IP Library Granted Patent US 9,012,423
Granted Patent B2
US 9,012,423 · App. 14/048,827 · Granted Apr 21, 2015

Methods for treatment of alport syndrome

Inventors: Jeremy Duffield (Seattle, WA); Balkrishen Bhat (San Diego, CA); Deidre MacKenna (San Diego, CA)
Assignee: Regulus Therapeutics Inc.
C12N15/113A61K45/06A61K31/7088C12N2310/113C12N2310/321C12N2310/315C12N2310/3233
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Quick Facts
Patent No.
US 9,012,423
App. No.
14/048,827
Granted
Apr 21, 2015
Kind
B2
Abstract

Provided herein are methods for the treatment of Alport Syndrome, using modified oligonucleotides targeted to miR-21. In certain embodiments, a modified oligonucleotide targeted to miR-21 improves kidney function and/or reduces fibrosis in subjects having Alport Syndrome. In certain embodiments, administration of a modified oligonucleotide targeted to miR-21 delays the onset of end-stage renal disease in a subject having Alport Syndrome. In certain embodiments, a modified oligonucleotide targeted to miR-21 delays the need for dialysis or kidney transplant in a subject having Alport Syndrome.

Claims (74)

1. A method of treating Alport Syndrome comprising administering to a subject having or suspected of having Alport Syndrome a modified oligonucleotide consisting of 12 to 25 linked nucleosides, wherein the nucleobase sequence of the modified oligonucleotide is complementary to miR-21.

2. The method of claim 1 wherein the subject has been diagnosed as having Alport Syndrome prior to administering the modified oligonucleotide.

3. The method of claim 1 wherein the subject, prior to administration of the modified oligonucleotide, was determined to have an increased level of miR-21in the kidney, urine or blood of the subject.

4. The method of claim 1 , wherein the administering:

a) improves kidney function;

b) delays the onset of end stage renal disease;

c) delays time to dialysis;

d) delays time to renal transplant; and/or

e) improves life expectancy.

5. The method of claim 1 , wherein the administering:

a) reduces hematuria;

b) delays the onset of hematuria;

c) reduces proteinuria;

d) delays the onset of proteinuria;

e) reduces kidney fibrosis;

f) slows further progression of fibrosis; and/or

g) halts further progression of fibrosis.

6. The method of claim 1 , wherein the subject has a mutation selected from a mutation in the gene encoding the alpha 3 chain of type IV collagen, a mutation in the gene encoding the alpha 4 chain of type IV collagen, or a mutation in the gene encoding the alpha 5 chain of type IV collagen.

7. The method of claim 1 , wherein the subject is identified as having hematuria, and/or proteinuria.

8. The method of claim 1 , wherein the subject has reduced kidney function.

9. The method of claim 1 , wherein the subject is in need of improved kidney function.

10. The method of claim 1 , comprising:

a) measuring blood urea nitrogen in the blood of the subject;

b) measuring creatinine in the blood of the subject;

c) measuring creatinine clearance in the subject;

d) measuring proteinuria in the subject;

e) measuring albumin:creatinine ratio in the subject;

f) measuring glomerular filtration rate in the subject;

g) measuring cystatin C in the subject;

h) measuring β-trace protein (BTP) in the blood of the subject;

i) measuring 2-microglobulin in the blood of the subject;

j) measuring N-acetyl-β-D-glucosaminidase (NAG) protein in the urine of the subject;

k) measuring neutrophil gelatinase-associated lipocalin (NGAL) protein in the urine of the subject;

l) measuring kidney injury molecule-1 (KIM-1) protein in the urine of the subject;

m) measuring interleukin-18 (IL-18) protein in the urine of the subject;

n) measuring monocyte chemoattractant protein (MCP1) levels in the urine of the subject;

o) measuring connective tissue growth factor (CTGF) levels in the urine of the subject;

p) measuring collagen IV fragments in the urine of the subject;

q) measuring collagen III fragments in the urine of the subject; and/or

r) measuring podocyte protein levels in the urine of the subject, wherein the podocyte protein is selected from nephrin and podocin.

