IP Library Granted Patent US 9,452,170
Granted Patent B2
US 9,452,170 · App. 14/210,198 · Granted Sep 27, 2016

Compounds and methods for inducing chondrogenesis

Inventors: Peter G. Schultz (La Jolla, CA); Arnab K. Chatterjee (San Diego, CA); Shoutian Zhu (Carlsbad, CA); Joshua Payette (Hollis, NH); Hongchul Yoon (San Diego, CA); Baiyuan Yang (San Diego, CA)
Assignees: The California Institute for Biomedical Research; The Scripps Research Institute
A61K31/54A61K31/18A61K31/192A61K31/194A61K31/196A61K31/24A61K31/255A61K31/27A61K31/277A61K31/357A61K31/36A61K31/365A61K31/402A61K31/4035A61K31/415A61K31/4164A61K31/42A61K31/426A61K31/433A61K31/44A61K31/495A61K31/5375A61K45/06C07C233/66C07C233/69C07C233/73C07C233/75C07C233/76C07C233/80C07C233/81C07C233/87C07C235/52C07C235/60C07C235/84C07C237/22C07C251/48C07C255/60C07C271/20C07C275/42C07C311/05C07C311/08C07C311/13C07C311/17C07C311/21C07C311/24C07C311/46C07C317/40C07D207/27C07D209/46C07D209/48C07D213/79C07D231/40C07D233/64C07D261/14C07D277/46C07D285/135C07D295/26C07D307/88C07D317/28C07D317/66C07D319/08C07D319/18C12N5/0655C12N2506/1353
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Quick Facts
Patent No.
US 9,452,170
App. No.
14/210,198
Granted
Sep 27, 2016
Kind
B2
Abstract

Described herein are compounds and compositions for the amelioration of arthritis or joint injuries by inducing mesenchymal stem cells into chondrocytes.

Claims (85)

1. A method of (a) ameliorating arthritis or joint injury in a mammal, the method comprising administering to a joint of the mammal a composition comprising a therapeutically effective amount of a compound of Formula I, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof; or (b) inducing differentiation of mesenchymal stem cells into chondrocytes, the method comprising contacting mesenchymal stem cells with a sufficient amount of a compound of Formula I, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof:

wherein

each R 1 is independently halo, optionally substituted alkyl, optionally substituted alkoxy, optionally substituted aryloxy, CN, NO 2 , SR 4 , S(O)R 4 , SO 2 R 4 , NR 4 R 11 , or CO 2 R 4 ;

n is 0, 1, 2, 3, or 4;

m is 1, 2, 3, or 4;

B is CO 2 R 4 , CH 2 CO 2 H, CH 2 CO 2 R 4 , or optionally substituted phenyl;

Y is a bond, —(CR 5 R 6 )—, —(CR 7 R 8 )(CR 9 R 10 )—, or —(CR 7 R 8 )(CR 9 R 10 )X—;

X is O or CR 5 R 6 ;

R 2 is halo, C(O)R 4 , CO 2 R 4 , C(O)NR 4 R 11 , alkyl, optionally substituted alkoxy, haloalkyl, SO 2 R 4 , (CR 7 R 8 )OR 4 , (CR 7 R 8 )NR 4 R 11 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)OR 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )(CR 9 R 10 )C(O)R 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)OR 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , or C(═NOR 4 )R 4 ;

each R 3 is independently selected from H, CN, halo, C(O)R 4 , CO 2 R 4 , C(O)NR 4 R 11 , alkyl, optionally substituted alkoxy, SO 2 R 4 , (CR 7 R 8 )OR 4 , (CR 7 R 8 )NR 4 R 11 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)OR 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )(CR 9 R 10 )C(O)R 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)OR 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , and C(═NOR 4 )R 4 ;

or R 3 together with an adjacent R 3 or with R 2 form a ring;

each R 4 is independently selected from H and optionally substituted alkyl;

each R 5 , R 6 , R 7 , R 8 , R 9 , and R 10 is independently selected from H, halo, optionally substituted alkyl, OH, CO 2 R 4 , NR 4 R 11 , and optionally substituted alkoxy; and

R 11 is H, optionally substituted alkyl, C(O)R 4 , C(O)OR 4 , C(O)NR 4 R 4 , or SO 2 R 4 ;

provided that

a) if Y is a bond and R 3 is H, then R 2 is selected from C(O)NR 4 R 11 , (CR 7 R 8 )OR 4 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)OR 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )(CR 9 R 10 )C(O)R 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)OR 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , and C(═NOR 4 )R 4 ; and

R 2 is not p-CH 2 OR 4 , p-CH 2 CH 2 OH, or p-CH 2 CH 2 CH 2 OH; and

b) the compound is not selected from

2. A method of (a) ameliorating arthritis or joint injury in a mammal, the method comprising administering to a joint of the mammal a composition comprising a therapeutically effective amount of a compound of Formula Ib, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof; or (b) inducing differentiation of mesenchymal stem cells into chondrocytes, the method comprising contacting mesenchymal stem cells with a sufficient amount of a compound of Formula Ib, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof:

wherein

each R 1 is independently halo, optionally substituted alkyl, optionally substituted alkoxy, optionally substituted aryloxy, CN, NO 2 , SR 4 , S(O)R 4 , SO 2 R 4 , NR 4 R 11 , or CO 2 R 4 ;

n is 0, 1, 2, 3, or 4;

