IP Library Granted Patent US 9,073,878
Granted Patent B2
US 9,073,878 · App. 14/085,545 · Granted Jul 7, 2015

Cyclic amines as bromodomain inhibitors

Inventors: David John Fairfax (Slingerlands, NY); Bryan Cordell Duffy (Glenmont, NY); Gregory Scott Martin (Colonie, NY); John Frederick Quinn (Albany, NY); Shuang Liu (Schenectady, NY); Gregory Steven Wagner (Foster City, CA); Peter Ronald Young (San Francisco, CA)
Assignee: Zenith Epigenetics Corp.
C07D265/32A61K45/06C07D239/91C07D401/04C07D401/14A61K31/517
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Quick Facts
Patent No.
US 9,073,878
App. No.
14/085,545
Granted
Jul 7, 2015
Kind
B2
Abstract

The present disclosure relates to compounds, which are useful for inhibition of BET protein function by binding to bromodomains, and their use in therapy.

Claims (93)

1. A compound of Formula I:

or a stereoisomer, tautomer, pharmaceutical acceptable salt, or hydrate thereof, wherein:

W 1 is selected from N and CR 1 ;

W 2 is selected from N and CR 2 ;

W 3 is selected from N and CR 3 ;

W 4 is selected from N and CR 4 ;

each W may be the same or different from each other;

A is selected from N and CH;

R 1 , and R 4 are each independently selected from hydrogen, alkyl, alkenyl, alkynyl, alkoxy, thioalkyl, aryloxy, aryl, amino, hydroxyl, and halogen;

R 2 and R 3 are each independently selected from hydrogen, alkyl, alkenyl, alkynyl, alkoxy, thioalkyl, aryloxy, aryl, hydroxyl, and halogen;

two adjacent substituents selected from R 1 , R 2 , R 3 , and R 4 may be connected in a 5- or 6- membered ring to form a bicyclic carbocycle or bicyclic heterocycle;

AR1 is a group selected from the following:

B is a group selected from the following:

each ring system may be substituted with one or more substituents independently selected from R 10 and R 11 ;

R 5 is selected from hydrogen, alkoxy, alkyl, thioalkyl, aryloxy, aryl, hydroxyl, and halogen;

R 6 is selected from hydrogen, alkoxy, alkyl, thioalkyl, aryloxy, aryl, and halogen;

R 7 is selected from hydrogen, alkyl, —SO 2 R 12 , —C(O)NR 12 R 13 , and —C(O)R 12 ;

R 8 and R 9 are independently selected from hydrogen, aryl, alkenyl, alkyl, —SO 2 R 12 , —C(O)NR 12 R 13 , and —C(O)R 12 ;

R 10 and R 11 are independently selected from hydrogen, halogen, alkyl, alkoxy, aryl, and hydroxyl;

R 12 and R 13 are independently selected from hydrogen, aryl, and alkyl;

Y is selected from NH, O, and S;

and

two adjacent substituents selected from R 5 , R 6 , R 6 , R 9 , R 10 , and R 11 may be connected in a 5- or 6-membered ring to form a carbocycle or heterocycle.

2. The compound according to claim 1

wherein R 1 , and R 4 are independently selected from hydrogen, alkyl, alkoxy, halogen, and amino and R 2 and R 3 are independently from hydrogen, alkyl, alkoxy, and halogen;

wherein at least one of R 1 -R 4 is not hydrogen;

wherein R 5 is selected from hydrogen, alkyl, alkoxy, and halogen;

wherein R 6 is selected from hydrogen and alkoxy optionally substituted with a hydroxyl or amino;

and/or

wherein Y is N.

3. The compound according to claim 2 ,

wherein AR1 is selected from

wherein B is selected from

wherein R 7 is selected from hydrogen and alkyl;

wherein R 8 and R 9 are independently selected from hydrogen and alkyl;

wherein R 10 and R 11 are independently selected from hydrogen and halogen;

wherein R 12 and R 13 are independently selected from hydrogen and alkyl.

