Terminally modified RNA
The invention relates to compositions and methods for the manufacture and optimization of modified mRNA molecules via optimization of their terminal architecture.
1. A method of reducing a protein antigen-mediated immune response in a subject, comprising administering to the subject a composition comprising a chemically modified mRNA and a pharmaceutically acceptable carrier, wherein the chemically modified mRNA comprises
(a) a 5′ untranslated region (5′ UTR);
(b) a region of linked nucleosides encoding said protein antigen;
(c) a 3′ untranslated region (3′ UTR) comprising at least one miR-142-3p microRNA binding site; and
(d) a 3′ tailing region of linked nucleosides,
wherein the chemically modified mRNA comprises fully modified 1-methyl pseudouridine nucleosides, and optionally comprises fully modified 5′ methyl-cytidine nucleosides, thereby reducing the protein antigen-mediated immune response in the subject.
2. The method of claim 1 , wherein the first region of linked nucleosides is codon optimized.
3. The method of claim 1 , wherein the chemically modified mRNA comprises fully modified 1-methyl pseudouridine nucleosides without fully modified 5′ methyl-cytidine nucleosides.
4. The method of claim 1 , wherein the chemically modified mRNA comprises fully modified 1-methyl pseudouridine nucleosides and fully modified 5′ methyl-cytidine nucleosides.
5. The method of claim 1 , wherein the miR-142-3p microRNA binding site comprises the sequence set forth in SEQ ID NO: 1404.
6. The method of claim 1 , wherein the 3′ tailing region of linked nucleosides comprises a poly A tail of at least 100, at least 120, or at least 140 nucleosides.
7. The method of claim 1 , wherein the chemically modified mRNA further comprises a 5′ cap structure.
8. The method of claim 7 , wherein the 5′ cap structure comprises Cap1.
9. The method of claim 1 , wherein the protein antigen is a therapeutic protein, cytokine, growth factor, antibody or fusion protein.
10. The method of claim 1 , wherein the chemically modified mRNA is formulated with a liposome, lipoplex, or lipid nanoparticle.
11. The method of claim 10 , wherein the chemically modified mRNA is formulated with a lipid nanoparticle.
12. The method of claim 11 , wherein the lipid nanoparticle comprises a cationic or ionizable lipid.
13. The method of claim 12 , wherein the cationic lipid is selected from the group consisting of DLin-MC3-DMA, DLin-DMA, C12-200 and DLin-KC2-DMA.