IP Library Granted Patent US 9,512,096
Granted Patent B2
US 9,512,096 · App. 14/366,590 · Granted Dec 6, 2016

Synthesis of amine substituted 4,5,6,7-tetrahydrobenzothiazole compounds

Inventors: Weirong Chen (Waltham, MA); Michael Humora (Cranbury, NJ); Daw-long Albert Kwok (Gillette, NJ); William F. Kiesman (Wayland, MA); Erwin Ayandra Irdam (Melrose, MA)
Assignee: Knopp Biosciences, LLP
C07D277/82
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Quick Facts
Patent No.
US 9,512,096
App. No.
14/366,590
Granted
Dec 6, 2016
Kind
B2
Abstract

The present invention is related to an improved process for the preparation of amino-substituted 4,5,6,7-tetrahydrobenzothiazole compounds of formula I, such as the compound 2-amino-4,5,6,7-tetrahydro-6-(n-propylamino)benzothiazole. The invention further relates to an improved synthesis of (R)-2-amino-4,5,6,7-tetrahydro-6-(n-propylamino)benzothiazole. The invention also relates to the methods and intermediates associated with the synthetic process.

Claims (98)

1. A process for preparing a compound of formula I (HOTs)

wherein R 1 and R 2 are each independently hydrogen or C 1-6 alkyl, wherein each C 1-6 alkyl is optionally and independently substituted with up to 3 occurrences of C 1-6 alkyl, aryl or heteroaryl;

the process comprising contacting a mixture, which comprises a compound of formula II

and a solvent, with a compound having the formula

in the presence of a base, to provide a compound of formula I (HOTs) , wherein the solvent is acetonitrile, a mixture of acetonitrile and water, IPA, a mixture of IPA and water, a mixture of acetonitrile and IPA, or a mixture of acetonitrile, IPA and water; isolating the compound of formula I (HOTs) ,

a) forming a mixture comprising the compound of formula I (HOTs) , IPA and water, and heating the mixture to about 78° C.;

b) cooling the mixture to about 5° C.; and

c) isolating the solid compound of formula I (HOTs) formed during step b.

2. The process of claim 1 , wherein R 2 is hydrogen.

3. The process of claim 1 , wherein R 1 is C 1-6 alkyl.

4. The process of claim 3 , wherein R 1 is n-propyl.

5. The process of claim 1 , wherein the solvent is a mixture of acetonitrile and water, a mixture of IPA and water, a mixture of acetonitrile and IPA, or a mixture of acetonitrile, IPA and water.

6. The process of claim 5 , wherein the solvent is a mixture of acetonitrile and water.

7. The process of claim 6 , wherein water is present from about 0% to about 10% by weight in the mixture of acetonitrile and water.

8. The process of claim 7 , wherein the ratio of the mixture of acetonitrile to water is about 37:1 wt/wt.

9. The process of claim 5 , wherein the solvent is a mixture of acetonitrile, IPA and water.

10. The process of claim 9 , wherein water is present in an amount from about 0% to about 10% by weight of the mixture, acetonitrile is present in an amount from about 0% to about 50% by weight of the mixture, and IPA is present in an amount from about 0% to about 50% by weight of the mixture.

11. The process of claim 1 , wherein the stereochemistry of the carbon atom to which the —NR 1 (R 2 ) moiety is attached is in the (R) configuration.

12. The process of claim 1 , wherein the base is triethylamine, DIPEA, pyridine or DBU.

13. The process of claim 12 , wherein the base is DIPEA.

14. The process of claim 1 , wherein the ratio of IPA to water in step a is about 2:1 v/v.

15. The process of claim 1 , further comprising the process of producing a compound of formula I

the process comprising the steps of:

a) forming a biphasic mixture comprising a compound of formula I (HOTs) , 2-methyltetrahydrofuran and brine, wherein the brine has a salt content of about 2-20% by weight; and

b) contacting the mixture with a base to produce a compound of formula I.

16. The process of claim 15 , wherein the ratio of 2-methyltetrahydrofuran to brine in step a is about 1.8:1 v/v.

17. The process of claim 15 , wherein the base is sodium hydroxide, potassium hydroxide, sodium carbonate or potassium carbonate.

18. The process of claim 17 , wherein the base is sodium hydroxide.

19. The process of claim 18 , wherein the sodium hydroxide is present in about 1 molar equivalent.

20. The process of claim 15 , further comprising preparing a compound of formula I (2 HCl—H2O)

comprising the steps of:

a) forming a mixture comprising a compound of formula I, 2-methyltetrahydrofuran and IPA;

b) contacting the mixture with HCl; and

c) isolating the solid compound of formula I (2 HCl—H2O) produced in step b.

