IP Library Granted Patent US 9,920,012
Granted Patent B2
US 9,920,012 · App. 14/403,779 · Granted Mar 20, 2018

Indazole guanidine F

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Quick Facts
Patent No.
US 9,920,012
App. No.
14/403,779
Granted
Mar 20, 2018
Kind
B2
Abstract

The invention provides indazole guanidine compounds that inhibit F 1 F 0 -ATPase, and methods of using indazole guanidine compounds as therapeutic agents to treat medical disorders, such as an immune disorder, inflammatory condition, or cancer.

Claims (360)

1. A compound represented by Formula I:

including all stereoisomers, geometric isomers, and tautomers; or a pharmaceutically acceptable salt or solvate of any of the foregoing; wherein:

A 1 is one of the following:

(i) phenyl or a six-membered heteroaryl, each of which is optionally substituted with 1,2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, C 1 -C 6 alkoxy, cyano, —CO 2 R 4 , —C(O)R 5 , —S(O)R 5 , —SO 2 R 5 , —SO 2 N(R 6 )(R 7 ), —C(O)N(R 6 )(R 7 ), —N(R 6 )(R 7 ), and —N(R 4 )C(O)(R 5 ); or

 that is optionally substituted with 1 or 2 substituents independently selected from the group consisting of halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, and C 1 -C 6 alkoxy; wherein B 1 is a 5-membered or 6-membered heterocycle;

A 2 is

 wherein B 2 is a 6-membered heteroaromatic group;

R 1 and R 2 each represent independently hydrogen or alkyl;

R 3 is one of the following:

(i) alkyl optionally substituted with 1 or 2 substituents independently selected from the group consisting of hydroxyl, alkoxyl, —O—(C(R 4 ) 2 ) m -alkoxyl, —O—(C(R 4 ) 2 ) m —OH, —N(R 6 )(R 7 ), cycloalkyl, heterocycloalkyl, —N(R 6 )C(O)R 8 , —C(O)N(R 6 )(R 7 ), —N(R 6 )C(O)N(R 6 )(R 7 ), halogen, haloalkyl, and cyano;

(ii) cycloalkyl optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, hydroxyl, cycloalkyl, hydroxyalkyl, alkoxy, —O—(C(R 4 ) 2 ) m -alkoxyl, —O—(C(R 4 ) 2 ) m —OH, and cyano; or

(iii) heterocycloalkyl optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, hydroxyl, alkyl, cycloalkyl, hydroxyalkyl, alkoxy, —O—(C(R 4 ) 2 ) m -alkoxyl, —O—(C(R 4 ) 2 ) m —OH, and cyano;

R 4 represents independently for each occurrence hydrogen, alkyl, or cycloalkyl; or two occurrences of R 4 attached to the same carbon atom are taken together with said carbon atom to form a saturated carbocylic ring;

R 5 represents independently for each occurrence alkyl or cycloalkyl;

R 6 and R 7 each represent independently for each occurrence hydrogen, alkyl, or cycloalkyl; or R 6 and R 7 are taken together with the nitrogen atom to which they are attached to form a 3 to 7 membered heterocyclic ring optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, hydroxyl, alkyl, cycloalkyl, and C 1 -C 6 alkoxy;

R 8 is hydrogen, or R 8 is alkyl substituted by hydroxyl, —N(H)(R 6 ), heterocycloalkyl, —N(H)C(O)R 10 , —C(O)N(H)(R 6 ), or —N(H)C(O)N(R 6 )(R 7 );

R 9 represents independently for each occurrence halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, C 1 -C 6 alkoxy, or cyano;

R 10 is alkyl, cycloalkyl, aryl, or aralkyl; and

n is 0, 1, 2, 3, or 4; and

m is 1, 2, 3, 4, or 5.

2. The compound of claim 1 , wherein A 1 is phenyl or a six-membered heteroaryl, each of which is optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, and C 1 -C 6 alkoxy.

3. The compound of claim 1 , wherein A 1 is phenyl substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, alkyl, and hydroxyl.

