IP Library Granted Patent US 8,999,682
Granted Patent B2
US 8,999,682 · App. 14/086,729 · Granted Apr 7, 2015

Manipulation of genes of the mevalonate and isoprenoid pathways to create novel traits in transgenic organisms

Inventors: Frederick M. Hahn (Paia, HI); Adelheid R. Kuehnle (Honolulu, HI)
Assignees: Danisco US Inc.; Kuehnle Agrosystems Company LLC
C12P9/00C12N9/90C12N15/52C12N15/8209C12N15/8214C12N15/8243
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Quick Facts
Patent No.
US 8,999,682
App. No.
14/086,729
Granted
Apr 7, 2015
Kind
B2
Abstract

Disclosed are the uses of specific genes of the mevalonate and isoprenoid biosynthetic pathways, and of inactive gene sites (the pseudogene) to (1) enhance biosynthesis of isopentenyl diphosphate, dimethylallyl diphosphate and isoprenoid pathway derived products in the plastids of transgenic plants and microalgae, (2) create novel antibiotic resistant transgenic plants and microalgae, and (3) create a novel selection system and/or targeting sites for mediating the insertion of genetic material into plant and microalgae plastids. The specific polynucleotides to be used, solely or in any combination thereof, are publicly available from GeneBank and contain open reading frames having sequences that upon expression will produce active proteins with the following enzyme activities: (a) acetoacetyl CoA thiolase (EC 2.3.1.9), (b) 3-hydroxy-3-methylglutaryl-coenzyme A (HMG-CoA) synthase (EC 4.1.3.5), (c) HMG-CoA reductase (EC 1.1.1.34), (d) mevalonate kinase (EC 2.7.1.36), (e) phosphomevalonate kinase (EC 2.7.4.2), (f) mevalonate diphosphate decarboxylase (EC 4.1.1.33), (g) isopentenyl diphosphate (IPP) isomerase (EC 5.3.3.2), and (h) phytoene synthase (EC 2.5.1.32).

Claims (28)

1. A transformed cell having increased isoprenoid production as compared to a non-transformed cell, said cell comprising one or more isolated polynucleotides which together encode the enzymes of the complete mevalonate pathway.

2. The cell of claim 1 , wherein the cell is a bacterial cell, a plant cell or a microalgae cell.

3. The cell of claim 2 , wherein the cell is an E. coli cell.

4. The cell of claim 1 , wherein one of the one or more polynucleotides comprises a polynucleotide sequence encoding isopentenyl pyrophosphate (IPP) isomerase.

5. A descendant transformed cell of the transformed cell of claim 1 , wherein said descendant cell exhibits increased isoprenoid production as compared to a non-transformed cell of the same type.

6. A transformed cell having increased isoprenoid production as compared to a non-transformed cell, wherein said cell is produced by a method comprising:

providing one or more isolated polynucleotides which together encode the enzymes of the complete mevalonate pathway;

providing a plurality of target cells;

introducing said isolated polynucleotide(s) into said target cells;

selecting target cells which have been transformed with said polynucleotide(s); and

growing said transformed cells under conditions whereby additional generations of descendant transformed cells are produced, said transformed cells exhibiting increased isoprenoid production as compared to non-transformed cells of the same type.

7. A cell culture comprising a transformed cell of claim 1 .

8. A cell culture comprising a transformed cell of claim 5 .

9. A method of increasing the production of isopentenyl pyrophosphate (IPP) comprising using the cell of claim 1 .

10. A method of increasing the production of isopentenyl pyrophosphate (IPP) comprising using the cell of claim 5 .

11. A method of increasing the production of isopentenyl pyrophosphate (IPP) comprising using the cell culture of claim 7 .

12. A method of increasing the production of isopentenyl pyrophosphate (IPP) comprising using the cell culture of claim 8 .

13. A method of increasing the production of isopentenyl pyrophosphate (IPP) via a mevalonate pathway in cells comprising:

providing a plurality of target cells that do not naturally possess the mevalonate pathway;

providing one or more isolated polynucleotides which together encode the enzymes of the complete mevalonate pathway;

introducing said isolated polynucleotide(s) into said target cells;

selecting target cells which have been transformed with said polynucleotide(s); and

culturing the transformed cells under conditions whereby additional generations of descendant transformed cells are produced, said transformed cells exhibiting increased IPP production as compared to non-transformed cells of the same type.

14. The method of claim 13 , wherein one of the one or more isolated polynucleotides comprises a polynucleotide sequence encoding isopentenyl pyrophosphate (IPP) isomerase.

15. The method of claim 13 , wherein the method further comprises converting IPP to dimethylallyl diphosphate (DMAPP).

16. The method of claim 14 , wherein the method further comprises converting IPP to dimethylallyl diphosphate (DMAPP).

17. The method of claim 13 , wherein the target cells are bacterial cells.

18. The method of claim 17 , wherein the bacterial cells are E. coli cells.

Assignments (5)
SECURITY INTEREST Recorded Aug 17, 2023
From: AMYRIS, INC.; AMYRIS CLEAN BEAUTY, INC.; AMYRIS FUELS, LLC; AB TECHNOLOGIES LLC; APRINNOVA, LLC; AMYRIS-OLINKA, LLC; ONDA BEAUTY INC.; UPLAND 1 LLC; AMYRIS ECO-FAB LLC; CLEAN BEAUTY 4U HOLDINGS, LLC; AMYRIS CLEAN BEAUTY LATAM LTDA; INTERFACES INDUSTRIA E COMERCIA DE COSMETICOS LTDA; AMYRIS BIOTECHNOLOGIA DO BRASIL LTDA; AMYRIS EUROPE TRADING B.V. (NETHERLANDS); AMYRIS BIO PRODCUTS PORTUGAL, UNIPESSOAL, LDA; BEAUTY LABS INTERNATIONAL LIMITED; AMYRIS UK TRADING LIMITED
To: EUAGORE, LLC
Reel/Frame 064619/0778 →
SECURITY INTEREST Recorded Aug 3, 2023
From: AMYRIS CLEAN BEAUTY, INC.; AMYRIS FUELS, LLC; AB TECHNOLOGIES LLC; AMYRIS, INC.
To: MUIRISC, LLC
Reel/Frame 064492/0518 →
RELEASE OF SECURITY INTEREST Recorded Feb 14, 2023
From: NAXYRIS S.A.
To: AMYRIS, INC.
Reel/Frame 062760/0753 →
SECURITY INTEREST Recorded Aug 16, 2019
From: AMYRIS, INC.
To: NAXYRIS S.A.
Reel/Frame 050081/0106 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 19, 2016
From: DANISCO US INC.
To: THE GOODYEAR TIRE & RUBBER COMPANY
Reel/Frame 040066/0867 →
Continuity (8)
Continuation 13602723 · Sep 4, 2012
Continuation 13092608 · Apr 22, 2011
Continuation 12026316 · Feb 5, 2008
Continuation 11489050 · Jul 18, 2006
Continuation 10835516 · Apr 28, 2004
Continuation 09918740 · Jul 31, 2001
Provisional Application 60221703 · Jul 31, 2000
Related Publication 20140106416A1 · Apr 17, 2014