4. A compound according to claim 1 selected from:

2-(3-(4-Isopropylpiperazin-1-yl)phenyl)-5,7-dimethoxyquinazolin-4(3H)-one;

2-(3-(4-Isopropylpiperazin-1-yl)-5-methoxyphenyl)-5,7-dimethoxyquinazolin-4(3H)-one;

5,7-Dimethoxy-2-(6-(4-(2-methoxyethyl)piperazin-1-yl)pyridin-2-yl)quinazolin-4(3H)-one;

2-(6-(4-(2-Hydroxyethyl)piperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one;

2-(6-(4-Isobutylpiperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one;

5,7-Dimethoxy-2-(6-(4-(2-(methylsulfonyl)ethyl)piperazin-1-yl)pyridin-2-yl)quinazolin-4(3H)-one;

Methyl 2-(4-(6-(5,7-dimethoxy-4-oxo-3,4-dihydroquinazolin-2-yl)pyridin-2-yl)piperazin-1-yl)acetate;

2-(6-(4-(1-Hydroxypropan-2-yl)piperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one;

2-(4-(6-(5,7-Dimethoxy-4-oxo-3,4-dihydroquinazolin-2-yl)pyridin-2-yl)piperazin-1-yl)propanamide;

2-(4-(6-(5,7-Dimethoxy-4-oxo-3,4-dihydroquinazolin-2-yl)pyridin-2-yl)piperazin-1-yl)acetic acid;

3-(4-(6-(5,7-Dimethoxy-4-oxo-3,4-dihydroquinazolin-2-yl)pyridin-2-yl)piperazin-1-yl)propanoic acid;

2-(5-(2-(Isopropylamino)ethoxy)-6-(4-isopropylpiperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one bis(trifluoroacetate);

2-(5-(2-Hydroxyethoxy)-6-(4-isopropylpiperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one acetate;

2-(6-(4-Isopropylpiperazin-1-yl)-5-methoxypyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one;

5,7-Dimethoxy-2-(6-(4-methylpiperazin-1-yl)pyridin-2-yl)quinazolin-4(3H)-one Hydrochloride;

5,7-Dimethoxy-2-(6-morpholinopyridin-2-yl)quinazolin-4(3H)-one Hydrochloride;

2-(6-(4-Isopropylpiperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one Hydrochloride;

5,7-Dimethoxy-2-(6-(4-(methylsulfonyl)piperazin-1-yl)pyridin-2-yl)quinazolin-4(3H)-one Hydrochloride;

5,7-Dimethoxy-2-(6-(4-propionylpiperazin-1-yl)pyridin-2-yl)quinazolin-4(3H)-one dihydrochloride;

2-(3-(4-Isopropylpiperazin-1-yl)-5-(trifluoromethoxy)phenyl)-5,7-dimethoxyquinazolin-4(3H)-one;

7-Fluoro-2-(6-(4-isopropylpiperazin-1-yl)pyridin-2-yl)-5-methoxyquinazolin-4(3H)-one Hydrochloride;

7-(Benzyloxy)-2-(6-(4-isopropylpiperazin-1-yl)pyridin-2-yl)-5-methoxyquinazolin-4(3-H)-one Hydrochloride;

2-(6-(4-Isopropylpiperazin-1-yl)pyridin-2-yl)-5-methoxy-7-phenylquinazolin-4(3H)-one;

8-(Benzyloxy)-2-(3-(4-isopropylpiperazin-1-yl)phenyl)-5-methoxyquinazolin-4(3H)-one;

4-(6-(5,7-Dimethoxy-4-oxo-3,4-dihydroquinazolin-2-yl)pyridin-2-yl)-N-isopropylpiperazine-1-carboxamide Hydrochloride;

2-(6-(4-Isopropyl-2-oxopiperazin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one Hydrochloride;

2-(6-(4-(Dimethylamino)piperidin-1-yl)pyridin-2-yl)-5,7-dimethoxyquinazolin-4(3H)-one;

5,7-Dimethoxy-2-(6-(4-methyl-3-oxopiperazin-1-yl)pyridin-2-yl)quinazolin-4(3H)-one;

2-(3-Chloro-5-(piperazin-1-yl)phenyl)-5,7-dimethoxyquinazolin-4(3H)-one, and

2-(3-Chloro-5-(4-isopropylpiperazin-1-yl)phenyl)-5,7-dimethoxyquinazolin-4(3H)-one.

