2-(2,5-Dichlorophenyl)-3-(4-(6-methylpyridin-3-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

6-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)quinoline;

N-(2-Chloro-4-(3-(2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)phenyl)acetamide;

3-(4-(4-Chlorobenzyl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1H-indazole;

4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1-methyl-1H-indazole;

2-(2,5-Dichlorophenyl)-3-(4-(4-(4-methylpiperazin-1-yl)phenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

4-(3-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridine-3-yl)-4H-1,2,4-triazol-4-yl)-N,N-dimethylbenzamide;

4-(3-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridine-3-yl)-4H-1,2,4-triazol-4-yl)benzoic acid;

2-(2-Chloro-5-fluorophenyl)-3-(1-(4-chlorophenyl)-1H-tetrazol-5-yl)imidazo[1,2-a]pyrimidine;

2-(2-Chloro-5-fluorophenyl)-3-(1-(4-chlorophenyl)-1H-tetrazol-5-yl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyrimidine;

5-(1-(4-Chlorophenyl)-1H-tetrazol-5-yl)-6-(2,5-dichlorophenyl)imidazo[2,1-b]oxazole;

3-(1-(4-Chlorophenyl)-1H-tetrazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(4-(4-Chlorophenyl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-1,2,4-triazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-tetrazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-b]pyridazine;

3-(1-(4-Chlorophenyl)-1H-tetrazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyrazine;

2-(2-Chlorophenyl)-3-(1-(4-chlorophenyl)-1H-imidazol-2-yl)imidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-tetrazol-5-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyrimidine;

3-(1-(4-Chlorophenyl)-1H-tetrazol-5-yl)-2-(2,5-dichlorophenyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-imidazol-2-yl)-2-(2,5-dichlorophenyl)-5,6,7,8-tetrahydroimidazo[1,2-a]pyridine;

3-(1-(4-Chlorophenyl)-1H-imidazol-2-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-b]pyridazine;

2-(2,5-Dichlorophenyl)-3-(1-(4-(trifluoromethyl)phenyl)-1H-tetrazol-5-yl)imidazo[1,2-a]pyridine;

2-(2,5-Dichlorophenyl)-3-(1-(4-(trifluoromethyl)phenyl)-1H-tetrazol-5-yl)imidazo[1,2-b]pyridazine;

2-(2, 5-Dichlorophenyl)-3-(1-(4-(trifluoromethyl)phenyl)-1H-imidazol-2-yl)imidazo[1,2-a]pyridine;

2-(2, 5-Dichlorophenyl)-3-(1-(4-(trifluoromethyl)phenyl)-1H-imidazol-2-yl)imidazo[1,2-b]pyridazine;

4-(5-(2-(2, 5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-1H-tetrazol-1-yl)benzonitrile;

4-(2-(2-(2,5-Dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-1H-imidazol-1-yl)benzonitrile;

6-(3-(2-(3-Chlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1H-indazole;

3-(4-(4-chloro-3-(trifluoromethyl)phenyl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(2, 5-dichlorophenyl)-3-(4-(1-methyl-1H-indol-6-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

6-chloro-3-(3-(2-(2, 5-dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-1-methyl-1H-indazole;

2-(2, 5-dichlorophenyl)-3-(4-(5-methylpyridin-2-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2, 5-dichlorophenyl)-3-(4-(pyrimidin-5-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

2-(2, 5-dichlorophenyl)-3-(4-(4-(pyrrolidin-1-yl)phenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

4-(2-(2-(2,5-dichlorophenyl)imidazo[1,2-b]pyridazin-3-yl)-1H-imidazol-1-yl)benzonitrile;

3-(5-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)-2-(2, 5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(2, 5-dichlorophenyl)-3-(4-(1-methylindolin-5-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

5-(3-(2-(2, 5-dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)-N,N-dimethylpyridin-2-amine;

5-(3-(2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)picolinonitrile;