11. The method of claim 1 , wherein the administering improves one or more markers of kidney function in the subject, selected from:

a) reduced blood urea nitrogen in the subject;

b) reduced creatinine in the blood of the subject;

c) improved creatinine clearance in the subject;

d) reduced proteinuria in the subject;

e) reduced albumin:creatinine ratio in the subject;

f) improved glomerular filtration rate in the subject;

g) reduced cystatin C in the blood of the subject;

h) reduced β-trace protein (BTP) in the blood of the subject;

i) reduced 2-microglobulin (B2M) in the blood of a subject;

j) reduced NAG protein in the urine of the subject;

k) reduced NGAL protein in the urine of the subject;

l) reduced KIM-1 protein in the urine of the subject;

m) reduced IL-18 protein in the urine of the subject;

n) reduced monocyte chemoattractant protein (MCP1) levels in the urine of the subject;

o) reduced connective tissue growth factor (CTGF) levels in the urine of the subject;

p) reduced collagen IV fragments in the urine of the subject;

q) reduced collagen III fragments in the urine of the subject; and/or

r) reduced podocyte protein levels in the urine of the subject, wherein the podocyte protein is selected from nephrin and podocin.

12. The method of claim 5 , wherein the proteinuria is albuminuria.

13. The method of claim 12 , wherein the albuminuria is high normal albuminuria, microalbuminuria, or macroalbuminuria.

14. The method of claim 1 , wherein the Alport Syndrome is the X-linked form of Alport Syndrome.

15. The method of claim 1 , wherein the Alport Syndrome is the autosomal form of Alport Syndrome.

16. The method of claim 1 , comprising administering at least one additional therapy selected from an angiotensin II converting enzyme (ACE) inhibitor, an angiotensin II receptor blocker (ARB), an anti-hypertensive agent, a vitamin D analog, an oral phosphate binder, dialysis, and kidney transplant.

17. The method of claim 16 , wherein the angiotensin II converting enzyme (ACE) inhibitor is selected from captopril, enalapril, lisinopril, benazepril, quinapril, fosinopril, and ramipril; and wherein the angiotensin II receptor blocker (ARB) is selected from candesartan, irbesartan, olmesartan, losartan, valsartan, telmisartan, and eprosartan.

18. The method of claim 1 , wherein the nucleobase sequence of the modified oligonucleotide is at least 90% complementary to the nucleobase sequence of miR-21(SEQ ID NO: 1).

19. The method of claim 1 , wherein the modified oligonucleotide consists of 15 to 25 linked nucleosides.

20. The method of claim 1 , wherein the modified oligonucleotide consists of 15, 16, 17, 18, 19, 20, 21, or 22 linked nucleosides.

21. The method of claim 1 , wherein the modified oligonucleotide comprises at least one modified nucleoside.

22. The method of claim 21 , wherein the modified nucleoside is selected from an S-cEt nucleoside, a 2′-O-methoxyethyl nucleoside, and an LNA nucleoside.

23. The method of claim 1 , wherein the modified oligonucleotide comprises at least one modified internucleoside linkage.

24. The method of claim 1 , wherein each internucleoside linkage of the modified oligonucleotide is a modified internucleoside linkage.

25. The method of claim 24 , wherein the modified internucleoside linkage is a phosphorothioate internucleoside linkage.

26. The method of claim 1 , wherein the modified oligonucleotide has the structure 5′-A E C S ATC S AGTC S TGAU S AAGC S TA E -3′, where nucleosides not followed by a subscript indicate β-D-deoxyribonucleosides; nucleosides followed by a subscript “E” indicate 2′-MOE nucleosides; nucleosides followed by a subscript “S” indicate S-cEt nucleosides, and each internucleoside linkage is a phosphorothioate internucleoside linkage.

Assignments (5)
RELEASE OF SECURITY INTEREST Recorded May 14, 2024
From: OXFORD FINANCE LLC, AS COLLATERAL AGENT AND LENDER
To: REGULUS THERAPEUTICS INC.
Reel/Frame 067402/0782 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 3, 2019
From: REGULUS THERAPEUTICS INC.
To: SANOFI
Reel/Frame 049344/0688 →
RELEASE OF SECURITY INTEREST Recorded Nov 7, 2018
From: OXFORD FINANCE LLC
To: REGULUS THERAPEUTICS INC.
Reel/Frame 047445/0286 →
SECURITY INTEREST Recorded Aug 8, 2018
From: REGULUS THERAPEUTICS INC.
To: OXFORD FINANCE LLC, AS COLLATERAL AGENT AND LENDER
Reel/Frame 046748/0561 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 2, 2014
From: DUFFIELD, JEREMY; BHAT, BALKRISHEN; MACKENNA, DEIDRE
To: REGULUS THERAPEUTICS INC.
Reel/Frame 031872/0727 →
Continuity (3)
Provisional Application 61711514 · Oct 9, 2012
Provisional Application 61779137 · Mar 13, 2013
Related Publication 20140100263A1 · Apr 10, 2014