4. The compound of claim 1 , wherein A 1 is phenyl substituted with 1 or 2 substituents independently selected from the group consisting of chloro and fluoro.

5. The compound of claim 1 , wherein A 1 is one of the following:

6. The compound of claim 2 , wherein A 2 is

7. The compound of claim 2 , wherein R 8 is hydrogen.

8. The compound of claim 2 , wherein R 9 represents independently for each occurrence halogen or haloalkyl.

9. The compound of claim 6 , wherein R 9 represents independently for each occurrence chloro, fluoro, or trifluoromethyl.

10. The compound of claim 2 , wherein n is 1 or 2.

11. The compound of claim 2 , wherein A 2 is one of the following:

12. The compound of claim 2 , wherein R 3 is alkyl optionally substituted with 1 or 2 substituents independently selected from the group consisting of hydroxyl, alkoxyl, —O—(C(R 4 ) 2 ) m -alkoxyl, —O—(C(R 4 ) 2 ) m —OH, —N(R 6 )(R 7 ), and cycloalkyl.

13. The compound of claim 2 , wherein R 3 is alkyl or cycloalkyl.

14. The compound of claim 2 , wherein R 3 is C 1-6 alkyl substituted by C 1-6 alkoxyl.

15. The compound of claim 1 , wherein said compound is represented by Formula I-A1:

including all stereoisomers, geometric isomers, and tautomers; or a pharmaceutically acceptable salt or solvate of any of the foregoing; wherein:

X 1 and X 2 each represent independently hydrogen, chloro, fluoro, or —CF 3 ;

Y 1 , Y 2 , Y 3 , and Y 4 each represent independently hydrogen, chloro, fluoro, hydroxyl, or —CF 3 ; and

R* is one of the following:

(i) alkyl optionally substituted with 1 or 2 substituents independently selected from the group consisting of hydroxyl, alkoxyl, and cycloalkyl; or

(ii) cycloalkyl optionally substituted with 1 or 2 substituents independently selected from the group consisting of hydroxyl, hydroxyalkyl, and alkoxyl.

16. The compound of claim 15 , wherein X 1 and X 2 are each independently chloro or fluoro.

17. The compound of claim 16 , wherein Y 1 , Y 2 , and Y 4 are hydrogen; and Y 3 is fluoro or —CF 3 .

18. The compound of claim 16 , wherein Y 1 and Y 4 are hydrogen; and Y 2 and Y 3 are each independently fluoro or —CF 3 .

19. The compound of claim 16 , wherein R* is alkyl optionally substituted with 1 or 2 substituents independently selected from the group consisting of hydroxyl, alkoxyl, and cycloalkyl.

20. The compound of claim 16 , wherein R* is alkyl or cycloalkyl.

21. The compound of claim 16 , wherein R* is C 1-6 alkyl substituted by C 1-6 alkoxyl.

22. A compound represented by Formula III:

including all stereoisomers, geometric isomers, and tautomers; or a pharmaceutically acceptable salt or solvate of any of the foregoing; wherein:

A 1 is one of the following:

(i) phenyl or a six-membered heteroaryl, each of which is optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, C 1 -C 6 alkoxy, cyano, —CO 2 R 4 , —C(O)R 5 , —S(O)R 5 , —SO 2 R 5 , —SO 2 N(R 6 )(R 7 ), —C(O)N(R 6 )(R 7 ), —N(R 6 )(R 7 ), and —N(R 4 )C(O)(R 5 ); or

 that is optionally substituted with 1 or 2 substituents independently selected from the group consisting of halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, and C 1 -C 6 alkoxy; wherein B 1 is a 5-membered or 6-membered heterocycle;

A 2 is

 wherein B 2 is a 6-membered heteroaromatic group;

R 1 and R 2 each represent independently hydrogen or alkyl;

R 3 is one of the following:

(i) alkyl optionally substituted with 1 or 2 substituents independently selected from the group consisting of hydroxyl, alkoxyl, —O—(C(R 4 ) 2 ) m -alkoxyl, —O—(C(R 4 ) 2 ) m —OH, —N(R 6 )(R 7 ), cycloalkyl, heterocycloalkyl, —N(R 6 )C(O)R 8 , —C(O)N(R 6 )(R 7 ), —N(R 6 )C(O)N(R 6 )(R 7 ), halogen, haloalkyl, and cyano; or