5. A compound according to claim 1 , wherein R 6 is selected from the group represented by Formula II:

wherein:

D is selected from O and S;

E is selected from O, N, and S;

R 14 and R 15 are independently selected from hydrogen, alkyl, and cycloalkyl, wherein if E is O or S, only one of R 14 and R 15 is present; and

n is selected from 1, 2, and 3.

6. The compound according to claim 5

wherein D is oxygen

wherein n=1;

wherein R 14 and R 15 are independently selected from hydrogen, and alkyl;

and/or

wherein R 6 is selected from hydrogen, methoxy,

7. A pharmaceutical composition comprising a compound according to any one of claims 1 - 6 and a pharmaceutically acceptable carrier.

8. The compound of claim 2 , wherein R 1 is independently selected from alkoxy, halogen, and amino, and R 3 is independently selected from alkoxy, and halogen.

9. The compound of claim 8 , wherein R 1 is independently selected from methoxy, fluoride, and a substituted piperazine, and R 3 is independently selected from methoxy and fluoride.

10. The compound of claim 9 , wherein R 1 and R 3 are independently selected from alkoxy.

11. The compound of claim 2 , wherein R 1 and R 3 are methoxy and R 2 and R 4 are hydrogen.

12. The compound of claim 2 , wherein R 5 is selected from hydrogen, methyl, ethyl, propyl, and isopropyl, methoxy, ethoxy, propoxy, isopropoxy, —OCF 3 , fluoride, and chloride.

13. The compound of claim 12 , wherein R 5 is selected from hydrogen, methoxy, ethoxy, —OCF 3 , fluoride, chloride, methyl, and ethyl.

14. The compound of claim 2 , wherein R 6 is selected from hydrogen, methoxy, and ethoxy.

15. The compound of claim 2 , wherein R 6 is selected from hydrogen, methoxy;

16. The compound of claim 3 , wherein B is selected from

17. The compound of claim 3 , wherein R 8 and R 9 are independently selected from hydrogen, methyl, and ethyl.

18. The compound of claim 3 , wherein R 12 and R 13 are independently selected from hydrogen, methyl, ethyl, propyl, and isopropyl.

19. The compound of claim 6 , wherein R 14 and R 15 are independently selected from hydrogen and C1-C5 alkyl.

Assignments (5)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 23, 2016
From: ZENITH CAPITAL CORP.
To: ZENITH EPIGENETICS LTD.
Reel/Frame 041182/0891 →
CHANGE OF NAME Recorded Dec 21, 2016
From: ZENITH EPIGENETICS CORP.
To: ZENITH CAPITAL CORP.
Reel/Frame 041120/0548 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 23, 2015
From: FAIRFAX, DAVID JOHN; DUFFY, BRYAN CORDELL; MARTIN, GREGORY SCOTT; QUINN, JOHN FREDERICK; LIU, SHUANG; WAGNER, GREGORY STEVEN; YOUNG, PETER RONALD
To: RESVERLOGIX CORP.
Reel/Frame 036866/0237 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 23, 2015
From: RESVERLOGIX CORP.
To: RVX THERAPEUTICS INC.
Reel/Frame 036866/0250 →
GENERAL CONVEYANCE AND ASSUMPTION AGREEMENT Recorded Jul 14, 2014
From: RVX THERAPEUTICS INC.
To: ZENITH EPIGENETICS CORP.
Reel/Frame 033312/0422 →
Continuity (2)
Provisional Application 61729097 · Nov 21, 2012
Related Publication 20140142102A1 · May 22, 2014