IP Library Granted Patent US 8,999,971
Granted Patent B2
US 8,999,971 · App. 14/465,027 · Granted Apr 7, 2015

Methods for increasing the stabilization of hypoxia inducible factor-1 alpha

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Quick Facts
Patent No.
US 8,999,971
App. No.
14/465,027
Granted
Apr 7, 2015
Kind
B2
Abstract

Disclosed herein are methods for controlling the activity of hypoxia-inducible transcription factor 1-alpha (HIF-1α) and diseases, conditions, or syndromes related thereto, inter alia, Peripheral Vascular Disease (PVD), Coronary Artery Disease (CAD), heart failure, ischemia, and anemia. Further disclosed are pharmaceutical compositions comprising HIF-1α prolyl hydroxylase inhibitors useful in treating diseases, conditions, and/or syndromes related thereto the activity of HIF-1α.

Claims (140)

1. A method for inhibiting hypoxia-inducible factor-1alpha (HIF-1α) 4-prolyl hydroxylase activity in a subject, comprising administering to a subject a HIF-1α prolyl hydroxylase inhibitor having the formula:

wherein L is chosen from CH 2 or SO 2 ;

Z has the formula:

R represents from 0 to 5 substitutions for hydrogen;

the index n is an integer from 0 to 5;

R 1 and R 2 are each independently chosen from:

i) hydrogen;

ii) substituted or unsubstituted C 1 -C 10 linear, C 3 -C 10 branched, or C 3 -C 10 cyclic alkyl;

iii) substituted or unsubstituted C 2 -C 10 linear, C 3 -C 10 branched, or C 3 -C 10 cyclic alkenyl;

iv) substituted or unsubstituted C 2 -C 10 linear or C 3 -C 10 branched alkynyl;

v) substituted or unsubstituted C 6 or C 10 aryl;

vi) substituted or unsubstituted C 1 -C 9 heterocyclic;

vii) substituted or unsubstituted C 1 -C 9 heteroaryl; or

viii) R 1 and R 2 can be taken together to form a substituted or unsubstituted heterocyclic or substituted or unsubstituted heteroaryl ring having from form 2 to 20 carbon atoms and from 1 to 7 heteroatoms; or

a pharmaceutically acceptable salt thereof.

2. The method according to claim 1 , wherein L is CH 2 .

3. The method according to claim 1 , wherein L is SO 2 .

4. The method according to claim 1 , wherein each R is a substitution for hydrogen independently chosen from:

i) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl;

ii) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkenyl;

iii) substituted or unsubstituted C 2 -C 12 linear or C 3 -C 12 branched alkynyl;

iv) C 6 or C 10 substituted or unsubstituted aryl;

v) C 1 -C 9 substituted or unsubstituted heterocyclic;

vi) C 1 -C 11 substituted or unsubstituted heteroaryl;

vii) halogen;

viii) —[C(R 23a )(R 23b )] x OR 10 ;

R 10 is chosen from:

a) —H;

b) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl;

c) C 6 or C 10 substituted or unsubstituted aryl or alkylenearyl;

d) C 1 -C 9 substituted or unsubstituted heterocyclic;

e) C 1 -C 11 substituted or unsubstituted heteroaryl;

ix) —[C(R 23a )(R 23b )] x N(R 11a )(R 11b );

R 11a and R 11b are each independently chosen from:

a) —H;

b) —OR 12 ;

R 12 is hydrogen or C 1 -C 4 linear alkyl;

c) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl;

d) C 6 or C 10 substituted or unsubstituted aryl;

e) C 1 -C 9 substituted or unsubstituted heterocyclic;

f) C 1 -C 11 substituted or unsubstituted heteroaryl; or

g) R 11a and R 11b can be taken together to form a substituted or unsubstituted ring having from 3 to 10 carbon atoms and from 0 to 3 heteroatoms chosen from oxygen, nitrogen, and sulfur;

x) —[C(R 23a )(R 23b )] x C(O)R 13 ;