(ii) cycloalkyl or heterocycloalkyl, each of which is optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, hydroxyl, alkyl, cycloalkyl, hydroxyalkyl, alkoxy, —O—(C(R 4 ) 2 ) m -alkoxyl, —O—(C(R 4 ) 2 ) m —OH, and cyano;

R 4 represents independently for each occurrence hydrogen, alkyl, or cycloalkyl; or two occurrences of R 4 attached to the same carbon atom are taken together with said carbon atom to form a saturated carbocylic ring;

R 5 represents independently for each occurrence alkyl or cycloalkyl;

R 6 and R 7 each represent independently for each occurrence hydrogen, alkyl, or cycloalkyl; or R 6 and R 7 are taken together with the nitrogen atom to which they are attached to form a 3 to 7 membered heterocyclic ring optionally substituted with 1, 2, or 3 substituents independently selected from the group consisting of halogen, haloalkyl, hydroxyl, alkyl, cycloalkyl, and C 1 -C 6 alkoxy;

R 8 is alkyl, —CH 2 —S-alkyl, —CO 2 -alkylene-Z, —CO 2 -alkyl, or —C(O)-alkyl optionally substituted by one or more of hydroxyl, halogen, and —N(R 6 )(R 7 );

R 9 represents independently for each occurrence halogen, haloalkyl, alkyl, cycloalkyl, heterocycloalkyl, hydroxyl, C 1 -C 6 alkoxy, or cyano;

Z is —O—P(O)(OH) 2 , —OC(O)-arylene-alkylene-O—P(O)(OH) 2 , —OC(O)-arylene-O—P(O)(OH) 2 , or —OC(O)-alkylene-O—P(O)(OH) 2 ;

n is 0, 1, 2, 3, or 4; and

m is 1, 2, 3, 4, or 5.

23. A compound listed in Table 1A, 2A, or 4A below, or a pharmaceutically acceptable salt thereof:

TABLE 1A

No.