B is CO 2 R 4 ;

R 2 is C(O)NR 4 R 11 , (CR 7 R 8 )OR 4 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)OR 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )(CR 9 R 10 )C(O)R 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)OR 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , or C(═NOR 4 )R 4 ;

R 3 is H;

X is O or CR 5 R 6 ;

each R 4 is independently selected from H and optionally substituted alkyl;

each R 5 , R 6 , R 7 , R 8 , R 9 , and R 10 is independently selected from H, halo, optionally substituted alkyl, OH, NR 4 R 11 , and optionally substituted alkoxy; and

R 11 is H, optionally substituted alkyl, C(O)R 4 , C(O)OR 4 , C(O)NR 4 R 4 , or SO 2 R 4 ;

provided that if n is 0, then R 2 is not p-CH 2 OR 4 , p-CH 2 CH 2 OH, or p-CH 2 CH 2 CH 2 OH.

3. A method of (a) ameliorating arthritis or joint injury in a mammal, the method comprising administering to a joint of the mammal a composition comprising a therapeutically effective amount of a compound of Formula Ic, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof; or (b) inducing differentiation of mesenchymal stem cells into chondrocytes, the method comprising contacting mesenchymal stem cells with a sufficient amount of a compound of Formula Ic, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof:

wherein

each R 1 is independently halo, optionally substituted alkyl, optionally substituted alkoxy, optionally substituted aryloxy, CN, NO 2 , SR 4 , S(O)R 4 , SO 2 R 4 , NR 4 R 11 , CO 2 H, or CO 2 R 4 ;

n is 0, 1, 2, 3, or 4;

m is 1, 2, 3, or 4;

B is CO 2 R 4 ;

Y is —(CR 5 R 6 )—;

C is phenyl, pyridyl, pyrimidinyl, pyridazinyl, pyrazinyl, thiazolyl, isoxazolyl, or pyrazolyl;

X is O or CR 5 R 6 ;

R 2 is halo, C(O)R 4 , CO 2 R 4 , C(O)NR 4 R 11 , alkyl, optionally substituted alkoxy, haloalkyl, SO 2 R 4 , SO 2 NH 2 , SO 3 H, (CR 7 R 8 )OR 4 , (CR 7 R 8 )NR 4 R 11 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)OR 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )(CR 9 R 10 )C(O)R 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)OR 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , or C(═NOR 4 )R 4 ;

each R 3 is independently selected from H, CN, halo, C(O)R 4 , CO 2 R 4 , C(O)NR 4 R 11 , alkyl, optionally substituted alkoxy, haloalkyl, SO 2 R 4 , (CR 7 R 8 )OR 4 , (CR 7 R 8 )NR 4 R 11 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)OR 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )(CR 9 R 10 )C(O)R 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)OR 4 , X(CR 7 R 8 )(CR 9 R 10 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , and C(═NOR 4 )R 4 ;

or R 3 together with an adjacent R 3 or with R 2 form a ring;

each R 4 is independently selected from H and optionally substituted alkyl;

each R 5 , R 6 , R 7 , R 8 , R 9 , and R 10 is independently selected from H, halo, optionally substituted alkyl, OH, CO 2 R 4 , NR 4 R 11 , and optionally substituted alkoxy; and

R 11 is H, optionally substituted alkyl, C(O)R 4 , C(O)OR 4 , C(O)NR 4 R 4 , or SO 2 R 4 ;

provided that the compound is not

4. The method of claim 1 , wherein:

R 2 is halo, C(O)R 4 , alkyl, optionally substituted alkoxy, haloalkyl, (CR 7 R 8 )OR 4 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )C(O)OR 4 , or X(CR 7 R 8 )C(O)NR 4 R 11 ; and

each R 3 is independently selected from CN, halo, C(O)R 4 , CO 2 H, C(O)NR 4 R 11 , alkyl, or optionally substituted alkoxy;

or R 3 together with an adjacent R 3 or with R 2 form a ring.

5. The method of claim 4 , wherein:

R 2 is F, Cl, C(O)CH 3 , CH 3 , CF 3 , OCH 3 , OEt, OPr, OCF 3 , OCHF 2 , (CR 7 R 8 )OR 4 , (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )C(O)OR 4 , or X(CR 7 R 8 )C(O)NR 4 R 11 ; and

each R 3 is independently selected from CN, F, Cl, C(O)CH 3 , CO 2 H, C(O)NH 2 , CH 3 , OCF 3 , or OCH 3 ;

or R 3 together with an adjacent R 3 or with R 2 form a ring.