R 13 is:

a) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl;

b) —OR 14 ;

R 14 is hydrogen, substituted or unsubstituted C 1 -C 4 linear alkyl, C 6 or C 10 substituted or unsubstituted aryl, C 1 -C 9 substituted or unsubstituted heterocyclic, C 1 -C 11 substituted or unsubstituted heteroaryl;

c) —N(R 15a )(R 15b );

R 15a and R 15b are each independently hydrogen, substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl; C 6 or C 10 substituted or unsubstituted aryl; C 1 -C 6 substituted or unsubstituted heterocyclic; C 1 -C 11 substituted or unsubstituted heteroaryl; or R 15a and R 15b can be taken together to form a substituted or unsubstituted ring having from 3 to 10 carbon atoms and from 0 to 3 heteroatoms chosen from oxygen, nitrogen, and sulfur;

xi) —[C(R 23a )(R 23b )] x OC(O)R 16 ;

R 16 is:

a) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl;

b) —N(R 17a )(R 17b );

R 17a and R 17b are each independently hydrogen, substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl; C 6 or C 10 substituted or unsubstituted aryl; C 1 -C 6 substituted or unsubstituted heterocyclic; C 1 -C 11 substituted or unsubstituted heteroaryl; or R 17a and R 17b can be taken together to form a substituted or unsubstituted ring having from 3 to 10 carbon atoms and from 0 to 3 heteroatoms chosen from oxygen, nitrogen, and sulfur;

xii) —[C(R 23a )(R 23b )] x NR 18 C(O)R 19 ;

R 18 is:

a) —H; or

b) substituted or unsubstituted C 1 -C 4 linear, C 3 -C 4 branched, or C 3 -C 4 cyclic alkyl;

R 19 is:

a) substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl;

b) N(R 20a )(R 20b );

R 20a and R 20b are each independently hydrogen, substituted or unsubstituted C 1 -C 12 linear, C 3 -C 12 branched, or C 3 -C 12 cyclic alkyl; C 6 or C 10 substituted or unsubstituted aryl; C 1 -C 9 substituted or unsubstituted heterocyclic; C 1 -C 11 substituted or unsubstituted heteroaryl; or R 20a and R 20b can be taken together to form a substituted or unsubstituted ring having from 3 to 10 carbon atoms and from 0 to 3 heteroatoms chosen from oxygen, nitrogen, and sulfur;

xiii) —[C(R 23a )(R 23b )] x CN;

xiv) —[C(R 23a )(R 23b )] x NO 2 ;

xv) —[C(R 23a )(R 23b )] x R 21 ;

R 21 is C 1 -C 10 linear, branched, or cyclic alkyl substituted by from 1 to 21 halogen atoms chosen from —F, —Cl, —Br, or —I;

xvi) —[C(R 23a )(R 23b )] x SO 2 R 22 ;

R 22 is hydrogen, hydroxyl, substituted or unsubstituted C 1 -C 4 linear or C 3 -C 4 branched alkyl; substituted or unsubstituted C 6 , C 10 , or C 1-4 aryl; C 7 -C 15 alkylenearyl; C 1 -C 9 substituted or unsubstituted heterocyclic; or C 1 -C 11 substituted or unsubstituted heteroaryl;

R 23a and R 23b are each independently hydrogen or C 1 -C 4 alkyl; and

the index x is an integer from 0 to 5.

5. The method according to claim 1 , wherein Z is 4-chlorophenyl.

6. The method according to claim 1 , wherein Z is chosen from 2-chlorophenyl, 3-chlorophenyl, 2-fluorophenyl, 3-fluorophenyl, or 4-fluorophenyl.

