Mutant Δ-5 desaturases mutated in the heme-binding motif (HPGG)
View Patent ↗The present invention relates to mutant Δ5 desaturases, which have the ability to convert dihomo-γ-linolenic acid [DGLA; 20:3 ω-6] to arachidonic acid [ARA; 20:4 ω-6] and/or eicosatetraenoic acid [ETA; 20:4 ω-3] to eicosapentaenoic acid [EPA; 20:5 ω-3] and which possess at least one mutation within the HPGG motif of the cytochome b 5 -like domain. Isolated nucleic acid fragments and recombinant constructs comprising such fragments encoding Δ5 desaturases, along with a method of making long chain polyunsaturated fatty acids [“PUFAs”] using these mutant Δ5 desaturases in oleaginous yeast, are disclosed.
1. An isolated nucleic acid molecule comprising a nucleotide sequence encoding a Euglena anabaena delta-5 desaturase mutant polypeptide wherein the mutant polypeptide comprises an amino acid sequence that has at least 95% amino acid sequence identity with the amino acid sequence of SEQ ID NO:12, wherein the amino acid sequence of the mutant polypeptide has Cys, Trp, or Ala at the position corresponding to amino acid 35 of SEQ ID NO:12, and wherein said mutant polypeptide has delta-5 desaturase enzymatic activity.
2. A microbial host cell transformed with the isolated nucleic acid molecule of claim 1 .
3. The microbial host cell of claim 2 selected from the group consisting of: bacteria, yeasts, algae, euglenoids, stramenopiles, oomycetes and fungi.
4. The microbial host cell of claim 3 wherein the microbial host cell is an oleaginous yeast.
5. The microbial host cell of claim 4 wherein the oleaginous yeast is selected from the group consisting of: Yarrowia, Candida, Rhodotorula, Rhodosporidium, Cryptococcus, Trichosporon and Lipomyces.
6. A method for producing arachidonic acid comprising growing the microbial host cell according to claim 2 in the presence of dihomo-gamma-linolenic acid, wherein the dihomo-gamma-linolenic acid is converted to arachidonic acid.
7. A method for producing eicosapentaenoic acid comprising growing the microbial host cell according to claim 2 in the presence of eicosatetraenoic acid, wherein the eicosatetraenoic acid is converted to eicosapentaenoic acid.
8. The microbial host cell of claim 2 wherein the microbial host cell is an oleaginous bacterium, yeast, algae, euglenoid, stramenopile, oomycete or fungus and produces a polyunsaturated fatty acid selected from the group consisting of omega-6 fatty acids and omega-3 fatty acids.
9. The isolated nucleic acid molecule of claim 1 , wherein the amino acid sequence of the mutant polypeptide has Cys or Ala at the position corresponding to amino acid 35 of SEQ ID NO:12, and wherein the mutant polypeptide has a dihomo-gamma-linolenic acid to arachidonic acid conversion efficiency that is greater than the dihomo-gamma-linolenic acid to arachidonic acid conversion efficiency of a wild type Euglena anabaena delta-5 desaturase polypeptide comprising the heme-binding motif of SEQ ID NO:180 (HPGG).
10. The isolated nucleic acid molecule of claim 1 , wherein said mutant polypeptide comprises the amino acid sequence of SEQ ID NO:139.
11. The isolated nucleic acid of claim 10 , wherein said nucleotide sequence encoding a Euglena anabaena delta-5 desaturase mutant polypeptide is SEQ ID NO:193.
12. The isolated nucleic acid molecule of claim 1 , wherein the amino acid sequence of the mutant polypeptide has Ala at the position corresponding to amino acid 35 of SEQ ID NO:12.
13. The microbial host cell of claim 5 , wherein the oleaginous yeast is Yarrowia lipolytica.