A

X

Y

I-1 

3-chlorophenyl

isobutyl

I-2 

4-chlorophenyl

sec-butyl

I-3 

3-fluorophenyl

tert-butyl

I-4 

4-fluorophenyl

ethyl

I-5 

3,4-dichlorophenyl

propyl

I-6 

3,4-difluorophenyl

isopropyl

I-7 

4-trifluoromethylphenyl

—C(H)(Me)CH 2 OMe

I-8 

3-chlorophenyl

—CH 2 CH 2 OMe

I-9 

4-chlorophenyl

—CH 2 CH 2 OEt

I-10

3-fluorophenyl

cyclopropyl

I-11

4-fluorophenyl

cyclopentyl

I-12

3,4-dichlorophenyl

cyclohexyl

I-13

3,4-difluorophenyl

1-methylcyclobutyl

I-14

4-trifluoromethylphenyl

1-methylcyclopentyl

I-15

3-chlorophenyl

4-methylcyclohexyl

I-16

4-chlorophenyl

isobutyl

I-17

3-fluorophenyl

sec-butyl

I-18

4-fluorophenyl

tert-butyl

I-19

3,4-dichlorophenyl

ethyl

I-20

3,4-difluorophenyl

propyl

I-21

4-trifluoromethylphenyl

isopropyl

I-22

3-chlorophenyl

—C(H)(Me)CH 2 OMe

I-23

4-chlorophenyl

—CH 2 CH 2 OMe

I-24

3-fluorophenyl

—CH 2 CH 2 OEt

I-25

4-fluorophenyl

cyclopropyl

I-26

3,4-dichlorophenyl

cyclopentyl

I-27

3,4-difluorophenyl

cyclohexyl

I-28

4-trifluoromethylphenyl

1-methylcyclobutyl

I-29

3-chlorophenyl

1-methylcyclopentyl

I-30

4-chlorophenyl

4-methylcyclohexyl

I-31

4-hydroxyphenyl

isobutyl

I-32

4-hydroxyphenyl

sec-butyl

I-33

4-hydroxyphenyl

isopropyl

I-34

4-hydroxyphenyl

—C(H)(Me)CH 2 OMe

I-35

4-hydroxyphenyl

—C(H)(Me)CH 2 OMe

I-36

3-chlorophenyl

isobutyl

I-37

4-chlorophenyl

sec-butyl

I-38

3-fluorophenyl

tert-butyl

I-39

4-fluorophenyl

isopropyl

I-40

3-chlorophenyl

—C(H)(Me)CH 2 OMe

I-41

3-fluorophenyl

I-42

4-fluorophenyl

I-43

3,4-dichlorophenyl

I-44

3,4-difluorophenyl

I-45

3,4-difluorophenyl

I-46

3-fluorophenyl

isobutyl

I-47

4-fluorophenyl

sec-butyl

I-48

3,4-dichlorophenyl

isopropyl

I-49

3,4-difluorophenyl

—C(H)(Me)CH 2 OMe

I-50

4-trifluoromethylphenyl

—C(H)(Me)CH 2 OMe

I-51

3-chlorophenyl

isobutyl

I-52

4-chlorophenyl

1-methylcyclopentyl

I-53

3-fluorophenyl

cyclohexyl

I-54

4-hydroxyphenyl

TABLE 2A

Com-

pound

No.

Chemical Structure

A-2

A-3

A-4

A-5

A-6

A-7

A-8

A-9

A-10

A-11

A-12

A-13

A-14

A-15

A-16

A-17

A-18

A-19

A-20

A-21

A-22

A-23

A-24

A-25

A-26

A-27

A-28

A-29

A-30

A-31

A-32

A-33

A-34

A-35

A-36

A-37

A-38

A-39

A-40

A-41

A-42

A-43

A-44

A-45

A-46

A-47

A-48

A-49

A-50

A-51

A-52

A-53

A-54

A-55

A-56

A-57

A-58

A-59

A-60

A-61

A-62

A-63

A-64

A-65

A-66

A-67

A-68

A-69

A-70

A-71

A-72

A-73

A-74

A-75

A-76

A-77

A-78

A-79

A-80

A-81

A-82

A-83

A-84

A-85

A-86

A-87

A-88

A-89

A-90

A-91

A-92

A-93

A-94

A-95

A-96

A-97

A-98

A-99

A-100

A-101

A-102

A-103

A-104

A-105

A-106

A-107

A-108

A-109

A-110

A-111

A-112

A-113

A-114

A-115

A-116

TABLE 4A

Compound

No.

Chemical Structure

1

2

3

4

6

24. A pharmaceutical composition comprising a compound of claim 1 and a pharmaceutically acceptable carrier.

25. A method of treating a disorder selected from the group consisting of rheumatoid arthritis, psoriasis, chronic graft-versus-host disease, acute graft-versus-host disease, Crohn's disease, inflammatory bowel disease, multiple sclerosis, systemic lupus erythematosus, Celiac Sprue, idiopathic thrombocytopenic thrombotic purpura, myasthenia gravis, Sjogren's syndrome, scleroderma, ulcerative colitis, asthma, uveitis, and epidermal hyperplasia, comprising administering to a patient in need thereof a therapeutically effective amount of a compound of claim 1 in order to ameliorate a symptom of the disorder.

26. The method of claim 25 , wherein the patient is a human.

27. A method of inhibiting a F 1 F 0 -ATPase, comprising exposing a F 1 F 0 -ATPase to a compound of claim 1 to inhibit said F 1 F 0 -ATPase.

Assignments (2)
SECURITY INTEREST Recorded Jan 3, 2019
From: LYCERA CORP.
To: WILMINGTON TRUST, NATIONAL ASSOCIATION
Reel/Frame 048002/0201 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Jan 30, 2018
From: HURD, ALEXANDER R.; SKALITZKY, DONALD J.; TAYLOR, CLARKE B.; TOOGOOD, PETER L.; VAN HUIS, CHAD A.
To: LYCERA CORPORATION
Reel/Frame 044767/0554 →