7. The method according to claim 1 , wherein the HIF-1α prolyl hydroxylase inhibitor is chosen from:

1-Benzyl-3-hydroxy-4-(piperidin-1-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(morpholin-4-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(thiomorpholin-4-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(thiazolidin-3-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(pyrrolidin-1-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(4-benzylpiperidin-1-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(4-benzylpiperazin-1-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(3-hydroxypyrrolidin-1-yl)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(1,4-dioxa-8-azaspiro[4,5]dec-8-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-azepan-1-ylmethylpyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(azocan-1-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-(1,4′-bipiperidinyl-1′-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(3,4-dihydroquinolin-1(2H)-yl)methyl]pyridin-2(1H)-one;

Methyl 1-[(1-benzyl-3-hydroxy-2-oxo-1,2-dihydropyridin-4-yl)methyl]pyrrolidine-2-carboxylate;

1-Benzyl-3-hydroxy-4-{[2-(methoxymethyl)pyrrolidin-1-yl]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-{[2-(pyrdin-2-yl)pyrrolidin-1-yl]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[4-(6-chloropyridazin-3-yl)piperazin-1-ylmethyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[4-(2-methoxyphenyl)piperazin-1-ylmethyl]pyridin-2(1H)-one;

1-(3-Methoxybenzyl)-3-hydroxy-4-(piperidin-1-ylmethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-{[3-(1-H-imidazol-1-yl)propylamino]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(benzylaminomethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-{[(2-(pyridin-2-yl)ethylamino]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-{[(tetrahydrofuran-2-ylmethyl)amino]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(2-methoxyethylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(1-hydroxy-2-methylpropan-2-ylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(pyridin-4-ylmethylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy 4-{[(furan-2-ylmethyl)amino]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-{[2-(methylthio)ethylamino]methyl}pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(4-methoxybenzylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(1-phenylethylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-(cycloheptylaminomethyl)pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(4-methylcyclohexylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[(1-benzylpiperidin-4-ylamino)methyl]pyridin-2(1H)-one;

3-[(1-Benzyl-3-hydroxy-2-oxo-1,2-dihydropyridin-4-yl)methylamino]azepan-2-one;

1-Benzyl-3-hydroxy-4-[(1-benzylpyrrolidin-3-ylamino)methyl]pyridin-2(1H)-one;

(R)-1-Benzyl-3-hydroxy-4-[(1-phenylethylamino)methyl]pyridin-2(1H)-one;

1-Benzyl-3-hydroxy-4-[([1,3]dioxolan-2-ylmethylmethylamino)methyl]pyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-(pyrrolidin-1-ylmethyl)pyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-thiazolidin-3-ylmethylpyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-azocan-1ylmethylpyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-(4-phenylpiperazin-1-ylmethyl)-pyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-[1,4′]bipiperidinyl-1′-ylmethylpyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-[4-(6-chloropyridazin-3-yl)piperazin-1-ylmethyl]pyridin-2(1H)-one;

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-(benzylaminomethyl)pyridin-2(1H)-one; or

1-(4′-Methylbenzenesulfonyl)-3-hydroxy-4-[(2-methoxyethylamino)methyl]-pyridin-2(1H)-one.

8. The method according to claim 1 , wherein the wherein the HIF-1α prolyl hydroxylase inhibitor has the formula:

wherein Z is phenyl substituted with from 1 to 5 halogens chosen from fluorine and chlorine;

R 4 is C 1 -C 4 linear alkyl or C 3 -C 4 branched alkyl;

or a pharmaceutically acceptable salt thereof.

9. The method according to claim 8 , wherein R 4 is tert-butyl.

10. The method according to claim 8 , wherein Z is 4-chlorophenyl.

11. The method according to claim 8 , wherein the one or more compounds is tert-butyl 4-{[1-(4-chlorobenzyl)-3-hydroxy-2-oxo-1,2-dihydropyridin-4-yl]methyl}-piperazine-1-carboxylate or a pharmaceutically acceptable salt chosen from hydrochloride salt, hydrogen sulfate salt, sulfate salt, p-toluenesulfonyl salt, methansulfonyl salt and mixtures thereof.