21. The process of claim 20 , wherein the ratio of 2-methyltetrahydrofuran to IPA in step a is about 1.8:1 v/v.

22. The process of claim 20 , wherein HCl in a solvent is added to the mixture comprising a compound of formula I, 2-methyltetrahydrofuran and IPA.

23. The process of claim 22 , wherein the HCl is added to the mixture as a solution in IPA.

24. The process of claim 20 , wherein the HCl is present in an amount of about 2 molar equivalents.

25. The process of claim 20 , further comprising the steps of:

a) forming a mixture comprising compound 1 (2 HCl—H2O) , IPA and water;

b) heating the mixture to a temperature from about 75° C. to about 80° C.;

c) cooling the mixture to about 50° C.;

d) removing water from the mixture;

e) cooling the solution to a temperature from about 0° C. to about 5° C.; and

f) isolating the solid Compound 1 (2 HCl—H2O) .

26. The process of claim 25 , wherein the ratio of IPA to water in step a is about 6:1.

27. The process of claim 25 , wherein water is removed from the solution in step d by azeotropic distillation of IPA and water.

28. The process of claim 27 , wherein the distillation is performed at reduced pressure.

29. The process of claim 25 , wherein step d of the process further includes the steps of:

a) reducing the volume of the mixture by distillation at reduced pressure;

b) diluting the mixture with IPA; and

c) optionally repeating steps a and b one or more times.

30. The process of claim 29 , wherein the water content of the resulting mixture is about 3-10%.

31. The process of claim 29 , further comprising the step of adding a specific volume of IPA to the mixture to produce a final water content in the supernatant portion of the mixture of about 6%, wherein the specific volume of IPA is determined by performing the calculation: Final volume (mL) of IPA to be added to the mixture=((24×KF×S)/(1−6.5×KF))−(2.4×KF), wherein “KF” is the water content, expressed as a decimal, as determined by the Karl Fischer method, and “S” is the weight in grams of starting compound of formula I (2 HCl—H2O) .

32. A process for preparing Compound 1 (2 HCl—H2O)

wherein the process comprises the steps of:

a) contacting a mixture comprising Compound 2

and a solvent, with n-PrOTs and DIPEA to provide Compound 1 (HOTs)

wherein the solvent is acetonitrile, a mixture of acetonitrile and water, IPA, a mixture of IPA and water, a mixture of acetonitrile and IPA, or a mixture of acetonitrile, IPA and water;

b) isolating the solid Compound 1 (HOTs) formed in step a;

c) forming a mixture comprising Compound 1 (HOTs) , IPA and water, and heating the mixture to about 78° C.;

d) cooling the mixture to about 5° C.;

e) isolating the solid Compound 1 (HOTs) formed in step d;

f) forming a biphasic mixture comprising Compound 1 (HOTs) , 2-methyltetrahydrofuran and brine, wherein the brine has a salt content of about 2-20% by weight;

g) contacting the mixture with sodium hydroxide to form Compound 1

h) forming a mixture comprising Compound 1, 2-methyltetrahydrofuran and IPA;

i) contacting the mixture with HCl; and

j) isolating the solid Compound 1 (2 HCl—H2O) produced in step i.

33. The process of claim 32 , wherein the solvent is a mixture of acetonitrile and water, a mixture of IPA and water, a mixture of acetonitrile and IPA, or a mixture of acetonitrile, IPA and water.

34. The process of claim 33 , wherein the solvent is a mixture of acetonitrile and water.

35. The process of claim 34 , wherein water is present from about 0% to about 10% by weight in the mixture of acetonitrile and water.

36. The process of claim 35 , wherein the ratio of acetonitrile to water in step a is about 37:1 wt/wt.

37. The process of claim 33 , wherein the solvent is a mixture of acetonitrile, IPA and water.

38. The process of claim 37 , wherein water is present in an amount from about 0% to about 10% by weight of the mixture, acetonitrile is present in an amount from about 0% to about 50% by weight of the mixture, and IPA is present in an amount from about 0% to about 50% by weight of the mixture.

39. The process of claim 32 , wherein the ratio of IPA to water in step c is about 3:1 v/v.

40. The process of claim 32 , wherein the yield of Compound 1 (HOTs) isolated in step e is greater than 80%, the chemical purity of Compound 1 (HOTs) isolated in step e is greater than 95%, and the enantiomeric excess of Compound 1 (HOTs) isolated in step e is greater than the enantiomeric excess of the starting Compound 2.