6. The method of claim 5 wherein R 2 is F, Cl, C(O)CH 3 , CH 3 , CF 3 , OCH 3 , OEt, OPr, OCF 3 , OCHF 2 , CH 2 OCH 3 , CH 2 OH, CH 2 CH 2 OH, CHOHCH 2 OH, CH 2 CH 2 CH 2 OH, CH 2 CHOHCH 2 OH, OCH 2 C(O)OH, or OCH 2 C(O)NH 2 .

7. The method of claim 6 , wherein each R 3 is independently selected from CN, F, Cl, C(O)CH 3 , or CO 2 H.

8. The method of claim 1 , wherein:

R 2 is (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , or C(═NOR 4 )R 4 ; and

R 3 is H.

9. The method of claim 2 , wherein:

R 2 is (CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )OR 4 , X(CR 7 R 8 )(CR 9 R 10 )NR 4 R 11 , (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)R 4 , X(CR 7 R 8 )C(O)NR 4 R 11 , (CR 7 R 8 )NR 4 SO 2 R 4 , or C(═NOR 4 )R 4 ; and

R 3 is H.

10. The method of claim 3 , wherein C is phenyl.

11. The method of claim 3 , wherein C is pyridinyl, pyrimidinyl, pyridazinyl, or pyrazinyl.

12. The method of claim 3 , wherein:

R 2 is halo, C(O)R 4 , CO 2 R 4 , C(O)NR 4 R 11 , alkyl, optionally substituted alkoxy, haloalkyl, SO 2 NH 2 , SO 3 H, (CR 7 R 8 )C(O)R 4 , (CR 7 R 8 )C(O)OR 4 , (CR 7 R 8 )C(O)NR 4 R 11 , X(CR 7 R 8 )C(O)OR 4 , or X(CR 7 R 8 )C(O)NR 4 R 11 ; and

each R 3 is independently selected from H, CN, halo, CO 2 H, or haloalkyl.

13. The method of claim 1 , wherein B is CO 2 R 4 and R 4 is optionally substituted alkyl.

14. The method of claim 2 , wherein B is CO 2 R 4 and R 4 is optionally substituted alkyl.

15. The method of claim 3 , wherein B is CO 2 R 4 and R 4 is optionally substituted alkyl.

16. The method of claim 1 , wherein B is CO 2 R 4 and R 4 is hydrogen.

17. The method of claim 2 , wherein B is CO 2 R 4 and R 4 is hydrogen.

18. The method of claim 3 , wherein B is CO 2 R 4 and R 4 is hydrogen.

19. The method of claim 1 , wherein n is 0, 1, or 2.

20. The method of claim 19 , wherein R 1 is independently selected from Cl, F, CH 2 OH, CH 2 NH 2 , OCH 3 , OCF 3 , OCHF 2 , CN, NO 2 , CO 2 H, and CO 2 CH 3 .

21. The method of claim 2 , wherein n is 0, 1, or 2.

22. The method of claim 21 , wherein R 1 is independently selected from Cl, F, CH 2 OH, CH 2 NH 2 , OCH 3 , OCF 3 , OCHF 2 , CN, NO 2 , CO 2 H, and CO 2 CH 3 .

23. The method of claim 3 , wherein n is 0, 1, or 2.

24. The method of claim 23 , wherein R 1 is independently selected from Cl, F, CH 2 OH, CH 2 NH 2 , OCH 3 , OCF 3 , OCHF 2 , CN, NO 2 , CO 2 H, and CO 2 CH 3 .

25. The method of claim 1 , wherein the compound, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof, is selected from:

26. The method of claim 1 , wherein the mammal is a human, a dog, a cat, or a horse.

27. The method of claim 2 , wherein the mammal is a human, a dog, a cat, or a horse.

28. The method of claim 3 , wherein the mammal is a human, a dog, a cat, or a horse.

29. The method of claim 2 , wherein the compound, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof, is selected from

30. The method of claim 3 , wherein the compound, or a pharmaceutically acceptable salt, solvate, polymorph, ester, N-oxide, or stereoisomer thereof, is selected from:

Assignments (3)
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Mar 13, 2019
From: THE CALIFORNIA INSTITUTE FOR BIOMEDICAL RESEARCH
To: THE SCRIPPS RESEARCH INSTITUTE
Reel/Frame 048590/0059 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 14, 2014
From: SCHULTZ, PETER G.; CHATTERJEE, ARNAB K.; ZHU, SHOUTIAN; YOON, HONGCHUL; YANG, BAIYUAN
To: THE CALIFORNIA INSTITUTE FOR BIOMEDICAL RESEARCH
Reel/Frame 032890/0517 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded May 14, 2014
From: SCHULTZ, PETER G.; ZHU, SHOUTIAN; PAYETTE, JOSHUA
To: THE SCRIPPS RESEARCH INSTITUTE
Reel/Frame 032890/0554 →
Continuity (2)
Provisional Application 61794094 · Mar 15, 2013
Related Publication 20140271955A1 · Sep 18, 2014