IP Library Granted Patent US 9,458,231
Granted Patent B2
US 9,458,231 · App. 13/819,935 · Granted Oct 4, 2016

Modulators and methods of use

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Quick Facts
Patent No.
US 9,458,231
App. No.
13/819,935
Granted
Oct 4, 2016
Kind
B2
Abstract

Novel modulators, including antibodies and derivatives thereof, and methods of using such modulators to treat hyperproliferative disorders are provided.

Claims (51)

1. An isolated anti-CD46 antibody or immunoreactive fragment thereof, wherein the antibody or immunoreactive fragment thereof is selected from the group consisting of:

a) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 15 for CDR-H1, residues 50-65 of SEQ ID NO: 15 for CDR-H2, and residues 95-102 of SEQ ID NO: 15 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 17 for CDR-L1, residues 50-56 of SEQ ID NO: 17 for CDR-L2 and residues 89-97 of SEQ ID NO: 17 for CDR-L3, wherein the residues are numbered according to Kabat;

b) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 19 for CDR-H1, residues 50-65 of SEQ ID NO: 19 for CDR-H2, and residues 95-102 of SEQ ID NO: 19 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 21 for CDR-L1, residues 50-56 of SEQ ID NO: 21 for CDR-L2 and residues 89-97 of SEQ ID NO: 21 for CDR-L3, wherein the residues are numbered according to Kabat;

c) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 23 for CDR-H1, residues 50-65 of SEQ ID NO: 23 for CDR-H2, and residues 95-102 of SEQ ID NO: 23 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 25 for CDR-L1, residues 50-56 of SEQ ID NO: 25 for CDR-L2 and residues 89-97 of SEQ ID NO: 25 for CDR-L3, wherein the residues are numbered according to Kabat;

d) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 27 for CDR-H1, residues 50-65 of SEQ ID NO: 27 for CDR-H2, and residues 95-102 of SEQ ID NO: 27 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 29 for CDR-L1, residues 50-56 of SEQ ID NO: 29 for CDR-L2 and residues 89-97 of SEQ ID NO: 29 for CDR-L3, wherein the residues are numbered according to Kabat;

e) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of the polypeptide encoded by the polynucleotide set forth as SEQ ID NO: 30 for CDR-H1, residues 50-65 of the polypeptide encoded by the polynucleotide set forth as SEQ ID NO: 30 for CDR-H2, and residues 95-102 of the polypeptide encoded by the polynucleotide set forth as SEQ ID NO: 30 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 33 for CDR-L1, residues 50-56 of SEQ ID NO: 33 for CDR-L2 and residues 89-97 of SEQ ID NO: 33 for CDR-L3, wherein the residues are numbered according to Kabat;

f) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 35 for CDR-H1, residues 50-65 of SEQ ID NO: 35 for CDR-H2, and residues 95-102 of SEQ ID NO: 35 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 37 for CDR-L1, residues 50-56 of SEQ ID NO: 37 for CDR-L2 and residues 89-97 of SEQ ID NO: 37 for CDR-L3, wherein the residues are numbered according to Kabat;

g) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 39 for CDR-H1, residues 50-65 of SEQ ID NO: 39 for CDR-H2, and residues 95-102 of SEQ ID NO: 39 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 41 for CDR-L1, residues 50-56 of SEQ ID NO: 41 for CDR-L2 and residues 89-97 of SEQ ID NO: 41 for CDR-L3, wherein the residues are numbered according to Kabat;

h) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 43 for CDR-H1, residues 50-65 of SEQ ID NO: 43 for CDR-H2, and residues 95-102 of SEQ ID NO: 43 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 45 for CDR-L1, residues 50-56 of SEQ ID NO: 45 for CDR-L2 and residues 89-97 of SEQ ID NO: 45 for CDR-L3, wherein the residues are numbered according to Kabat;

i) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 47 for CDR-H1, residues 50-65 of SEQ ID NO: 47 for CDR-H2, and residues 95-102 of SEQ ID NO: 47 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 49 for CDR-L1, residues 50-56 of SEQ ID NO: 49 for CDR-L2 and residues 89-97 of SEQ ID NO: 49 for CDR-L3, wherein the residues are numbered according to Kabat;

j) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 51 for CDR-H1, residues 50-65 of SEQ ID NO: 51 for CDR-H2, and residues 95-102 of SEQ ID NO: 51 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 53 for CDR-L1, residues 50-56 of SEQ ID NO: 53 for CDR-L2 and residues 89-97 of SEQ ID NO: 53 for CDR-L3, wherein the residues are numbered according to Kabat;

k) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 55 for CDR-H1, residues 50-65 of SEQ ID NO: 55 for CDR-H2, and residues 95-102 of SEQ ID NO: 55 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 57 for CDR-L1, residues 50-56 of SEQ ID NO: 57 for CDR-L2 and residues 89-97 of SEQ ID NO: 57 for CDR-L3, wherein the residues are numbered according to Kabat;

l) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 59 for CDR-H1, residues 50-65 of SEQ ID NO: 59 for CDR-H2, and residues 95-102 of SEQ ID NO: 59 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 61 for CDR-L1, residues 50-56 of SEQ ID NO: 61 for CDR-L2 and residues 89-97 of SEQ ID NO: 61 for CDR-L3, wherein the residues are numbered according to Kabat;

m) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 63 for CDR-H1, residues 50-65 of SEQ ID NO: 63 for CDR-H2, and residues 95-102 of SEQ ID NO: 63 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 65 for CDR-L1, residues 50-56 of SEQ ID NO: 65 for CDR-L2 and residues 89-97 of SEQ ID NO: 65 for CDR-L3, wherein the residues are numbered according to Kabat;

n) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 67 for CDR-H1, residues 50-65 of SEQ ID NO: 67 for CDR-H2, and residues 95-102 of SEQ ID NO: 67 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 69 for CDR-L1, residues 50-56 of SEQ ID NO: 69 for CDR-L2 and residues 89-97 of SEQ ID NO: 69 for CDR-L3, wherein the residues are numbered according to Kabat;

o) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 71 for CDR-H1, residues 50-65 of SEQ ID NO: 71 for CDR-H2, and residues 95-102 of SEQ ID NO: 71 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 73 for CDR-L1, residues 50-56 of SEQ ID NO: 73 for CDR-L2 and residues 89-97 of SEQ ID NO: 73 for CDR-L3, wherein the residues are numbered according to Kabat;

p) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 75 for CDR-H1, residues 50-65 of SEQ ID NO: 75 for CDR-H2, and residues 95-102 of SEQ ID NO: 75 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 77 for CDR-L1, residues 50-56 of SEQ ID NO: 77 for CDR-L2 and residues 89-97 of SEQ ID NO: 77 for CDR-L3, wherein the residues are numbered according to Kabat;

q) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 79 for CDR-H1, residues 50-65 of SEQ ID NO: 79 for CDR-H2, and residues 95-102 of SEQ ID NO: 79 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 81 for CDR-L1, residues 50-56 of SEQ ID NO: 81 for CDR-L2 and residues 89-97 of SEQ ID NO: 81 for CDR-L3, wherein the residues are numbered according to Kabat;

r) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 83 for CDR-H1, residues 50-65 of SEQ ID NO: 83 for CDR-H2, and residues 95-102 of SEQ ID NO: 83 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 85 for CDR-L1, residues 50-56 of SEQ ID NO: 85 for CDR-L2 and residues 89-97 of SEQ ID NO: 85 for CDR-L3, wherein the residues are numbered according to Kabat;

s) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 199 for CDR-H1, residues 50-65 of SEQ ID NO: 199 for CDR-H2, and residues 95-102 of SEQ ID NO: 199 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 201 for CDR-L1, residues 50-56 of SEQ ID NO: 201 for CDR-L2 and residues 89-97 of SEQ ID NO: 201 for CDR-L3, wherein the residues are numbered according to Kabat; and

t) an antibody comprising three heavy chain complementarity determining regions set forth as residues 31-35 of SEQ ID NO: 203 for CDR-H1, residues 50-65 of SEQ ID NO: 203 for CDR-H2, and residues 95-102 of SEQ ID NO: 203 for CDR-H3, and comprising three light chain complementarity determining regions set forth as residues 24-34 of SEQ ID NO: 205 for CDR-L1, residues 50-56 of SEQ ID NO: 205 for CDR-L2 and residues 89-97 of SEQ ID NO: 205 for CDR-L3, wherein the residues are numbered according to Kabat.