41. The process of claim 32 , wherein the ratio of 2-methyltetrahydrofuran to brine in step f is about 1.8:1 v/v.

42. The process of claim 32 , wherein the ratio of 2-methyltetrahydrofuran to IPA in step h is about 1.8:1 v/v.

43. The process of claim 32 , further comprising the steps of:

a) forming a mixture comprising Compound 1 (2 HCl—H2O) , IPA and water;

b) heating the mixture to a temperature from about 75° C. to about 80° C.;

c) cooling the solution to about 50° C.;

d) removing water from the solution;

e) cooling the solution to a temperature from about 0° C. to about 5° C.; and

f) removing the solid Compound 1 (2 HCl—H2O) from the liquid phase.

44. The process of claim 43 , wherein the ratio of IPA to water in step a is about 8:1.

45. The process of claim 43 , wherein water is removed from the solution in step d by azeotropic distillation of IPA and water.

46. The process of claim 45 , wherein the distillation is performed at reduced pressure.

47. The process of claim 43 , wherein step d of the process further includes the steps of:

a) reducing the volume of the mixture by distillation at reduced pressure;

b) diluting the mixture with IPA; and

c) optionally repeating steps a and b one or more times.

48. The process of claim 47 , wherein the water content of the resulting mixture is about 3-10%.

49. The process of claim 47 , wherein the yield of Compound 1 (2 HCl—H2O) removed in step f is greater than 90%, the chemical purity is greater than 99%, and the enantiomeric excess is from about 99% to about 100%.

50. The process of claim 49 , wherein the enantiomeric excess of Compound 1 (2 HCl—H2O) removed in step f is about 100%.

51. The process of claim 47 , further comprising the step of adding a specific volume of IPA to the mixture to produce a final water content in the supernatant portion of the mixture of about 6%, wherein the specific volume of IPA is determined by performing the calculation: Final volume (mL) of IPA to be added to the mixture=((24×KF×S)/(1−6.5×KF))−(2.4×KF), wherein “KF” is the water content, expressed as a decimal, as determined by the Karl Fischer method, and “S” is the weight in grams of starting compound of Compound 1 (2 HCl—H2O) .

52. The process of claim 47 , wherein the solid Compound 1 (2 HCl—H2O) isolated from the process is in the polymorphic Form A.

53. The process of claim 52 , wherein the water content of the solid Compound 1 (2 HCl—H2O) in the polymorphic Form A is from about 5% to about 7% as determined by the Karl Fischer method.

Assignments (8)
RELEASE OF SECURITY INTEREST Recorded Nov 21, 2025
From: HERCULES CAPITAL, INC., AS AGENT
To: ARETEIA THERAPEUTICS, INC.
Reel/Frame 072993/0621 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 10, 2025
From: KNOPP BIOSCIENCES LLC
To: ARETEIA THERAPEUTICS, INC.
Reel/Frame 073077/0717 →
SECURITY INTEREST Recorded Oct 10, 2025
From: ARETEIA THERAPEUTICS, INC.
To: HERCULES CAPITAL, INC., AS AGENT
Reel/Frame 072540/0980 →
RELEASE OF SECURITY INTEREST Recorded Apr 12, 2022
From: AMERICAN MONEY MANAGEMENT CORPORATION
To: KNOPP BIOSCIENCES LLC
Reel/Frame 059572/0530 →
SECURITY INTEREST Recorded Apr 12, 2021
From: KNOPP BIOSCIENCES LLC
To: AMERICAN MONEY MANAGEMENT CORPORATION
Reel/Frame 055889/0064 →
RELEASE OF SECURITY INTEREST Recorded Feb 27, 2019
From: KOPPER, RACHEL
To: KNOPP BIOSCIENCES LLC
Reel/Frame 048455/0727 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 19, 2014
From: CHEN, WEIRONG; HUMORA, MICHAEL; KWOK, DAW-IONG ALBERT; KIESMAN, WILLIAM F.; IRDAM, ERWIN AYANDRA
To: BIOGEN IDEC MA INC.
Reel/Frame 033203/0337 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jun 19, 2014
From: BIOGEN IDEC MA INC.
To: KNOPP BIOSCIENCES LLC
Reel/Frame 033143/0058 →
Continuity (2)
Provisional Application 61579188 · Dec 22, 2011
Related Publication 20150126745A1 · May 7, 2015