Variable focusing of electron microscopy image data utilizing origin-centered discrete fractional fourier transform
View Patent ↗Computer-implemented arrangements for adjusting the focus in original electron microscope image data are described. In an implementation, an origin-centered fractional Fourier transform operation and an origin-centered phase restoration operation, both responsive to a provided fractional power value, are collectively applied to original electron microscope image data to produce computationally-focused image data. A parameter adjuster is used to provide a range of variation of the power value, and can be adjusted by a user or under the direction of a control system. The fractional Fourier transform operation and the phase restoration operation can be realized by at least one numerical algorithm and can comprise an approximation.
1. A computer-implemented method for adjusting the focus in original electron microscope image data, the method comprising:
obtaining original electron microscope image data comprising a plurality of spatially-indexed amplitude values, and further comprising a center located relative to the plurality of spatially-indexed amplitude values;
providing a fractional power parameter associated with a fractional Fourier transform operation;
calculating approximated centered two-dimensional discrete phase restoration information responsive to the fractional power value;
calculating an approximated centered two-dimensional fractional Fourier transform operation responsive to the fractional power value;
operating on the original electron microscope image data with the approximated centered two-dimensional phase restoration information and the approximated centered two-dimensional fractional Fourier transform operation to produce computationally-focused image data;
wherein the focus plane of the computationally-focused image data is responsive to the fractional power parameter.
2. The method of claim 1 , further comprising adjusting the fractional power and operating on the original electron microscope image data with another resulting approximated centered two-dimensional phase restoration information and the approximated centered two-dimensional fractional Fourier transform operation responsive to the adjusted fractional power.
3. The method of claim 2 , the method further comprising: producing additional computationally-focused image data for the adjusted fractional power.
4. The method of claim 2 , further comprising: adjusting the fractional power in response to a user input.
5. The method of claim 2 , further comprising: adjusting the fractional power in response to an output of a control system.
6. The method of claim 1 , wherein the centered two-dimensional fractional Fourier transform comprises a numerical algorithm.
7. The method of claim 1 , wherein the centered two-dimensional fractional Fourier transform operation is approximated by any from the group of a Taylor series expansion, a Hermite function expansion, a perturbation approximation, a singular integral approximation, or an infinitesimal generator computation.
8. The method of claim 1 , wherein the original electron microscope image data represents data from a first subset of larger electron microscope image data, the method further comprising: producing additional computationally-focused image data for a second subset of the larger electron microscope image data.
9. The method of claim 1 , further storing the original electron microscope image data as a digital image.
10. The method of claim 1 , further storing the computationally-focused image data as a digital image.
11. A system for adjusting focus in original electron microscope image data, the system comprising:
a numerical centered two-dimensional phase restoration operation for approximately restoring phase information associated with the original electron microscope image data to produce computationally-focused image data, the centered two-dimensional phase restoration operation responsive to a fractional power;
a numerical centered two-dimensional fractional Fourier transform operation for applying at least one approximated centered two-dimensional fractional Fourier transform operation responsive to the fractional power;
a parameter adjuster for providing a range of variation of the at least one fractional power;
wherein the numerical centered two-dimensional phase restoration operation and numerical centered two-dimensional fractional Fourier transform operation are applied to the original electron microscope image data, resulting in computationally-focused image data.
12. The system of claim 11 , the parameter adjuster to adjust the fractional power, and the numerical centered two-dimensional fractional Fourier transform operation to operate on the original electron microscope image data with another resulting approximated centered two-dimensional fractional Fourier transform having determined by the adjusted fractional power.
13. The system of claim 12 , wherein the numerical centered two-dimensional fractional Fourier transform operation to produce additional computationally-focused image data for the adjusted fractional power.
14. The system of claim 12 , the parameter adjuster to adjust the fractional power in response to a user input.
15. The system of claim 12 , the parameter adjuster to adjust the fractional power in response to an output of a control system.
16. The system of claim 11 , wherein the parameter adjuster to adjust fractional Fourier transform comprises a numerical algorithm.
17. The system of claim 11 , wherein the centered two-dimensional fractional Fourier transform operation is approximated by any from the group of a Taylor series expansion, a Hermite function expansion, a perturbation approximation, a singular integral approximation, or an infinitesimal generator computation.
18. The system of claim 11 , wherein the original electron microscope image data represents data from a first portion of larger electron microscope image data, the system produce additional computationally-focused image data for a second portion of the larger electron microscope image data.
19. The system of claim 11 , further comprising: memory for storing the original electron microscope image data as a digital image.
20. The system of claim 1 , further comprising: memory for storing the computationally-focused image data as a digital image.