IP Library Granted Patent US 9,982,060
Granted Patent B2
US 9,982,060 · App. 14/187,728 · Granted May 29, 2018

Bi-specific fusion proteins

Inventors: Ulrik Bjerl Nielsen (Quincy, MA); Thomas Wickham (Groton, MA); Birgit Schoeberl (Cambridge, MA); Brian Harms (Roslindale, MA); Bryan Linggi (Richland, WA); Matthew Onsum (Jamaica Plain, MA); Byron DeLaBarre (Cambridge, MA)
Assignee: Merrimack Pharmaceuticals, Inc.
C07K16/44A61K45/06A61K47/48538A61K47/66A61K47/6811A61K47/6891B82Y5/00C07K14/47C07K14/475C07K14/485C07K14/65C07K16/46C12N15/62A61K38/00C07K2317/31C07K2317/76C07K2319/00C07K2319/80
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Quick Facts
Patent No.
US 9,982,060
App. No.
14/187,728
Granted
May 29, 2018
Kind
B2
Abstract

Bi-specific fusion proteins with therapeutic uses are provided, as well as pharmaceutical compositions comprising such fusion proteins, and methods for using such fusion proteins to repair damaged tissue. The bi-specific fusion proteins generally comprise: (a) a targeting polypeptide domain that binds to an ischemia-associated molecule; and (b) an activator domain that that detectably modulates the activity of a cellular network.

Claims (27)

1. A method, the method comprising:

(a) providing a bi-specific fusion protein comprising (a) annexin V consisting of an amino acid sequence of SEQ ID NO: 31, and (b) IGF-1 comprising an amino acid sequence having at least 98% identity to SEQ ID NO: 3; and

(b) administering in a patient a therapeutically effective amount of the bi-specific fusion protein,

wherein upon administration of the bi-specific fusion protein, the annexin V binds phosphatidylserine associated with the surface of apoptotic cells in tissue with a Kd ranging from 10 −6 M to 10 −12 M and the IGF-1 binds an IGF-1 receptor,

wherein binding the bi-specific fusion protein to the IGF-1 receptor activates the IGF-1 receptor, and

wherein administration results in tissue regeneration and improvement of the function of the tissue.

2. A method, the method comprising:

(a) providing a bi-specific fusion protein comprising annexin V and IGF-1; and

(b) administering in a patient a therapeutically effective amount of the bi-specific fusion protein,

wherein upon administration of the bi-specific fusion protein, the annexin V binds phosphatidylserine associated with the surface of apoptotic cells in tissue with a Kd ranging from 10 −6 M to 10 −12 M and the IGF-1 binds an IGF-1 receptor,

wherein binding the bi-specific fusion protein to the IGF-1 receptor activates the IGF-1 receptor, and wherein administration results in tissue regeneration and improvement of the function of the tissue, wherein annexin V comprises SEQ ID NO: 31, and wherein IGF-1 comprises a sequence selected from the group consisting of SEQ ID NO: 3, SEQ ID NO: 4, and SEQ ID NO: 5.

3. The method of claim 1 wherein upon administration of the bi-specific protein, the bi-specific protein prevents cell damage, increases survival, promotes cell growth, promotes motility of stem cells, recruits stem cells, and/or promotes differentiation of stem cells.

4. The method of claim 3 further comprising administering stem cells to the patient before, after or simultaneously with the effective amount of the bi-specific fusion protein.

5. The method of claim 1 wherein, in the step of providing, the bi-specific fusion protein further comprises a polypeptide linker, wherein the polypeptide linker extends the half life of the bi-specific fusion protein.

6. The method of claim 5 wherein, in the step of providing, the linker is a non-immunogenic protein.

7. The method of claim 5 wherein, in the step of providing, the linker is a human serum protein or derivative thereof.

8. The method of claim 7 wherein the serum protein is a human alpha-fetoprotein or a human serum albumin.

9. The method of claim 5 wherein, in the step of providing, the linker comprises at least 100 consecutive amino acids that are at least 80% identical to a human serum albumin amino acid sequence.

10. The method of claim 5 wherein, in the step of providing, the linker has an amino acid sequence recited in any one of SEQ ID NOs: 10, 12, 14-29 and 45-49.

11. The method of claim 1 wherein, in the step of providing, the annexin V is at the amino terminus of the IGF 1 or the annexin V is at the carboxy terminus of the IGF 1.

12. The method of claim 1 wherein, in the step of administering, the tissue is a cardiac tissue or kidney tissue.

13. The method of claim 1 wherein, in the step of administering, the bi-specific fusion protein is administered locally to an area in need of treatment to a patient following an ischemic event.

14. The method of claim 1 wherein, in the step of administering, the IGF-1 activates the IGF-1 receptor to a degree that is at least 1% of that observed with wild-type human IGF-1.

15. A method, the method comprising

(a) providing a bi-specific fusion protein comprising (i) annexin V; (ii) IGF-1; and (iii) a polypeptide linker, wherein the polypeptide linker extends the half life of the bi-specific fusion protein; and

(b) administering in a patient following an ischemic event a therapeutically effective amount of the bi-specific fusion protein,

wherein upon administration of the bi-specific fusion protein, the annexin V binds phosphatidylserine associated with the surface of apoptotic cells and the IGF-1 binds an IGF-1 receptor, wherein binding the bi-specific fusion protein to the IGF-1 receptor activates the IGF-1 receptor and wherein administration results in tissue regeneration and improvement of the function of the tissue wherein annexin V comprises SEQ ID NO: 31, and wherein IGF-1 comprises a sequence selected from the group consisting of SEQ ID NO: 3, SEQ ID NO: 4, and SEQ ID NO: 5.

Assignments (2)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 8, 2019
From: MERRIMACK PHARMACEUTICALS, INC.
To: SILVER CREEK PHARMACEUTICALS, INC.
Reel/Frame 049112/0597 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Sep 11, 2017
From: NIELSEN, ULRIK; WICKHAM, THOMAS; SCHOEBERL, BIRGIT; HARMS, BRIAN; LINGGI, BRYAN; ONSUM, MATTHEW; DELABARRE, BRYON
To: MERRIMACK PHARMACEUTICALS, INC.
Reel/Frame 043811/0155 →
Continuity (3)
Division 13112907 · May 20, 2011
Provisional Application 61347040 · May 21, 2010
Related Publication 20140178380A1 · Jun 26, 2014