3-(4-(benzofuran-5-yl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(2,5-dichlorophenyl)-3-(4-(2,3-dihydrobenzofuran-5-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

4-(3-(2-(4-chlorophenyl)pyrazolo[1,5-a]pyridin-3-yl)-4H-1,2,4-triazol-4-yl)benzonitrile;

3-(3-(4-chlorophenyl)-4H-1,2,4-triazol-4-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

4-(3-(2-(4-chlorophenyl)pyrazolo[1,5-b]pyridazin-3-yl)-4H-1,2,4-triazol-4-yl)benzonitrile;

3-(4-(7-chloro-2-methylbenzofuran-5-yl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)imidazo[1,2-a]pyridine;

2-(4-chlorophenyl)-3-(4-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)pyrazolo[1,5-b]pyridazine;

2-(2-chlorophenyl)-3-(4-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-b]pyridazine;

3-(4-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)-2-(2-fluoro-5-methylphenyl)imidazo[1,2-a]pyridine;

4-(3-(2-(2-chlorophenyl)imidazo[1,2-b]pyridazin-3-yl)-4H-1,2,4-triazol-4-yl)benzonitrile;

3-(4-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dimethylphenyl)imidazo[1,2-a]pyridine;

2-(2,5-dichlorophenyl)-3-(4-(2-methylbenzofuran-5-yl)-4H-1,2,4-triazol-3-yl)imidazo[1,2-a]pyridine;

3-(4-(4-chlorophenyl)-4H-1,2,4-triazol-3-yl)-2-(2,5-dichlorophenyl)-4,5,6,7-tetrahydro-2H-indazole;

4-(3-(2-(2,5-dichlorophenyl)-4,5,6,7-tetrahydro-2H-indazol-3-yl)-4H-1,2,4-triazol-4-yl)benzonitrile; and

4-(3-(2-(2,5-dichlorophenyl)pyrazolo[1,5-b]pyridazin-3-yl)-4H-1,2,4-triazol-4-yl)benzonitrile,

or a salt, racemate, or a tautomer thereof.

10. A pharmaceutical composition comprising a compound of claim 1 and a pharmaceutically acceptable carrier.

11. The compound of claim 1 , wherein the derivative is a pharmaceutically acceptable salt or a tautomer.

12. A pharmaceutical composition comprising a compound of claim 9 and a pharmaceutically acceptable carrier.

13. The compound of claim 1 , wherein

14. The compound of claim 1 , wherein

15. The compound of claim 1 , wherein

16. The compound of claim 1 , wherein

17. The compound of claim 1 , wherein

18. The compound of claim 1 , wherein

19. A pharmaceutical composition comprising a compound of claim 7 and a pharmaceutically acceptable carrier.

20. A pharmaceutical composition comprising a compound of claim 8 and a pharmaceutically acceptable carrier.

Assignments (4)
RELEASE OF SECURITY INTEREST Recorded Aug 7, 2015
From: SILICON VALLEY BANK; OXFORD FINANCE LLC
To: CYMABAY THERAPEUTICS, INC.
Reel/Frame 036307/0406 →
SECURITY AGREEMENT Recorded Nov 22, 2013
From: CYMABAY THERAPEUTICS, INC.
To: SILICON VALLEY BANK; OXFORD FINANCE LLC
Reel/Frame 031710/0508 →
CHANGE OF NAME Recorded Oct 22, 2013
From: METABOLEX, INC.
To: CYMABAY THERAPEUTICS, INC.
Reel/Frame 031475/0472 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Nov 13, 2012
From: SONG, JIANGAO; PHAM, PHUONGLY; MA, JINGYUAN; NOVACK, AARON ROBERT; NASHASHIBI, IMAD; WONE, DAVID W.G.; SHI, DONG-FANG; CHEN, XIN
To: METABOLEX, INC.
Reel/Frame 029286/0889 →
Continuity (2)
Provisional Application 61528067 · Aug 26, 2011
Related Publication 20130059845A1 · Mar 7, 2013