2. The isolated anti-CD46 antibody or immunoreactive fragment thereof according to claim 1 , wherein the antibody or immunoreactive fragment thereof is selected from the group consisting of:

a) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 15, and comprising a light chain variable region set forth as SEQ ID NO: 17;

b) an antibody comprising a heavy chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 18, and comprising a light chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 20;

c) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 23, and comprising a light chain variable region set forth as SEQ ID NO: 25;

d) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 27, and comprising a light chain variable region set forth as SEQ ID NO: 29;

e) an antibody comprising a heavy chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 30, and comprising a light chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 32;

f) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 35, and comprising a light chain variable region set forth as SEQ ID NO: 37;

g) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 39, and comprising a light chain variable region set forth as SEQ ID NO: 41;

h) an antibody comprising a heavy chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 42, and comprising a light chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 44;

i) an antibody comprising a heavy chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 46, and comprising a light chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 48;

j) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 51, and comprising a light chain variable region set forth as SEQ ID NO: 53;

k) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 55, and comprising a light chain variable region set forth as SEQ ID NO: 57;

l) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 59, and comprising a light chain variable region set forth as SEQ ID NO: 61;

m) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 63, and comprising a light chain variable region set forth as SEQ ID NO: 65;

n) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 67, and comprising a light chain variable region set forth as SEQ ID NO: 69;

o) an antibody comprising a heavy chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 70, and comprising a light chain variable region encoded by the polynucleotide set forth as set forth as SEQ ID NO: 72;

p) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 75, and comprising a light chain variable region set forth as SEQ ID NO: 77;

q) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 79, and comprising a light chain variable region set forth as SEQ ID NO: 81

r) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 83, and comprising a light chain variable region set forth as SEQ ID NO: 85;

s) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 199, and comprising a light chain variable region set forth as SEQ ID NO: 201; and

t) an antibody comprising a heavy chain variable region set forth as SEQ ID NO: 203, and comprising a light chain variable region set forth as SEQ ID NO: 205.

3. The isolated anti-CD46 antibody or immunoreactive fragment thereof according to claim 1 , wherein the isolated anti-CD46 antibody or immunoreactive fragment thereof is selected from the group consisting of monoclonal antibodies, chimeric antibodies, CDR-grafted antibodies, and humanized antibodies.

4. An isolated anti-CD46 antibody or immunoreactive fragment thereof comprising a heavy chain variable region set forth as SEQ ID NO: 199, and comprising a light chain variable region set forth as SEQ ID NO: 201.

5. An isolated anti-CD46 antibody or immunoreactive fragment thereof comprising a heavy chain variable region set forth as SEQ ID NO: 203, and comprising a light chain variable region set forth as SEQ ID NO: 205.

6. The isolated anti-CD46 antibody or immunoreactive fragment thereof according to claim 1 , wherein the isolated anti-CD46 antibody or immunoreactive fragment thereof is conjugated to a cytotoxic agent and optionally comprises a pharmaceutically acceptable carrier.

7. The isolated anti-CD46 antibody or immunoreactive fragment thereof according to claim 2 , wherein the isolated anti-CD46 antibody or immunoreactive fragment thereof is conjugated to a cytotoxic agent and optionally comprises a pharmaceutically acceptable carrier.

8. The isolated anti-CD46 antibody or immunoreactive fragment thereof according to claim 6 , wherein the isolated anti-CD46 antibody or immunoreactive fragment thereof comprises a heavy chain variable region and light chain variable region selected from the group consisting of:

(a) a heavy chain variable region set forth as SEQ ID NO: 199, and comprising a light chain variable region set forth as SEQ ID NO: 201; and

(b) a heavy chain variable region set forth as SEQ ID NO: 203, and comprising a light chain variable region set forth as SEQ ID NO: 205.

9. A vector comprising a polynucleotide, wherein the polynucleotide encodes a polypeptide comprising a heavy chain variable region set forth as SEQ ID NO: 199 or SEQ ID NO: 203 or a light chain variable region set forth as SEQ ID NO: 201 or SEQ ID NO: 205.

Assignments (5)
MERGER Recorded Aug 7, 2016
From: STEMCENTRX, INC.
To: ABBVIE STEMCENTRX LLC
Reel/Frame 039601/0189 →
CHANGE OF NAME Recorded Apr 6, 2015
From: STEM CENTRX, INC.
To: STEMCENTRX, INC.
Reel/Frame 035375/0341 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jul 30, 2013
From: DYLLA, SCOTT J.; FOORD, ORIT; STULL, ROBERT; ANDERSON, WADE C.; OHSHIMA, SAIYOU
To: STEM CENTRX, LLC
Reel/Frame 030904/0562 →
CHANGE OF NAME Recorded Jul 30, 2013
From: STEM CENTRX, LLC
To: STEM CENTRX, INC.
Reel/Frame 030920/0270 →
CHANGE OF ADDRESS Recorded Jul 30, 2013
From: STEM CENTRX, INC.
To: STEM CENTRX, INC.
Reel/Frame 030920/0277 →