12. The method according to claim 1 , wherein the subject has an inflammatory disease.

13. The method according to claim 1 , wherein the subject has a medical condition causing a decreased cellular immunity.

14. The method according to claim 13 , wherein the medical condition is cancer.

15. A method for increasing the cellular immune response of a subject having an inflammatory disease, comprising administering to a subject an effective amount of a HIF-1α prolyl hydroxylase inhibitor having the formula:

wherein Z is phenyl substituted with from 1 to 5 halogens chosen from fluorine and chlorine;

R 4 is C 1 -C 4 linear alkyl or C 3 -C 4 branched alkyl;

or a pharmaceutically acceptable salt thereof.

16. The method according to claim 15 , wherein the compound is tert-butyl 4-{[1-(4-chlorobenzyl)-3-hydroxy-2-oxo-1,2-dihydropyridin-4-yl]methyl}-piperazine-1-carboxylate or a pharmaceutically acceptable salt chosen from hydrochloride salt, hydrogen sulfate salt, sulfate salt, p-toluenesulfonyl salt, methansulfonyl salt and mixtures.

17. A method of controlling the immune response in a subject having an inflammatory disease, comprising administering to the subject a HIF-1α prolyl hydroxylase inhibitor having the formula:

wherein Z is phenyl substituted with from 1 to 5 halogens chosen from fluorine and chlorine;

R 4 is C 1 -C 4 linear alkyl or C 3 -C 4 branched alkyl; or

a pharmaceutically acceptable salt thereof.

18. The method according to claim 17 , wherein R 4 is tert-butyl.

19. The method according to claim 17 , wherein Z is 4-chlorophenyl.

20. The method according to claim 17 , wherein the one or more compounds is tert-butyl 4-{[1-(4-chlorobenzyl)-3-hydroxy-2-oxo-1,2-dihydropyridin-4-yl]methyl}-piperazine-1-carboxylate or a pharmaceutically acceptable salt chosen from hydrochloride salt, hydrogen sulfate salt, sulfate salt, p-toluenesulfonyl salt, methansulfonyl salt and mixtures thereof.

Assignments (7)
CHANGE OF NAME Recorded Jul 31, 2019
From: AERPIO THERAPEUTICS, INC.
To: AERPIO THERAPEUTICS LLC
Reel/Frame 049919/0032 →
CORRECTIVE ASSIGNMENT TO CORRECT THE CORRECT TYPOGRAPHICAL ERROR AND ADD ","AFTER AERPIO THERAPEUTICS AND BEFORE INC. PREVIOUSLY RECORDED ON REEL 034529 FRAME 0781. ASSIGNOR(S) HEREBY CONFIRMS THE ASSIGNMENT. Recorded Jul 15, 2019
From: SHALWITZ, ROBERT; GARDNER, JOSEPH H.
To: AERPIO THERAPEUTICS, INC.
Reel/Frame 049752/0496 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 9, 2018
From: AKEBIA THERAPEUTICS, INC.
To: AERPIO THERAPEUTICS, INC.
Reel/Frame 047111/0497 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 9, 2018
From: WARNER CHILCOTT COMPANY, LLC
To: AKEBIA THERAPEUTICS, INC
Reel/Frame 047642/0695 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 9, 2018
From: THE PROCTOR & GAMBLE COMPANY
To: WARNER CHILCOTT COMPANY, LLC
Reel/Frame 047111/0079 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Oct 9, 2018
From: WU, SHENGDE
To: THE PROCTOR & GAMBLE COMPANY
Reel/Frame 047110/0896 →
ASSIGNMENT OF ASSIGNOR'S INTEREST Recorded Dec 17, 2014
From: GARDNER, JOSEPH; SHALWITZ, ROBERT
To: AERPIO THERAPEUTICS INC.
Reel/Frame 034529/0781 →